Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03267 Eucalyptus grandis HOM05D006067 ORTHO05D007327 2.5e-206 721.8 359 100.0
Eucgr.F03271 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.1e-63 248.1 161 74.5
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 6.7e-34 149.1 269 44.2
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 4.3e-33 146.4 288 39.6
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 2.2e-32 144.1 135 52.6
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 1.1e-31 141.7 268 38.1
Sabra11G0096900 Salix brachista HOM05D006067 ORTHO05D007327 1.7e-29 134.4 289 34.6
Sabra16G0255800 Salix brachista HOM05D006067 ORTHO05D007327 2.2e-29 134.0 291 35.4
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 3.8e-29 133.3 281 37.7
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 1.1e-28 131.7 341 30.8
Potri.011G109600 Populus trichocarpa HOM05D006067 ORTHO05D007327 1.1e-28 131.7 293 35.5
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 1.4e-28 131.3 205 40.5
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 2.5e-28 130.6 292 35.3
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 7.9e-27 125.6 287 34.8
RcHm_v2.0_Chr5g0030881 Rosa chinensis HOM05D006067 ORTHO05D007327 3.0e-26 123.6 302 35.8
GSVIVG01014195001 Vitis vinifera HOM05D006067 ORTHO05D007327 3.9e-26 123.2 284 37.3
CsaV3_4G033090 Cucumis sativus L. HOM05D006067 ORTHO05D007327 8.8e-26 122.1 285 34.4
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 1.5e-25 121.3 195 37.4
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 2.0e-25 120.9 254 35.8
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 2.5e-25 120.6 272 36.0
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 4.3e-25 119.8 313 33.5
Manes.15G095100 Manihot esculenta HOM05D006067 ORTHO05D007327 4.3e-25 119.8 296 33.4
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 9.7e-25 118.6 260 39.2
MELO3C025643.2 Cucumis melo HOM05D006067 ORTHO05D007327 1.3e-24 118.2 280 33.2
TWI38G1841 Tripterygium wilfordii HOM05D006067 ORTHO05D007327 2.2e-24 117.5 296 31.8
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 2.8e-24 117.1 325 29.8
CSS0028289 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 6.3e-24 115.9 261 34.9
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 1.1e-23 115.2 200 38.5
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 1.8e-23 114.4 286 32.9
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 1.8e-23 114.4 286 32.9
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 2.4e-23 114.0 331 33.2
Prupe.4G164500 Prunus persica HOM05D006067 ORTHO05D007327 5.3e-23 112.8 300 32.3
SalBow8G2822 Salvia bowleyana HOM05D006067 ORTHO05D007327 5.3e-23 112.8 262 35.5
Migut.M00726 Erythranthe guttata HOM05D006067 ORTHO05D007327 6.9e-23 112.5 269 36.8
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 1.5e-22 111.3 285 32.6
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 3.4e-22 110.2 169 37.3
Cc05_g11060 Coffea canephora HOM05D006067 ORTHO05D007327 4.5e-22 109.8 293 35.2
MBI07_g09563_MAGBIO Magnolia biondii HOM05D006067 ORTHO05D007327 5.9e-22 109.4 297 33.3
MSTRG.6678 Avicennia marina HOM05D006067 ORTHO05D007327 7.7e-22 109.0 298 33.9
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 7.7e-22 109.0 285 34.0
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 7.7e-22 109.0 371 30.7
RcHm_v2.0_Chr7g0196621 Rosa chinensis HOM05D006067 ORTHO05D007327 7.7e-22 109.0 276 33.0
CANSAT35G0531 Cannabis sativa HOM05D006067 ORTHO05D007327 1.7e-21 107.8 306 29.4
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 1.7e-21 107.8 391 29.9
Oeu031029.1 Olea europaea HOM05D006067 ORTHO05D007327 1.7e-21 107.8 271 34.3
Hma1.2p1_0290F.1_g114870 Hydrangea macrophylla HOM05D006067 ORTHO05D007327 2.9e-21 107.1 247 34.4
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 3.8e-21 106.7 280 33.9
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 6.5e-21 105.9 267 34.5
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 8.5e-21 105.5 301 29.2
Atru.chr2.2107 Acer truncatum HOM05D006067 ORTHO05D007327 1.1e-20 105.1 291 32.0
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 1.1e-20 105.1 305 30.5
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 2.5e-20 104.0 167 36.5
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 3.2e-20 103.6 262 35.5
QL12p009545 Quercus lobata HOM05D006067 ORTHO05D007327 4.2e-20 103.2 264 33.7
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 1.2e-19 101.7 237 32.5
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 2.1e-19 100.9 273 34.1
FAN11G2230 Fragaria x ananassa HOM05D006067 ORTHO05D007327 2.7e-19 100.5 298 31.9
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 3.6e-19 100.1 90 52.2
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 3.6e-19 100.1 290 32.4
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 4.7e-19 99.8 259 33.6
