Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03268 Eucalyptus grandis HOM05D006067 ORTHO05D007327 7.3e-33 143.3 71 100.0
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 6.2e-16 87.0 61 65.6
CsaV3_4G033090 Cucumis sativus L. HOM05D006067 ORTHO05D007327 1.5e-14 82.4 59 64.4
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 2.6e-14 81.6 65 56.9
MELO3C025643.2 Cucumis melo HOM05D006067 ORTHO05D007327 3.4e-14 81.3 58 67.2
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 4.4e-14 80.9 67 58.2
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 5.8e-14 80.5 53 66.0
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 3.7e-13 77.8 58 60.3
Cc05_g11060 Coffea canephora HOM05D006067 ORTHO05D007327 4.9e-13 77.4 51 66.7
FvH4_3g18260 Fragaria vesca HOM05D006067 ORTHO05D007327 8.3e-13 76.6 64 51.6
FAN11G2230 Fragaria x ananassa HOM05D006067 ORTHO05D007327 8.3e-13 76.6 64 51.6
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 8.3e-13 76.6 66 53.0
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 1.1e-12 76.3 52 59.6
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 1.4e-12 75.9 65 52.3
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 1.4e-12 75.9 65 52.3
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 1.9e-12 75.5 56 53.6
Atru.chr2.2107 Acer truncatum HOM05D006067 ORTHO05D007327 2.4e-12 75.1 64 50.0
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 3.2e-12 74.7 57 59.6
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 3.2e-12 74.7 66 51.5
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 4.1e-12 74.3 55 56.4
AUR62019577 Chenopodium quinoa HOM05D006067 ORTHO05D007327 4.1e-12 74.3 58 58.6
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 4.1e-12 74.3 49 65.3
Potri.011G109600 Populus trichocarpa HOM05D006067 ORTHO05D007327 4.1e-12 74.3 64 51.6
CANSAT35G0531 Cannabis sativa HOM05D006067 ORTHO05D007327 7.1e-12 73.6 55 52.7
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 7.1e-12 73.6 57 54.4
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 7.1e-12 73.6 60 55.0
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 9.2e-12 73.2 52 57.7
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 9.2e-12 73.2 69 46.4
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 1.2e-11 72.8 57 54.4
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 1.2e-11 72.8 53 56.6
RcHm_v2.0_Chr1g0314351 Rosa chinensis HOM05D006067 ORTHO05D007327 1.2e-11 72.8 51 58.8
RcHm_v2.0_Chr1g0357411 Rosa chinensis HOM05D006067 ORTHO05D007327 1.2e-11 72.8 51 58.8
RcHm_v2.0_Chr5g0030881 Rosa chinensis HOM05D006067 ORTHO05D007327 1.2e-11 72.8 51 58.8
AUR62007119 Chenopodium quinoa HOM05D006067 ORTHO05D007327 1.6e-11 72.4 59 54.2
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 1.6e-11 72.4 57 56.1
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 2.1e-11 72.0 52 57.7
Sabra11G0096900 Salix brachista HOM05D006067 ORTHO05D007327 2.1e-11 72.0 57 56.1
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 2.7e-11 71.6 46 69.6
TWI38G1841 Tripterygium wilfordii HOM05D006067 ORTHO05D007327 2.7e-11 71.6 65 49.2
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 3.5e-11 71.2 59 52.5
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 3.5e-11 71.2 59 52.5
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 3.5e-11 71.2 63 50.8
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 1.0e-10 69.7 51 62.7
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 1.0e-10 69.7 56 53.6
MSTRG.6678 Avicennia marina HOM05D006067 ORTHO05D007327 1.3e-10 69.3 50 56.0
Sabra16G0255800 Salix brachista HOM05D006067 ORTHO05D007327 1.3e-10 69.3 66 45.5
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 1.7e-10 68.9 55 52.7
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 1.7e-10 68.9 52 53.8
MBI07_g09563_MAGBIO Magnolia biondii HOM05D006067 ORTHO05D007327 2.3e-10 68.6 67 49.3
Prupe.4G164500 Prunus persica HOM05D006067 ORTHO05D007327 2.3e-10 68.6 48 64.6
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 3.0e-10 68.2 45 62.2
