Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 5.7e-69 264.2 143 100.0
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 1.5e-48 196.4 141 71.6
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 2.7e-47 192.2 142 68.3
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 8.0e-47 190.7 142 67.6
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 1.5e-45 186.4 142 66.2
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 1.5e-45 186.4 144 68.8
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.5e-45 186.4 142 69.0
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 1.5e-45 186.4 142 66.9
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 5.7e-45 184.5 142 66.9
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 2.8e-44 182.2 142 64.8
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 1.2e-42 176.8 148 64.2
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.6e-42 176.4 142 62.0
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 3.5e-42 175.3 144 62.5
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 3.5e-42 175.3 137 66.4
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 4.5e-42 174.9 142 64.1
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 4.5e-42 174.9 145 64.1
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 5.9e-42 174.5 144 59.7
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 7.7e-42 174.1 148 63.5
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 1.0e-41 173.7 144 64.6
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.0e-41 173.7 142 61.3
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 1.7e-41 172.9 144 59.0
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 1.7e-41 172.9 142 66.2
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 5.0e-41 171.4 143 61.5
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 6.5e-41 171.0 143 62.9
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 6.5e-41 171.0 145 60.7
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.1e-40 170.2 144 64.6
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 3.3e-40 168.7 145 58.6
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 3.3e-40 168.7 144 59.0
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 3.3e-40 168.7 144 59.0
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 4.2e-40 168.3 143 64.3
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 7.2e-40 167.5 144 58.3
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 7.2e-40 167.5 144 58.3
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 9.5e-40 167.2 144 58.3
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 9.5e-40 167.2 144 58.3
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 9.5e-40 167.2 144 58.3
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 9.5e-40 167.2 142 61.3
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 1.6e-39 166.4 143 61.5
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 2.8e-39 165.6 142 64.1
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 2.8e-39 165.6 144 59.7
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 8.0e-39 164.1 144 61.8
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.4e-38 163.3 147 56.5
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 1.4e-38 163.3 143 58.0
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 1.8e-38 162.9 142 61.3
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.8e-38 162.9 143 59.4
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 2.3e-38 162.5 141 59.6
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 3.0e-38 162.2 143 58.7
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 5.2e-38 161.4 148 58.1
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 6.8e-38 161.0 143 60.1
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 8.9e-38 160.6 144 61.1
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 8.9e-38 160.6 149 55.7
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 1.2e-37 160.2 150 56.0
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 3.4e-37 158.7 145 59.3
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 4.4e-37 158.3 149 55.0
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 5.7e-37 157.9 143 57.3
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 5.7e-37 157.9 143 58.0
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 7.5e-37 157.5 147 55.1
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 1.7e-36 156.4 150 54.7
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 1.7e-36 156.4 148 56.8
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 1.7e-36 156.4 153 56.2
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 2.8e-36 155.6 144 56.2
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 1.1e-35 153.7 146 56.2
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 5.4e-35 151.4 143 55.9
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 9.2e-35 150.6 146 54.8
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 9.2e-35 150.6 137 56.9
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 9.2e-35 150.6 146 54.1
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 1.2e-34 150.2 153 54.2
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 1.2e-34 150.2 146 54.1
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 1.2e-34 150.2 146 54.1
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 2.0e-34 149.4 144 55.6
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 2.0e-34 149.4 146 55.5
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 2.7e-34 149.1 143 55.2
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 2.7e-34 149.1 137 56.9
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 4.5e-34 148.3 140 58.6
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 1.3e-33 146.7 162 50.0
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 1.7e-33 146.4 180 50.0
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 8.6e-33 144.1 156 50.0
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 4.3e-32 141.7 106 64.2
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 5.6e-32 141.4 146 52.1
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 1.6e-31 139.8 146 51.4
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 1.2e-29 133.7 144 50.7
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 7.5e-29 131.0 95 68.4
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 3.2e-27 125.6 110 60.0
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.0e-26 122.9 98 65.3
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.3e-25 120.2 140 47.9
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.3e-25 120.2 140 47.9
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.3e-25 119.4 93 63.4
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 3.9e-25 118.6 124 51.6
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 6.6e-25 117.9 143 51.7
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.1e-24 117.1 109 59.6
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 1.9e-24 116.3 99 55.6
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 7.3e-24 114.4 146 50.7
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.6e-23 113.2 92 64.1
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 5.2e-22 108.2 140 41.4
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 5.2e-22 108.2 108 60.2
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 6.8e-22 107.8 148 45.9
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 4.9e-20 101.7 128 46.9
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 3.0e-17 92.4 129 41.9
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 3.3e-16 89.0 90 48.9
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 6.2e-15 84.7 115 41.7
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 6.4e-12 74.7 81 51.9
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 1.4e-11 73.6 89 48.3
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 1.9e-11 73.2 88 50.0
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 1.2e-10 70.5 161 34.2
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 3.6e-07 58.9 133 36.1
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 4.7e-07 58.5 72 45.8
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 4.0e-06 55.5 55 49.1


User provided reference genes

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