Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 0.0e+00 1253.8 624 100.0
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 6.8e-167 591.7 624 53.4
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 3.3e-153 546.2 586 51.0
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 1.2e-144 517.7 583 50.3
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 3.6e-144 516.2 636 46.9
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 4.7e-144 515.8 626 47.9
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 1.4e-143 514.2 603 47.6
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 7.6e-142 508.4 584 48.3
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 4.1e-140 502.7 633 46.0
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 6.0e-139 498.8 629 46.7
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 1.0e-138 498.0 624 46.0
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 4.3e-137 492.7 677 43.3
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 3.6e-136 489.6 614 47.1
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 2.4e-135 486.9 633 46.4
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 4.0e-135 486.1 622 46.3
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 5.2e-135 485.7 594 48.7
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 2.6e-134 483.4 631 44.5
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 6.4e-133 478.8 608 45.4
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 1.4e-132 477.6 611 44.7
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 2.4e-132 476.9 617 45.7
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 3.2e-132 476.5 607 45.0
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 1.6e-131 474.2 636 45.4
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 2.3e-130 470.3 621 45.7
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 8.7e-130 468.4 585 45.6
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 1.9e-129 467.2 612 45.6
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.5e-129 466.8 624 44.7
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 2.1e-128 463.8 585 45.1
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 1.4e-127 461.1 585 45.5
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 1.5e-126 457.6 681 41.1
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 4.4e-126 456.1 686 41.5
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 2.2e-125 453.8 621 44.1
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 2.9e-125 453.4 623 45.1
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 1.1e-124 451.4 612 45.1
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 2.4e-124 450.3 626 43.3
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 2.4e-124 450.3 580 45.7
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 9.3e-124 448.4 603 45.3
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.6e-123 447.6 605 45.3
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 2.1e-123 447.2 621 44.8
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 3.5e-123 446.4 619 44.1
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 1.3e-122 444.5 705 39.0
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 3.0e-122 443.4 612 44.0
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 8.1e-120 435.3 608 43.3
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 1.8e-119 434.1 621 42.7
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 2.4e-119 433.7 620 42.9
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 9.0e-119 431.8 613 43.4
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 9.0e-119 431.8 621 42.5
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 2.6e-118 430.3 579 44.0
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 1.9e-116 424.1 621 40.4
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 2.4e-116 423.7 622 41.8
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 2.4e-116 423.7 581 41.8
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 7.1e-116 422.2 596 41.4
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 2.7e-115 420.2 589 42.4
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 4.6e-115 419.5 631 40.6
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 1.0e-114 418.3 591 42.0
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 8.7e-114 415.2 626 41.5
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 1.6e-112 411.0 591 41.1
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.1e-111 408.3 621 42.8
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 4.9e-109 399.4 637 38.9
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 1.4e-108 397.9 590 40.3
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 7.1e-108 395.6 571 41.9
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 2.1e-107 394.0 609 40.6
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 2.3e-106 390.6 629 39.3
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 6.9e-103 379.0 549 39.0
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 9.0e-103 378.6 554 39.9
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 7.6e-102 375.6 644 38.5
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 3.5e-99 366.7 606 38.6
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 2.3e-98 364.0 582 38.8
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 5.1e-98 362.8 437 46.0
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 3.3e-97 360.1 530 40.2
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 1.6e-96 357.8 588 38.6
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 2.8e-96 357.1 594 38.2
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 2.0e-94 350.9 514 39.9
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 7.7e-94 349.0 735 34.6
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 5.5e-92 342.8 502 40.2
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 1.1e-89 335.1 510 39.6
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 2.0e-89 334.3 608 36.8
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 4.3e-89 333.2 621 35.6
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 6.3e-88 329.3 613 35.6
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 1.8e-87 327.8 631 38.4
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 2.4e-87 327.4 601 35.9
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 2.4e-87 327.4 588 36.9
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 7.7e-86 322.4 607 34.3
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 8.5e-85 318.9 611 34.2
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 2.5e-84 317.4 496 39.5
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 5.5e-84 316.2 602 36.2
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 3.6e-83 313.5 577 37.1
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 6.1e-83 312.8 578 36.9
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 6.1e-83 312.8 578 36.7
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 1.4e-82 311.6 600 36.3
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 3.9e-82 310.1 476 41.2
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 2.0e-81 307.8 285 53.0
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 7.4e-81 305.8 624 35.1
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 7.4e-81 305.8 624 35.1
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 2.2e-77 294.3 575 35.8
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 1.9e-76 291.2 564 33.9
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 5.5e-76 289.7 558 36.7
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 1.6e-75 288.1 569 34.8
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 2.7e-75 287.3 407 40.3
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 4.0e-74 283.5 583 33.1
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 7.5e-73 279.3 578 33.2
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 2.3e-66 257.7 216 56.0
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 2.3e-66 257.7 570 33.2
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 1.2e-65 255.4 486 35.6
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 2.0e-65 254.6 240 52.1
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 1.4e-63 248.4 425 39.5
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 5.9e-62 243.0 548 31.0
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.0e-61 242.3 257 44.7
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 2.2e-61 241.1 330 40.9
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 2.5e-60 237.7 429 38.9
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 1.2e-59 235.3 431 35.5
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 2.7e-59 234.2 289 43.6
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 1.2e-51 208.8 287 41.8
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 2.1e-51 208.0 396 36.1
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 6.1e-51 206.5 440 33.2
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 8.0e-51 206.1 443 34.1
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 3.4e-49 200.7 526 32.3
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 3.0e-45 187.6 426 35.0
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 1.2e-43 182.2 183 49.2
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 8.9e-42 176.0 223 43.0
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 2.2e-40 171.4 238 41.2
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 2.2e-40 171.4 584 27.4
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 8.3e-40 169.5 163 50.9
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 2.7e-38 164.5 161 49.7
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 1.0e-37 162.5 200 45.5
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 3.0e-37 161.0 190 48.9
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 1.1e-36 159.1 240 37.5
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 8.9e-34 149.4 583 26.2
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 2.6e-33 147.9 296 35.8
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 6.4e-32 143.3 157 45.9
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 6.6e-29 133.3 167 41.9
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 1.5e-28 132.1 297 28.6
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 3.6e-27 127.5 139 48.9
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 5.2e-26 123.6 259 34.4
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 4.0e-18 97.4 132 37.1
SHI27676 Sapria himalayana HOM05D004843 ORTHO05D005833 1.6e-14 85.5 394 24.6
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 1.4e-10 72.4 226 25.7
unitig_26.g10043 Utricularia gibba HOM05D004843 ORTHO05D005833 9.0e-10 69.7 81 48.1
BraA09t38198Z Brassica rapa HOM05D004843 ORTHO05D005833 6.4e-08 63.5 76 47.4
A09p55300 Brassica napus HOM05D004843 ORTHO05D005833 7.1e-07 60.1 75 45.3
MBI02_g30879_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 9.3e-07 59.7 76 47.4


User provided reference genes

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