Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 3.2e-195 684.9 336 100.0
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 5.8e-157 557.8 328 83.5
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 7.4e-152 540.8 325 79.7
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 2.8e-151 538.9 326 80.7
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 1.4e-150 536.6 328 77.7
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 2.6e-149 532.3 328 77.1
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 8.5e-148 527.3 334 76.0
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 3.2e-147 525.4 329 77.5
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 4.2e-147 525.0 325 78.5
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 5.5e-147 524.6 331 77.6
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 6.1e-146 521.2 328 75.9
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 7.9e-146 520.8 334 74.9
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 7.9e-146 520.8 334 74.9
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 3.9e-145 518.5 348 74.4
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 5.1e-145 518.1 327 76.8
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 7.4e-144 514.2 314 78.7
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.8e-143 511.5 322 75.8
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 1.1e-142 510.4 315 78.7
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 5.3e-142 508.1 315 78.1
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 9.1e-142 507.3 316 77.2
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.5e-141 505.0 315 78.1
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 7.7e-141 504.2 322 76.4
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.6e-138 496.5 319 75.2
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 3.6e-138 495.4 314 76.8
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 2.3e-137 492.7 319 75.9
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 3.0e-137 492.3 312 76.6
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 3.0e-137 492.3 321 75.4
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 6.7e-137 491.1 322 73.9
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.5e-136 490.0 322 73.6
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.5e-136 490.0 331 71.9
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.3e-135 486.9 314 74.8
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.7e-135 486.5 311 75.6
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.7e-135 486.5 314 75.8
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 3.7e-135 485.3 310 75.2
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 8.2e-135 484.2 312 73.1
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 1.1e-134 483.8 310 74.8
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.8e-134 483.0 310 74.8
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.1e-134 482.3 318 72.6
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 3.1e-134 482.3 310 74.8
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 4.1e-134 481.9 319 73.0
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 5.3e-134 481.5 314 73.9
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 7.0e-134 481.1 310 73.9
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 7.0e-134 481.1 321 71.3
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 9.1e-134 480.7 319 71.8
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 3.5e-133 478.8 335 69.9
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 4.5e-133 478.4 311 74.9
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 4.5e-133 478.4 311 74.9
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 4.5e-133 478.4 313 72.2
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 5.9e-133 478.0 311 74.6
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 5.9e-133 478.0 319 73.4
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 5.9e-133 478.0 311 72.7
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 5.9e-133 478.0 311 74.0
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 7.7e-133 477.6 315 72.4
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.7e-132 476.5 313 72.2
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 3.8e-132 475.3 322 71.1
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 3.0e-129 465.7 313 71.6
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 6.7e-129 464.5 317 71.0
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 1.1e-128 463.8 337 68.8
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 4.4e-128 461.8 322 70.2
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 9.7e-128 460.7 338 68.0
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 1.7e-127 459.9 321 70.4
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 1.4e-126 456.8 334 68.0
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 3.1e-126 455.7 290 74.1
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 3.1e-126 455.7 318 69.2
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 5.3e-126 454.9 318 69.2
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 7.0e-126 454.5 310 69.4
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.5e-125 452.2 321 69.5
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 4.5e-125 451.8 325 67.1
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 5.9e-125 451.4 325 66.8
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 7.7e-125 451.1 272 81.6
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 2.2e-124 449.5 325 66.5
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 5.0e-124 448.4 327 66.7
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.6e-122 443.4 313 67.4
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 6.1e-122 441.4 310 68.4
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.4e-121 440.3 338 63.6
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 2.6e-120 436.0 292 71.9
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 3.3e-120 435.6 318 66.4
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 2.2e-119 433.0 279 76.0
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 4.8e-119 431.8 318 66.7
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 4.1e-118 428.7 314 64.6
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 1.5e-115 420.2 314 63.7
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.5e-115 420.2 313 65.2
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 2.5e-115 419.5 287 73.5
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 3.3e-107 392.5 326 61.7
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 1.6e-106 390.2 254 74.8
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 6.8e-105 384.8 250 74.4
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 4.4e-104 382.1 241 75.1
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 2.2e-103 379.8 317 59.9
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 4.9e-103 378.6 309 57.9
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 5.4e-102 375.2 313 60.7
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 1.3e-100 370.5 290 60.7
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 3.5e-93 345.9 309 53.7
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 1.9e-91 340.1 308 51.6
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.7e-90 335.5 308 51.0
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 2.0e-88 330.1 316 53.2
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.3e-87 327.4 312 49.4
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.3e-87 327.4 312 49.4
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-85 320.5 317 47.9
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.5e-83 313.9 308 49.7
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 2.1e-82 310.1 257 59.1
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.7e-82 308.9 307 48.9
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 4.0e-81 305.8 224 66.1
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.8e-81 305.1 317 46.7
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.2e-80 304.3 318 46.9
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 7.8e-77 291.6 319 49.2
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 2.9e-71 273.1 318 44.0
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 1.1e-70 271.2 310 48.4
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.9e-59 233.8 213 53.1
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.6e-45 187.6 276 39.1
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.4e-30 137.9 119 57.1
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 5.1e-28 129.4 329 29.8
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 1.2e-08 65.1 40 67.5


User provided reference genes

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