Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 2.4e-193 678.7 356 100.0
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 4.8e-85 318.9 341 51.6
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 1.2e-75 287.7 338 48.2
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 7.7e-75 285.0 338 49.4
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 3.8e-74 282.7 326 50.0
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 8.6e-74 281.6 326 49.7
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 1.9e-73 280.4 338 50.0
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 3.3e-73 279.6 338 48.5
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 6.1e-72 275.4 338 49.4
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 1.8e-71 273.9 341 46.9
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 1.8e-71 273.9 330 47.6
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 8.9e-71 271.6 343 46.4
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 8.9e-71 271.6 343 46.4
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 2.6e-70 270.0 300 48.7
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 4.4e-70 269.2 329 47.7
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 1.3e-69 267.7 334 47.0
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 1.3e-69 267.7 338 48.2
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 1.3e-69 267.7 330 46.7
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 1.7e-69 267.3 329 47.4
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 2.9e-69 266.5 330 46.4
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 3.7e-69 266.2 338 46.2
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 1.1e-68 264.6 329 45.3
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 2.4e-68 263.5 333 46.5
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 7.0e-68 261.9 338 47.0
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 2.0e-67 260.4 338 45.0
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 1.7e-66 257.3 329 45.3
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 2.3e-66 256.9 250 56.0
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 8.6e-66 255.0 336 44.3
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 1.5e-65 254.2 341 45.5
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 1.9e-65 253.8 341 44.0
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 4.3e-65 252.7 338 45.9
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 5.6e-65 252.3 330 44.8
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 4.7e-64 249.2 301 45.8
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 4.7e-64 249.2 250 52.8
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 6.2e-64 248.8 329 45.9
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 6.2e-64 248.8 342 45.3
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 8.0e-64 248.4 337 43.6
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.8e-63 247.3 247 54.7
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.3e-63 246.9 299 47.5
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 1.2e-62 244.6 329 44.7
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 2.6e-62 243.4 337 41.5
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 3.4e-62 243.0 247 53.8
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 4.4e-62 242.7 341 43.1
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 1.7e-61 240.7 341 44.9
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 2.2e-61 240.4 342 43.0
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 3.7e-61 239.6 340 42.9
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 3.7e-61 239.6 331 43.5
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 4.9e-61 239.2 340 42.9
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 1.1e-60 238.0 340 42.9
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 1.9e-60 237.3 338 42.6
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 1.9e-60 237.3 339 41.9
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 2.4e-60 236.9 340 42.6
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 3.2e-60 236.5 340 42.9
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 4.1e-60 236.1 324 42.6
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 7.0e-60 235.3 337 41.5
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 6.0e-59 232.3 338 42.6
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 1.0e-58 231.5 262 51.1
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 5.0e-58 229.2 294 45.6
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 6.6e-58 228.8 337 41.5
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 8.6e-58 228.4 256 48.8
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.9e-57 227.3 330 43.0
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 1.9e-57 227.3 299 43.8
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.5e-57 226.9 330 43.0
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 3.3e-57 226.5 311 43.7
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 3.3e-57 226.5 339 43.4
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 3.3e-57 226.5 330 42.7
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.3e-57 226.1 331 43.8
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 4.3e-57 226.1 293 44.7
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 7.3e-57 225.3 294 44.9
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 1.6e-56 224.2 294 44.6
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.1e-56 223.8 330 42.7
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 2.1e-56 223.8 339 41.0
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 2.8e-56 223.4 338 42.3
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 4.7e-56 222.6 338 41.7
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 2.3e-55 220.3 338 40.2
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 2.3e-55 220.3 331 43.5
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 8.9e-55 218.4 253 47.8
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 8.9e-55 218.4 300 42.0
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 2.0e-54 217.2 341 39.9
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 3.4e-54 216.5 348 41.4
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 1.7e-53 214.2 336 40.5
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 1.7e-53 214.2 329 41.0
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 2.2e-53 213.8 338 40.8
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 6.4e-53 212.2 338 40.5
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 1.1e-52 211.5 225 54.7
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 1.9e-52 210.7 341 39.9
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 5.4e-52 209.1 333 40.2
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 9.2e-52 208.4 338 40.8
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 1.6e-51 207.6 341 39.6
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 2.1e-51 207.2 412 36.2
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 2.1e-51 207.2 304 43.1
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 4.6e-51 206.1 308 41.2
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 1.0e-50 204.9 342 39.8
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 2.3e-50 203.8 337 39.8
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 8.1e-48 195.3 183 57.4
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 8.9e-47 191.8 244 47.1
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 5.8e-46 189.1 277 41.9
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 2.2e-45 187.2 250 42.8
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 1.1e-44 184.9 244 45.1
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 4.1e-44 183.0 127 73.2
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.6e-43 181.0 237 46.4
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 2.1e-43 180.6 254 42.5
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 4.6e-43 179.5 194 52.6
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.3e-42 177.9 238 45.8
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 5.6e-41 172.6 286 39.5
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 7.3e-41 172.2 347 35.4
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 2.7e-35 153.7 249 39.4
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 2.3e-34 150.6 152 53.3
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 8.1e-32 142.1 103 68.0
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 5.8e-30 136.0 206 41.3
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 1.4e-28 131.3 113 61.9
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 1.6e-27 127.9 301 33.2
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 8.7e-26 122.1 151 47.0
Eucgr.F01010 Eucalyptus grandis HOM05D000783 ORTHO05D000705 1.6e-24 117.9 69 87.0
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 6.9e-23 112.5 175 41.1
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 4.6e-19 99.8 152 40.1
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 2.0e-14 84.3 103 45.6
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 4.5e-14 83.2 103 41.7
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 1.7e-13 81.3 106 45.3
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 2.9e-13 80.5 131 39.7
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.5e-12 77.4 58 69.0


User provided reference genes

Program Settings