Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 2.0e-89 332.4 166 100.0
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 3.7e-27 125.6 145 50.3
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 5.3e-26 121.7 166 51.2
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 2.0e-25 119.8 158 47.5
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 3.2e-23 112.5 180 42.2
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 3.5e-22 109.0 173 45.1
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 7.9e-22 107.8 171 43.3
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.3e-21 106.3 151 43.7
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 3.9e-21 105.5 172 41.3
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 5.1e-21 105.1 172 43.6
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 6.7e-21 104.8 173 45.1
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 8.7e-21 104.4 185 40.5
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 1.1e-20 104.0 163 42.3
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 4.3e-20 102.1 142 45.1
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 7.4e-20 101.3 188 40.4
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 9.7e-20 100.9 173 41.0
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.3e-19 100.5 178 39.9
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.6e-19 100.1 174 40.2
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 3.1e-18 95.9 161 43.5
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 3.1e-18 95.9 175 42.3
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 4.1e-18 95.5 156 41.0
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 4.1e-18 95.5 156 41.0
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 5.3e-18 95.1 156 41.0
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.5e-17 93.6 172 40.1
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 2.0e-17 93.2 173 42.2
MSTRG.15018 Avicennia marina HOM05D008142 ORTHO05D009674 2.6e-17 92.8 168 36.9
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 7.7e-17 91.3 156 43.6
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 7.7e-17 91.3 135 43.7
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 3.8e-16 89.0 134 43.3
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 3.2e-15 85.9 143 46.2
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 3.2e-15 85.9 155 40.0
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 4.2e-15 85.5 166 36.1
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 7.2e-15 84.7 139 39.6
Thecc.07G144300 Theobroma cacao HOM05D023069 ORTHO05D009674 7.2e-15 84.7 126 43.7
Gohir.A01G043100 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.2e-14 84.0 139 38.8
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 1.2e-14 84.0 170 38.8
Gohir.D01G033600 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.7e-14 82.8 142 36.6
Gohir.A01G043000 Gossypium hirsutum HOM05D008142 ORTHO05D009674 6.1e-14 81.6 142 37.3
Gohir.A01G042900 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.0e-13 80.9 135 40.7
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 2.3e-13 79.7 148 37.2
Gohir.D01G033400 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.3e-13 79.7 139 36.0
Gohir.D01G033500 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.3e-13 79.7 139 38.1
Gorai.002G040600 Gossypium raimondii HOM05D008142 ORTHO05D009674 2.3e-13 79.7 139 38.1
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 2.3e-13 79.7 139 38.1
Gorai.002G040900 Gossypium raimondii HOM05D008142 ORTHO05D009674 2.3e-13 79.7 134 37.3
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 2.3e-13 79.7 158 39.9
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 3.0e-13 79.3 161 41.0
Gohir.A01G042800 Gossypium hirsutum HOM05D008142 ORTHO05D009674 3.9e-13 79.0 139 36.0
TAR627G0610 Trochodendron aralioides HOM05D008142 ORTHO05D009674 3.9e-13 79.0 69 59.4
Gorai.002G040500 Gossypium raimondii HOM05D008142 ORTHO05D009674 5.1e-13 78.6 139 36.0
