Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 8.6e-66 253.4 123 100.0
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 5.5e-36 154.5 85 81.2
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 9.3e-36 153.7 98 71.4
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.6e-35 152.9 88 78.4
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 2.7e-35 152.1 84 84.5
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 3.5e-35 151.8 100 72.0
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 6.0e-35 151.0 76 88.2
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 1.0e-34 150.2 91 76.9
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 3.0e-34 148.7 88 76.1
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 6.7e-34 147.5 80 82.5
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 6.7e-34 147.5 85 76.5
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 6.7e-34 147.5 123 60.2
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 8.7e-34 147.1 80 81.2
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 8.7e-34 147.1 122 61.5
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 8.7e-34 147.1 85 75.3
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 1.5e-33 146.4 76 82.9
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 1.5e-33 146.4 83 80.7
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 1.9e-33 146.0 80 81.2
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.9e-33 146.0 87 77.0
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 2.5e-33 145.6 80 80.0
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 2.5e-33 145.6 119 63.0
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 2.5e-33 145.6 88 72.7
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 3.3e-33 145.2 82 81.7
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 5.6e-33 144.4 123 61.8
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 5.6e-33 144.4 83 77.1
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 9.6e-33 143.7 80 80.0
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 9.6e-33 143.7 98 69.4
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 1.3e-32 143.3 94 71.3
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 1.3e-32 143.3 94 70.2
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 2.1e-32 142.5 94 70.2
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 2.1e-32 142.5 117 61.5
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 2.8e-32 142.1 80 78.8
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 2.8e-32 142.1 102 65.7
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 2.8e-32 142.1 117 61.5
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 3.7e-32 141.7 119 61.3
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 8.2e-32 140.6 77 80.5
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 8.2e-32 140.6 77 80.5
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 3.1e-31 138.7 83 74.7
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 3.1e-31 138.7 84 76.2
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 4.0e-31 138.3 82 78.0
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 4.0e-31 138.3 82 78.0
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 5.3e-31 137.9 106 66.0
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 4.5e-30 134.8 100 63.0
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 4.9e-29 131.3 86 70.9
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 8.4e-29 130.6 63 87.3
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 8.4e-29 130.6 63 87.3
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 1.4e-28 129.8 67 83.6
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 1.4e-28 129.8 67 83.6
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 1.9e-28 129.4 81 76.5
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.9e-28 129.4 109 62.4
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 1.0e-26 123.6 91 63.7
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 2.3e-26 122.5 86 65.1
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 6.7e-26 120.9 72 73.6
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 5.7e-25 117.9 112 58.0
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 1.3e-24 116.7 125 53.6
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 1.3e-24 116.7 118 51.7
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 1.6e-24 116.3 86 65.1
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 2.2e-24 115.9 85 63.5
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 2.8e-24 115.5 110 57.3
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 6.3e-24 114.4 101 56.4
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 1.5e-22 109.8 52 86.5
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 2.0e-22 109.4 99 57.6
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 2.0e-22 109.4 101 60.4
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 5.9e-22 107.8 93 59.1
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 1.4e-20 103.2 92 56.5
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 2.5e-20 102.4 115 50.4
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 2.5e-20 102.4 62 71.0
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 2.1e-19 99.4 103 53.4
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 7.9e-19 97.4 45 91.1
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 3.0e-18 95.5 46 91.3
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 3.3e-17 92.0 94 47.9
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 7.4e-17 90.9 81 59.3
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 7.4e-17 90.9 81 55.6
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 1.7e-16 89.7 92 51.1
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 2.8e-16 89.0 59 67.8
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 8.2e-16 87.4 113 47.8
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 4.1e-15 85.1 63 61.9
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 1.5e-14 83.2 81 51.9
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 5.9e-14 81.3 50 72.0
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 5.9e-14 81.3 90 52.2
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 2.6e-09 65.9 72 51.4
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 1.1e-07 60.5 30 80.0


User provided reference genes

Program Settings