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 4.7e-19 99.8 150 36.7
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 6.1e-19 99.4 272 33.8
FvH4_3g18260 Fragaria vesca HOM05D006067 ORTHO05D007327 6.1e-19 99.4 290 32.1
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 7.9e-19 99.0 142 41.5
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 1.0e-18 98.6 311 28.6
RcHm_v2.0_Chr1g0314351 Rosa chinensis HOM05D006067 ORTHO05D007327 1.0e-18 98.6 273 31.5
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 1.0e-18 98.6 258 33.7
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 1.4e-18 98.2 98 49.0
Aa31LG4G2200 Aethionema arabicum HOM05D006067 ORTHO05D007327 2.0e-17 94.4 280 28.9
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 2.0e-17 94.4 297 31.3
Ca_03979_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 2.6e-17 94.0 90 52.2
Peaxi162Scf00692g00416 Petunia axillaris HOM05D006067 ORTHO05D007327 3.3e-17 93.6 268 33.6
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea HOM05D006067 ORTHO05D007327 4.4e-17 93.2 83 51.8
Carub.0002s2563 Capsella rubella HOM05D006067 ORTHO05D007327 4.4e-17 93.2 267 28.1
Sp5g33840 Schrenkiella parvula HOM05D006067 ORTHO05D007327 4.4e-17 93.2 280 29.6
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea HOM05D006067 ORTHO05D007327 5.7e-17 92.8 83 51.8
BolC2t09603H Brassica oleracea HOM05D006067 ORTHO05D007327 1.7e-16 91.3 258 29.5
C02p35900 Brassica napus HOM05D006067 ORTHO05D007327 2.2e-16 90.9 258 29.5
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 3.7e-16 90.1 97 46.4
BcaC03g15839 Brassica carinata HOM05D006067 ORTHO05D007327 4.8e-16 89.7 258 29.5
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 6.3e-16 89.4 196 31.1
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 8.2e-16 89.0 257 31.5
CARHR072360 Cardamine hirsuta HOM05D006067 ORTHO05D007327 1.1e-15 88.6 266 28.9
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 1.1e-15 88.6 343 28.0
AT1G78810 Arabidopsis thaliana HOM05D006067 ORTHO05D007327 1.4e-15 88.2 277 29.2
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 2.4e-15 87.4 274 30.3
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 2.4e-15 87.4 371 27.8
A02p22360 Brassica napus HOM05D006067 ORTHO05D007327 4.1e-15 86.7 258 29.1
BraA02t07240Z Brassica rapa HOM05D006067 ORTHO05D007327 4.1e-15 86.7 258 29.1
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 5.3e-15 86.3 284 29.2
Sopen07g030660 Solanum pennellii HOM05D006067 ORTHO05D007327 1.2e-14 85.1 190 30.5
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 1.5e-14 84.7 96 42.7
AL2G39210 Arabidopsis lyrata HOM05D006067 ORTHO05D007327 2.0e-14 84.3 273 30.4
Thhalv10018481m.g Eutrema salsugineum HOM05D006067 ORTHO05D007327 4.5e-14 83.2 323 26.6
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 5.9e-14 82.8 200 34.0
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 5.9e-14 82.8 198 35.4
RcHm_v2.0_Chr1g0357411 Rosa chinensis HOM05D006067 ORTHO05D007327 5.9e-14 82.8 106 41.5
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 7.7e-14 82.4 273 29.7
Sc16g0007610 Simmondsia chinensis HOM05D006067 ORTHO05D007327 2.2e-13 80.9 289 30.8
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 2.9e-13 80.5 208 34.6
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 3.8e-13 80.1 208 29.3
ATR0012G052 Amborella trichopoda HOM05D006067 ORTHO05D007327 2.5e-12 77.4 303 25.4
THA.LOC104812320 Tarenaya hassleriana HOM05D006067 ORTHO05D007327 2.5e-12 77.4 279 29.0
BcaB05g25155 Brassica carinata HOM05D006067 ORTHO05D007327 4.2e-12 76.6 332 26.2
Sopen10g003170 Solanum pennellii HOM05D006067 ORTHO05D007327 4.2e-12 76.6 257 35.8
Medtr0022s0280 Medicago truncatula HOM05D006067 ORTHO05D007327 5.5e-12 76.3 312 29.2
Nitab4.5_0003565g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 8.8e-10 68.9 254 28.0
HPP92_012804 Vanilla planifolia HOM05D006067 ORTHO05D007327 1.1e-09 68.6 280 26.4
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 1.5e-09 68.2 133 29.3
Lj1P829T26 Lonicera japonica HOM05D006067 ORTHO05D007327 7.4e-09 65.9 128 38.3
Os06g0153600 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 4.8e-08 63.2 94 37.2
ECA240G2089 Erigeron canadensis HOM05D006067 ORTHO05D007327 6.3e-08 62.8 83 39.8
Mapoly0061s0049 Marchantia polymorpha HOM05D006067 ORTHO05D007327 6.3e-08 62.8 134 30.6
Os01g0759000 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 1.4e-07 61.6 97 30.9
AUR62007119 Chenopodium quinoa HOM05D006067 ORTHO05D007327 2.4e-07 60.8 80 37.5
SalBow1G5118 Salvia bowleyana HOM05D006067 ORTHO05D007327 3.1e-07 60.5 63 50.8
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 7.0e-07 59.3 271 29.5
FAN16G1756 Fragaria x ananassa HOM05D006067 ORTHO05D007327 2.6e-06 57.4 219 30.1


User provided reference genes

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