Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03312 Eucalyptus grandis HOM05D002105 ORTHO05D001271 8.1e-102 374.0 228 100.0
Haze_09432 Corylus avellana HOM05D001020 ORTHO05D001137 7.0e-21 105.1 232 37.1
QL08p022033 Quercus lobata HOM05D002105 ORTHO05D001271 2.7e-20 103.2 229 38.0
Gohir.A04G030600 Gossypium hirsutum HOM05D002105 ORTHO05D001271 1.5e-18 97.4 232 38.4
CANSAT56G3600 Cannabis sativa HOM05D002105 ORTHO05D001271 5.6e-18 95.5 212 35.8
Gohir.D05G355175 Gossypium hirsutum HOM05D002105 ORTHO05D001271 1.6e-17 94.0 227 37.4
Gohir.D05G355400 Gossypium hirsutum HOM05D002105 ORTHO05D001271 3.6e-17 92.8 243 35.0
Gorai.009G387800 Gossypium raimondii HOM05D002105 ORTHO05D001271 3.6e-17 92.8 243 35.0
TAR624G0920 Trochodendron aralioides HOM05D002105 ORTHO05D001271 6.2e-17 92.0 230 35.2
Potri.001G399400 Populus trichocarpa HOM05D002105 ORTHO05D001271 1.1e-16 91.3 208 38.0
Gohir.D05G355100 Gossypium hirsutum HOM05D002105 ORTHO05D001271 1.4e-16 90.9 204 37.7
Sed0026326 Sechium edule HOM05D002105 ORTHO05D001271 1.4e-16 90.9 227 35.7
Sabra11G0104100 Salix brachista HOM05D002105 ORTHO05D001271 4.0e-16 89.4 207 36.2
Lj3g0009937 Lotus japonicus HOM05D002105 ORTHO05D001271 6.8e-16 88.6 207 33.3
Duzib170G0794 Durio zibethinus HOM05D002105 ORTHO05D001271 1.2e-15 87.8 206 36.4
TWI38G1694 Tripterygium wilfordii HOM05D002105 ORTHO05D001271 1.5e-15 87.4 207 34.8
Glyma.13G276500 Glycine max HOM05D002105 ORTHO05D001271 2.6e-15 86.7 206 33.5
Thecc.07G090000 Theobroma cacao HOM05D002105 ORTHO05D001271 2.6e-15 86.7 209 35.9
Potri.011G119700 Populus trichocarpa HOM05D002105 ORTHO05D001271 3.4e-15 86.3 208 35.1
Sabra16G0261900 Salix brachista HOM05D002105 ORTHO05D001271 5.8e-15 85.5 208 36.1
CiPaw.12G118700 Carya illinoinensis HOM05D002105 ORTHO05D001271 1.7e-14 84.0 214 33.2
Manes.03G109600 Manihot esculenta HOM05D002105 ORTHO05D001271 2.2e-14 83.6 224 34.8
CSS0000814 Camellia sinensis var. sinensis HOM05D002105 ORTHO05D001271 2.9e-14 83.2 222 39.2
CSS0030542 Camellia sinensis var. sinensis HOM05D002105 ORTHO05D001271 1.9e-13 80.5 224 34.8
MELO3C016696.2 Cucumis melo HOM05D002105 ORTHO05D001271 1.9e-13 80.5 227 35.7
Nitab4.5_0001241g0060 Nicotiana tabacum HOM05D002105 ORTHO05D001271 1.9e-13 80.5 227 32.6
Dinv20177 Davidia involucrata HOM05D002105 ORTHO05D001271 2.4e-13 80.1 221 37.6
Aqoxy1G02397 Aquilegia oxysepala HOM05D002105 ORTHO05D001271 4.1e-13 79.3 209 32.5
Hma1.2p1_0531F.1_g173370 Hydrangea macrophylla HOM05D002105 ORTHO05D001271 7.1e-13 78.6 221 38.0