GSVIVG01014195001 Vitis vinifera HOM05D006067 ORTHO05D007327 3.0e-10 68.2 50 58.0
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 3.9e-10 67.8 53 54.7
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 5.1e-10 67.4 51 54.9
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 5.1e-10 67.4 47 57.4
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 6.6e-10 67.0 53 52.8
SalBow1G5118 Salvia bowleyana HOM05D006067 ORTHO05D007327 6.6e-10 67.0 50 58.0
SalBow8G2822 Salvia bowleyana HOM05D006067 ORTHO05D007327 6.6e-10 67.0 50 58.0
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 6.6e-10 67.0 51 52.9
Sopen07g030660 Solanum pennellii HOM05D006067 ORTHO05D007327 8.6e-10 66.6 47 59.6
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 1.1e-09 66.2 47 59.6
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 1.5e-09 65.9 45 57.8
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 1.9e-09 65.5 47 59.6
ECA240G2089 Erigeron canadensis HOM05D006067 ORTHO05D007327 2.5e-09 65.1 44 59.1
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 2.5e-09 65.1 46 56.5
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 4.3e-09 64.3 53 49.1
QL12p009545 Quercus lobata HOM05D006067 ORTHO05D007327 4.3e-09 64.3 60 50.0
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 5.6e-09 63.9 49 51.0
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 5.6e-09 63.9 49 51.0
Ca_03979_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 7.3e-09 63.5 49 53.1
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 7.3e-09 63.5 49 51.0
Medtr0022s0280 Medicago truncatula HOM05D006067 ORTHO05D007327 7.3e-09 63.5 65 49.2
Sc16g0007610 Simmondsia chinensis HOM05D006067 ORTHO05D007327 7.3e-09 63.5 44 56.8
Peaxi162Scf00692g00416 Petunia axillaris HOM05D006067 ORTHO05D007327 9.5e-09 63.2 48 52.1
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 9.5e-09 63.2 50 52.0
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 9.5e-09 63.2 52 50.0
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 1.2e-08 62.8 49 46.9
CSS0028289 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 1.6e-08 62.4 63 47.6
Nitab4.5_0000383g0160 Nicotiana tabacum HOM05D006067 ORTHO05D007327 1.6e-08 62.4 47 55.3
SHI37128 Sapria himalayana HOM05D006067 ORTHO05D007327 1.6e-08 62.4 66 50.0
Manes.15G095100 Manihot esculenta HOM05D006067 ORTHO05D007327 2.1e-08 62.0 66 45.5
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 2.1e-08 62.0 49 53.1
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 2.1e-08 62.0 49 49.0
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 2.8e-08 61.6 49 51.0
Eucgr.F03271 Eucalyptus grandis HOM05D006067 ORTHO05D007327 3.6e-08 61.2 61 45.9
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 3.6e-08 61.2 65 47.7
Migut.M00726 Erythranthe guttata HOM05D006067 ORTHO05D007327 4.7e-08 60.8 50 52.0
Sopen10g003170 Solanum pennellii HOM05D006067 ORTHO05D007327 4.7e-08 60.8 65 44.6
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 6.2e-08 60.5 65 44.6
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 8.1e-08 60.1 51 51.0
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 8.1e-08 60.1 49 49.0
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 1.4e-07 59.3 60 38.3
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea HOM05D006067 ORTHO05D007327 1.8e-07 58.9 45 46.7
ATR0012G052 Amborella trichopoda HOM05D006067 ORTHO05D007327 2.4e-07 58.5 61 47.5
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea HOM05D006067 ORTHO05D007327 2.4e-07 58.5 45 46.7
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 4.0e-07 57.8 51 49.0
Oeu031029.1 Olea europaea HOM05D006067 ORTHO05D007327 4.0e-07 57.8 48 50.0
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 5.2e-07 57.4 49 42.9
RcHm_v2.0_Chr7g0196621 Rosa chinensis HOM05D006067 ORTHO05D007327 6.8e-07 57.0 38 60.5
THA.LOC104812320 Tarenaya hassleriana HOM05D006067 ORTHO05D007327 2.6e-06 55.1 54 48.1


User provided reference genes

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