Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 2.9e-177 625.2 327 100.0
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 7.6e-93 344.7 273 68.9
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 1.0e-89 334.3 305 61.0
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 1.1e-88 330.9 311 61.1
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 1.9e-88 330.1 293 62.5
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 5.6e-88 328.6 291 63.9
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 3.6e-87 325.9 280 65.0
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 4.8e-87 325.5 254 68.5
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 1.4e-86 323.9 299 61.2
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 4.0e-86 322.4 293 61.8
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 5.3e-86 322.0 255 68.2
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 1.2e-85 320.9 293 60.8
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 1.5e-85 320.5 298 61.7
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 2.0e-85 320.1 272 64.7
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 4.4e-85 318.9 309 59.5
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 4.4e-85 318.9 257 66.9
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 2.2e-84 316.6 254 67.7
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 4.9e-84 315.5 254 66.9
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 8.4e-84 314.7 265 65.3
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 8.4e-84 314.7 259 66.4
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 1.1e-83 314.3 266 64.3
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 2.1e-82 310.1 265 64.5
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 2.7e-82 309.7 293 59.0
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 3.5e-82 309.3 255 67.1
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 3.5e-82 309.3 263 64.3
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 3.9e-81 305.8 254 64.2
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 3.9e-81 305.8 254 64.2
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 5.1e-81 305.4 245 67.3
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 6.6e-81 305.1 265 62.6
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 6.6e-81 305.1 269 62.8
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 8.7e-81 304.7 254 63.8
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 1.1e-80 304.3 269 62.5
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 1.9e-80 303.5 269 62.8
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 4.3e-80 302.4 255 62.4
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 4.3e-80 302.4 280 61.1
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 7.3e-80 301.6 308 58.8
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 9.6e-80 301.2 233 70.0
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 1.3e-79 300.8 254 63.8
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 6.2e-79 298.5 243 65.0
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.8e-78 297.0 289 58.5
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 1.8e-78 297.0 243 64.6
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 5.3e-78 295.4 254 64.2
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 5.3e-78 295.4 254 63.0
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 1.7e-76 290.4 318 56.0
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 4.9e-76 288.9 310 58.1
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 4.2e-75 285.8 296 55.7
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 6.2e-71 271.9 215 66.5
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 5.3e-70 268.9 313 53.4
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 3.8e-68 262.7 253 57.3
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 1.9e-67 260.4 211 67.3
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 3.2e-67 259.6 290 52.1
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 9.3e-67 258.1 209 66.5
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 2.7e-66 256.5 209 64.1
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 1.9e-64 250.4 208 64.9
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 3.7e-63 246.1 271 53.1
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 3.7e-63 246.1 314 47.8
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 1.4e-62 244.2 204 61.8
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 1.0e-60 238.0 209 61.2
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 2.7e-58 229.9 226 57.1
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 2.0e-53 213.8 265 47.5
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 2.9e-52 209.9 246 47.2
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 6.7e-49 198.7 264 43.9
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 2.2e-44 183.7 167 59.3
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 8.5e-44 181.8 272 43.8
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 1.2e-34 151.4 114 67.5
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 2.6e-32 143.7 121 63.6
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 8.2e-31 138.7 122 63.1
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 4.1e-30 136.3 107 68.2
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 1.2e-26 124.8 90 70.0
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 6.1e-26 122.5 287 33.1
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 3.4e-24 116.7 101 65.3
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 2.2e-20 104.0 103 56.3
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 4.4e-16 89.7 95 55.8
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 6.6e-12 75.9 334 24.6
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 5.6e-11 72.8 291 28.5
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 6.1e-10 69.3 149 35.6
MBI03_g48045_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.7e-07 61.2 48 72.9


User provided reference genes

Program Settings