MBI10_g02220_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 6.7e-13 78.2 138 41.3
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 1.5e-12 77.0 163 36.2
COL.COLO4_17431 Corchorus olitorius HOM05D023069 ORTHO05D009674 2.5e-12 76.3 136 41.2
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 2.5e-12 76.3 176 31.2
COL.COLO4_17430 Corchorus olitorius HOM05D008142 ORTHO05D009674 5.7e-12 75.1 139 42.4
Gorai.002G040700 Gossypium raimondii HOM05D008142 ORTHO05D009674 5.7e-12 75.1 142 34.5
Gohir.A01G043200 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.3e-11 73.9 135 37.0
MBI07_g26359_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 1.3e-11 73.9 167 37.1
TAR626G0317 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.2e-11 73.2 146 39.7
Ciclev10022628m.g Citrus clementina HOM05D008142 ORTHO05D009674 2.8e-11 72.8 161 39.8
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 2.8e-11 72.8 186 34.4
Aqoxy1G01717 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 2.4e-10 69.7 171 35.7
Cpa.g.sc714.2 Carica papaya HOM05D008142 ORTHO05D009674 3.1e-10 69.3 110 42.7
Ca_03397_v3 Cicer arietinum L. HOM05D012055 ORTHO05D014183 5.3e-10 68.6 141 34.0
MSTRG.6725 Avicennia marina HOM05D008142 ORTHO05D009674 6.9e-10 68.2 145 33.8
Cc05_g10420 Coffea canephora HOM05D011950 ORTHO05D009674 6.9e-10 68.2 172 32.0
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 9.1e-10 67.8 153 33.3
Medtr2g071750 Medicago truncatula HOM05D012055 ORTHO05D014183 1.2e-09 67.4 169 34.9
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 1.5e-09 67.0 143 37.1
Psat0s1353g0040 Pisum sativum HOM05D012055 ORTHO05D014183 2.0e-09 66.6 154 33.8
TPR.G26651 Trifolium pratense HOM05D012055 ORTHO05D014183 2.0e-09 66.6 162 36.4
Phvul.005G061600 Phaseolus vulgaris HOM05D012055 ORTHO05D014183 2.6e-09 66.2 155 31.0
Gorai.002G040400 Gossypium raimondii HOM05D023069 ORTHO05D009674 3.4e-09 65.9 125 39.2
Psat1g009360 Pisum sativum HOM05D012055 ORTHO05D014183 3.4e-09 65.9 138 33.3
Gohir.D01G033300 Gossypium hirsutum HOM05D023069 ORTHO05D009674 5.9e-09 65.1 125 39.2
TPR.G26637 Trifolium pratense HOM05D012055 ORTHO05D014183 5.9e-09 65.1 146 33.6
RcHm_v2.0_Chr5g0028161 Rosa chinensis HOM05D015893 ORTHO05D019166 1.3e-08 63.9 178 31.5
Gohir.A01G042700 Gossypium hirsutum HOM05D023069 ORTHO05D009674 2.2e-08 63.2 125 38.4
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.2e-08 63.2 191 35.6
Oeu020030.1 Olea europaea HOM05D008142 ORTHO05D009674 2.2e-08 63.2 161 37.9
SalBow8G0857 Salvia bowleyana HOM05D008142 ORTHO05D009674 2.9e-08 62.8 162 35.2
MD11G1276300 Malus domestica HOM05D015893 ORTHO05D019166 3.8e-08 62.4 180 31.7
Medtr2g071760 Medicago truncatula HOM05D012055 ORTHO05D014183 3.8e-08 62.4 146 33.6
Medtr2g071790 Medicago truncatula HOM05D012055 ORTHO05D014183 3.8e-08 62.4 172 33.7
Sabra16G0249800 Salix brachista HOM05D008142 ORTHO05D009674 3.8e-08 62.4 147 36.1
Glyma.15G248000 Glycine max HOM05D012055 ORTHO05D014183 5.0e-08 62.0 149 30.9
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 8.5e-08 61.2 189 33.9
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 8.5e-08 61.2 187 32.6
VMungo1080G1331 Vigna mungo HOM05D012055 ORTHO05D014183 8.5e-08 61.2 154 32.5
Medtr2g071740 Medicago truncatula HOM05D012055 ORTHO05D014183 1.1e-07 60.8 171 33.3
Nitab4.5_0004038g0030 Nicotiana tabacum HOM05D026636 ORTHO05D022967 1.1e-07 60.8 163 33.7
Potri.001G379300 Populus trichocarpa HOM05D015893 ORTHO05D009674 1.1e-07 60.8 177 34.5
Glyma.13G260000 Glycine max HOM05D012055 ORTHO05D014183 1.9e-07 60.1 160 30.6
SGA_v2.0_scaffold73G24333 Striga asiatica HOM05D008142 ORTHO05D009674 1.9e-07 60.1 141 33.3
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.5e-07 59.7 138 35.5
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.1e-06 56.6 191 34.0
THA.LOC104822599 Tarenaya hassleriana HOM05D010899 ORTHO05D012947 2.1e-06 56.6 153 33.3
MD03G1255600 Malus domestica HOM05D015893 ORTHO05D019166 2.7e-06 56.2 182 31.3


User provided reference genes

Program Settings