Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 2.3e-50 202.6 160 100.0
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 9.0e-31 137.5 107 68.2
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.2e-27 127.1 105 63.8
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 1.0e-26 124.0 105 61.9
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 2.3e-26 122.9 102 63.7
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 5.1e-26 121.7 93 67.7
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 6.7e-26 121.3 102 61.8
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 8.7e-26 120.9 96 63.5
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 1.1e-25 120.6 101 63.4
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.5e-25 120.2 96 65.6
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 2.5e-25 119.4 105 60.0
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 2.5e-25 119.4 95 65.3
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 4.3e-25 118.6 101 60.4
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 4.3e-25 118.6 103 61.2
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 4.3e-25 118.6 101 61.4
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 4.3e-25 118.6 105 58.1
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 4.3e-25 118.6 102 57.8
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 5.6e-25 118.2 105 59.0
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 7.4e-25 117.9 96 62.5
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 9.6e-25 117.5 95 64.2
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 9.6e-25 117.5 102 62.7
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 1.3e-24 117.1 105 61.9
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.6e-24 116.7 100 58.0
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 1.6e-24 116.7 93 64.5
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 2.8e-24 115.9 103 59.2
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 4.8e-24 115.2 100 59.0
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 4.8e-24 115.2 97 58.8
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.8e-24 115.2 97 58.8
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.8e-24 115.2 97 58.8
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 4.8e-24 115.2 94 60.6
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 6.2e-24 114.8 94 62.8
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 6.2e-24 114.8 95 63.2
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 6.2e-24 114.8 100 60.0
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 8.1e-24 114.4 97 58.8
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 8.1e-24 114.4 94 63.8
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.1e-23 114.0 102 59.8
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.1e-23 114.0 98 57.1
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.4e-23 113.6 98 57.1
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.4e-23 113.6 97 57.7
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.4e-23 113.6 105 59.0
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.4e-23 113.6 105 59.0
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.8e-23 113.2 101 57.4
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.8e-23 113.2 101 55.4
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.8e-23 113.2 91 63.7
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.8e-23 113.2 94 61.7
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 2.4e-23 112.8 105 55.2
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 2.4e-23 112.8 101 60.4
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 3.1e-23 112.5 100 59.0
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 3.1e-23 112.5 96 60.4
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 4.0e-23 112.1 94 62.8
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 4.0e-23 112.1 92 63.0
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 5.3e-23 111.7 94 59.6
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 5.3e-23 111.7 98 57.1
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 5.3e-23 111.7 93 61.3
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 9.0e-23 110.9 101 57.4
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 9.0e-23 110.9 94 60.6
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 9.0e-23 110.9 97 56.7
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 9.0e-23 110.9 104 53.8
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.2e-22 110.5 93 63.4
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 1.5e-22 110.2 98 59.2
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 1.5e-22 110.2 93 59.1
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.5e-22 110.2 93 61.3
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 2.0e-22 109.8 94 59.6
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 2.0e-22 109.8 100 58.0
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 2.0e-22 109.8 94 58.5
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 2.6e-22 109.4 89 61.8
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 3.4e-22 109.0 99 58.6
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 3.4e-22 109.0 107 53.3
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 4.5e-22 108.6 107 53.3
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 4.5e-22 108.6 89 73.0
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 4.5e-22 108.6 107 53.3
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 4.5e-22 108.6 107 52.3
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 5.8e-22 108.2 92 60.9
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 7.6e-22 107.8 101 56.4
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 7.6e-22 107.8 92 59.8
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 7.6e-22 107.8 93 57.0
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 9.9e-22 107.5 99 57.6
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 9.9e-22 107.5 91 61.5
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.3e-21 107.1 98 56.1
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 2.2e-21 106.3 101 57.4
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 2.2e-21 106.3 100 55.0
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 3.8e-21 105.5 92 57.6
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 3.8e-21 105.5 97 53.6
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 6.4e-21 104.8 92 58.7
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 8.4e-21 104.4 108 51.9
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 2.5e-20 102.8 104 50.0
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 2.5e-20 102.8 93 55.9
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 2.5e-20 102.8 82 64.6
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 3.2e-20 102.4 91 59.3
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 2.1e-19 99.8 93 61.3
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 2.7e-19 99.4 103 50.5
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.5e-19 99.0 85 55.3
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 3.5e-19 99.0 81 65.4
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 7.9e-19 97.8 94 51.1
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 1.3e-18 97.1 79 60.8
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 3.0e-18 95.9 89 55.1
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 5.6e-17 91.7 123 43.1
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 9.6e-17 90.9 93 49.5
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.3e-16 90.5 97 51.5
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 4.8e-16 88.6 99 45.5
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.4e-15 87.0 132 38.6
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 6.9e-15 84.7 92 46.7
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 9.0e-15 84.3 112 49.1
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.6e-14 82.8 75 56.0
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 4.9e-13 78.6 94 43.6
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 6.5e-13 78.2 54 70.4
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 1.6e-11 73.6 85 43.5
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-11 73.2 94 37.2
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 2.1e-11 73.2 45 80.0
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.3e-10 70.5 87 43.7
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 2.3e-10 69.7 90 40.0
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 1.9e-09 66.6 90 40.0
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 4.5e-06 55.5 39 69.2
TPR.G3235 Trifolium pratense HOM05D007055 ORTHO05D008943 7.7e-06 54.7 39 69.2


User provided reference genes

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