TAR626G1709 Trochodendron aralioides HOM05D002105 ORTHO05D001271 9.2e-13 78.2 227 32.2
CiPaw.11G170100 Carya illinoinensis HOM05D002105 ORTHO05D001271 1.2e-12 77.8 201 33.8
Lalb_Chr25g0286341 Lupinus albus HOM05D002105 ORTHO05D001271 1.2e-12 77.8 209 33.0
Sc03g0010070 Simmondsia chinensis HOM05D002105 ORTHO05D001271 1.2e-12 77.8 221 38.9
Oeu051068.1 Olea europaea HOM05D002105 ORTHO05D001271 1.6e-12 77.4 205 33.2
VMungo1080G0407 Vigna mungo HOM05D002105 ORTHO05D001271 6.0e-12 75.5 206 34.5
Cpa.g.sc80.67 Carica papaya HOM05D002105 ORTHO05D001271 7.8e-12 75.1 189 36.5
PGR083G2752 Punica granatum HOM05D002105 ORTHO05D001271 7.8e-12 75.1 205 34.1
vmacro09530 Vaccinium macrocarpon HOM05D002105 ORTHO05D001271 7.8e-12 75.1 231 31.2
Phvul.005G072500 Phaseolus vulgaris HOM05D002105 ORTHO05D001271 1.0e-11 74.7 206 29.1
MBI07_g30189_MAGBIO Magnolia biondii HOM05D002105 ORTHO05D001271 1.3e-11 74.3 209 32.5
Manes.15G087400 Manihot esculenta HOM05D002105 ORTHO05D001271 1.3e-11 74.3 205 30.7
Oeu005407.1 Olea europaea HOM05D002105 ORTHO05D001271 1.3e-11 74.3 206 35.9
Lalb_Chr20g0109631 Lupinus albus HOM05D002105 ORTHO05D001271 1.7e-11 73.9 206 32.0
Gohir.D13G150900 Gossypium hirsutum HOM05D002105 ORTHO05D001271 2.3e-11 73.6 203 33.5
Lalb_Chr03g0030651 Lupinus albus HOM05D002105 ORTHO05D001271 2.3e-11 73.6 211 31.8
Ca_01848_v3 Cicer arietinum L. HOM05D002105 ORTHO05D001271 3.0e-11 73.2 208 32.2
Gohir.A13G146000 Gossypium hirsutum HOM05D002105 ORTHO05D001271 3.0e-11 73.2 203 33.5
arahy.Tifrunner.gnm1.ann1.FLJ2SC Arachis hypogaea HOM05D002105 ORTHO05D001271 5.1e-11 72.4 207 33.3
Hma1.2p1_0898F.1_g234460 Hydrangea macrophylla HOM05D002105 ORTHO05D001271 5.1e-11 72.4 213 30.5
arahy.Tifrunner.gnm1.ann1.Y2CVLD Arachis hypogaea HOM05D002105 ORTHO05D001271 6.6e-11 72.0 208 35.1
Nitab4.5_0001336g0080 Nicotiana tabacum HOM05D002105 ORTHO05D001271 6.6e-11 72.0 242 31.8
Dinv04301 Davidia involucrata HOM05D002105 ORTHO05D001271 1.5e-10 70.9 206 35.9
Cc05_g11980 Coffea canephora HOM05D002105 ORTHO05D001271 1.9e-10 70.5 229 32.8
Dinv03896 Davidia involucrata HOM05D002105 ORTHO05D001271 1.9e-10 70.5 206 35.9
Gorai.013G168900 Gossypium raimondii HOM05D002105 ORTHO05D001271 1.9e-10 70.5 231 32.9
Phvul.011G158400 Phaseolus vulgaris HOM05D002105 ORTHO05D001271 1.9e-10 70.5 209 32.5
Sed0025666 Sechium edule HOM05D002105 ORTHO05D001271 1.9e-10 70.5 208 32.7
Glyma.06G240500 Glycine max HOM05D002105 ORTHO05D001271 2.5e-10 70.1 205 31.7
