Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 8.9e-160 567.0 311 100.0
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 1.0e-62 244.6 251 52.2
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.0e-59 234.6 295 49.2
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 5.8e-58 228.8 301 47.8
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 1.1e-56 224.6 266 48.1
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 1.1e-56 224.6 243 48.1
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 9.2e-56 221.5 254 49.6
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 1.2e-55 221.1 242 47.1
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 1.6e-55 220.7 299 45.5
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 7.8e-55 218.4 285 46.3
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 1.0e-54 218.0 295 45.4
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.7e-54 217.2 258 47.3
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 5.0e-54 215.7 288 48.3
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 6.6e-54 215.3 271 46.9
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 8.6e-54 214.9 263 48.3
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 2.5e-53 213.4 257 46.3
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 3.3e-53 213.0 320 44.1
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 4.3e-53 212.6 275 47.3
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 5.6e-53 212.2 257 47.1
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 2.1e-52 210.3 291 44.7
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 2.8e-52 209.9 283 45.2
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.8e-52 209.9 303 44.9
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 4.7e-52 209.1 255 44.3
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 6.2e-52 208.8 290 45.9
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 8.1e-52 208.4 326 47.5
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 3.1e-51 206.5 264 47.0
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 3.1e-51 206.5 276 44.2
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 6.8e-51 205.3 299 43.1
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 8.9e-51 204.9 292 42.5
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 1.2e-50 204.5 261 45.2
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 1.2e-50 204.5 248 47.2
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 1.2e-50 204.5 272 44.5
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.0e-50 203.8 259 43.6
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 3.4e-50 203.0 302 40.4
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 5.8e-50 202.2 272 41.9
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 1.7e-49 200.7 270 44.1
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 4.9e-49 199.1 280 45.7
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 6.4e-49 198.7 294 43.5
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 6.4e-49 198.7 299 43.8
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.4e-48 197.6 248 50.0
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.4e-48 197.6 248 50.0
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 3.2e-48 196.4 256 44.1
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 1.2e-47 194.5 285 41.4
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 1.2e-47 194.5 261 45.2
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 2.1e-47 193.7 329 42.2
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 4.6e-47 192.6 190 53.2
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.3e-46 191.0 275 40.7
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 3.0e-46 189.9 252 46.8
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 3.0e-46 189.9 244 44.3
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 5.1e-46 189.1 269 43.5
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 5.1e-46 189.1 325 39.4
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 1.5e-45 187.6 235 44.3
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 1.5e-45 187.6 292 43.5
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 5.6e-45 185.7 289 41.2
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 5.6e-45 185.7 291 46.0
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 9.5e-45 184.9 304 40.1
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 1.2e-44 184.5 312 38.1
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 1.6e-44 184.1 328 38.1
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 3.6e-44 183.0 293 38.9
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 1.4e-43 181.0 269 40.1
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 4.0e-43 179.5 292 40.8
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 5.2e-43 179.1 310 40.3
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 2.0e-42 177.2 222 47.7
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 2.6e-42 176.8 263 41.8
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 4.4e-42 176.0 269 39.8
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 7.6e-42 175.3 183 53.0
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 7.6e-42 175.3 197 46.7
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.9e-41 173.3 295 41.0
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 3.7e-41 172.9 193 44.6
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 6.4e-41 172.2 292 40.8
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 8.3e-41 171.8 288 43.4
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 8.3e-41 171.8 269 37.9
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 1.9e-40 170.6 338 35.8
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 5.4e-40 169.1 240 41.2
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 5.4e-40 169.1 294 38.4
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 9.2e-40 168.3 243 39.5
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 2.1e-39 167.2 281 41.6
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 2.1e-39 167.2 245 40.8
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 2.7e-39 166.8 296 41.9
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 2.7e-39 166.8 296 41.9
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 7.8e-39 165.2 267 41.6
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 3.0e-38 163.3 193 45.1
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 1.1e-37 161.4 296 36.8
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 1.3e-33 147.9 258 37.6
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 1.7e-33 147.5 258 37.2
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 6.4e-33 145.6 320 32.8
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 1.1e-27 128.3 163 47.2
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 6.9e-27 125.6 332 31.9
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 2.4e-24 117.1 157 40.8
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 2.1e-23 114.0 183 42.6
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 6.0e-23 112.5 157 43.9
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 5.6e-21 105.9 146 43.2
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 3.8e-17 93.2 248 33.5
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.5e-16 89.4 207 38.6
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 8.1e-12 75.5 111 38.7
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 2.7e-07 60.5 118 39.0
CDE05G2661 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 6.0e-07 59.3 116 37.9
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 6.0e-07 59.3 143 38.5


User provided reference genes

Program Settings