COL.COLO4_27176 Corchorus olitorius HOM05D002105 ORTHO05D001271 3.3e-10 69.7 204 40.2
Oeu019314.1 Olea europaea HOM05D002105 ORTHO05D001271 3.3e-10 69.7 238 30.7
CDE08G0095 Ceratophyllum demersum HOM05D002105 ORTHO05D001271 4.3e-10 69.3 228 31.6
HPP92_028219 Vanilla planifolia HOM05D002105 ORTHO05D001271 4.3e-10 69.3 217 31.8
ATR0737G090 Amborella trichopoda HOM05D002105 ORTHO05D001271 7.3e-10 68.6 224 31.7
Nitab4.5_0000332g0070 Nicotiana tabacum HOM05D002105 ORTHO05D001271 7.3e-10 68.6 235 31.5
Glyma.12G224800 Glycine max HOM05D002105 ORTHO05D001271 1.2e-09 67.8 206 34.5
SalBow7G4171 Salvia bowleyana HOM05D002105 ORTHO05D001271 1.6e-09 67.4 226 33.6
TPR.G39006 Trifolium pratense HOM05D002105 ORTHO05D001271 2.1e-09 67.0 212 35.4
Lj1C842G6 Lonicera japonica HOM05D002105 ORTHO05D001271 2.8e-09 66.6 206 31.1
AT4G27500 Arabidopsis thaliana HOM05D002105 ORTHO05D001271 4.7e-09 65.9 207 30.4
Lalb_Chr19g0134171 Lupinus albus HOM05D002105 ORTHO05D001271 4.7e-09 65.9 209 29.7
TWI39G0142 Tripterygium wilfordii HOM05D002105 ORTHO05D001271 4.7e-09 65.9 216 30.6
CAN.G162.54 Capsicum annuum HOM05D002105 ORTHO05D001271 6.2e-09 65.5 227 31.7
BcaB03g12536 Brassica carinata HOM05D002105 ORTHO05D001271 1.1e-08 64.7 221 30.8
Cfa020580 Carpinus fangiana HOM05D002105 ORTHO05D001271 1.1e-08 64.7 173 28.9
CAN.G213.8 Capsicum annuum HOM05D002105 ORTHO05D001271 1.4e-08 64.3 208 32.2
Gohir.A01G063400 Gossypium hirsutum HOM05D002105 ORTHO05D001271 1.4e-08 64.3 205 30.7
HPP92_024062 Vanilla planifolia HOM05D002105 ORTHO05D001271 1.4e-08 64.3 222 29.3
CsaV3_4G033670 Cucumis sativus L. HOM05D002105 ORTHO05D001271 1.8e-08 63.9 208 32.7
Peaxi162Scf00000g03512 Petunia axillaris HOM05D002105 ORTHO05D001271 1.8e-08 63.9 206 31.1
FAN16G0257 Fragaria x ananassa HOM05D002105 ORTHO05D001271 2.3e-08 63.5 205 31.2
Lj3g0008045 Lotus japonicus HOM05D002105 ORTHO05D001271 2.3e-08 63.5 207 30.0
arahy.Tifrunner.gnm1.ann1.92S0K9 Arachis hypogaea HOM05D002105 ORTHO05D001271 3.1e-08 63.2 206 30.1
ECA240G0380 Erigeron canadensis HOM05D002105 ORTHO05D001271 3.1e-08 63.2 206 35.0
arahy.Tifrunner.gnm1.ann1.E3CL15 Arachis hypogaea HOM05D002105 ORTHO05D001271 4.0e-08 62.8 206 30.1
FvH4_3g19880 Fragaria vesca HOM05D002105 ORTHO05D001271 6.8e-08 62.0 209 29.7
THA.LOC104813390 Tarenaya hassleriana HOM05D002105 ORTHO05D001271 6.8e-08 62.0 211 29.9
FAN11G1959 Fragaria x ananassa HOM05D002105 ORTHO05D001271 8.9e-08 61.6 209 29.7
Psat5g243840 Pisum sativum HOM05D002105 ORTHO05D001271 1.2e-07 61.2 208 28.8
RcHm_v2.0_Chr5g0033561 Rosa chinensis HOM05D002105 ORTHO05D001271 1.2e-07 61.2 205 30.2
PGSC0003DMG400012445 Solanum tuberosum HOM05D002105 ORTHO05D001271 1.2e-07 61.2 206 29.1
TAR627G1018 Trochodendron aralioides HOM05D002105 ORTHO05D001271 1.2e-07 61.2 196 32.7
FAN25G0802 Fragaria x ananassa HOM05D002105 ORTHO05D001271 1.5e-07 60.8 208 30.3
Medtr2g085330 Medicago truncatula HOM05D002105 ORTHO05D001271 1.5e-07 60.8 215 33.0
PSO541G4007 Papaver somniferum HOM05D002105 ORTHO05D001271 1.5e-07 60.8 209 31.1
Gohir.D01G049800 Gossypium hirsutum HOM05D002105 ORTHO05D001271 2.6e-07 60.1 205 32.2
Gorai.002G069700 Gossypium raimondii HOM05D002105 ORTHO05D001271 4.4e-07 59.3 229 33.2
MD03G1228300 Malus domestica HOM05D002105 ORTHO05D001271 5.8e-07 58.9 205 26.8
PSO675G3374 Papaver somniferum HOM05D002105 ORTHO05D001271 5.8e-07 58.9 209 31.1
Prupe.4G180600 Prunus persica HOM05D002105 ORTHO05D001271 5.8e-07 58.9 198 26.3
Sopen07g031290 Solanum pennellii HOM05D002105 ORTHO05D001271 5.8e-07 58.9 206 29.1
AL7G25270 Arabidopsis lyrata HOM05D002105 ORTHO05D001271 9.9e-07 58.2 206 28.6
SEGI_21183 Sequoiadendron giganteum HOM05D002105 ORTHO05D001271 1.3e-06 57.8 221 29.0
VMungo1127G2095 Vigna mungo HOM05D002105 ORTHO05D001271 1.3e-06 57.8 205 27.8
BolC3t17036H Brassica oleracea HOM05D002105 ORTHO05D001271 1.7e-06 57.4 50 74.0
Carub.0007s1335 Capsella rubella HOM05D002105 ORTHO05D001271 1.7e-06 57.4 207 29.0
Lj8A155G95 Lonicera japonica HOM05D002105 ORTHO05D001271 1.7e-06 57.4 210 32.9
FAN21G0480 Fragaria x ananassa HOM05D002105 ORTHO05D001271 2.2e-06 57.0 208 28.8
BcaC01g03882 Brassica carinata HOM05D002105 ORTHO05D001271 2.9e-06 56.6 50 72.0
C03p47610 Brassica napus HOM05D002105 ORTHO05D001271 2.9e-06 56.6 50 72.0
Migut.H01943 Erythranthe guttata HOM05D002105 ORTHO05D001271 2.9e-06 56.6 206 34.0
Sp1g39660 Schrenkiella parvula HOM05D002105 ORTHO05D001271 4.9e-06 55.8 51 68.6
GSVIVG01014330001 Vitis vinifera HOM05D002105 ORTHO05D001271 4.9e-06 55.8 102 34.3
Aa31LG10G2020 Aethionema arabicum HOM05D002105 ORTHO05D001271 6.4e-06 55.5 195 28.7
DCAR_020991 Daucus carota HOM05D002105 ORTHO05D001271 6.4e-06 55.5 217 30.9
Rhsim04G0021400 Rhododendron simsii HOM05D002105 ORTHO05D001271 6.4e-06 55.5 236 29.2
BraA08t34001Z Brassica rapa HOM05D002105 ORTHO05D001271 8.4e-06 55.1 215 28.8
Sopen12g007180 Solanum pennellii HOM05D002105 ORTHO05D001271 8.4e-06 55.1 206 36.4


User provided reference genes

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