Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 1.0e-275 953.0 555 100.0
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 3.9e-142 509.2 562 58.5
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 1.9e-136 490.3 561 60.2
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 9.4e-136 488.0 564 59.8
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 6.1e-135 485.3 508 62.8
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 6.7e-126 455.3 565 55.8
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 1.5e-125 454.1 510 59.8
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 3.7e-124 449.5 495 58.6
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.4e-123 446.8 566 57.6
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 4.1e-123 446.0 513 60.0
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 7.7e-122 441.8 568 56.0
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 2.7e-119 433.3 521 58.0
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 2.7e-119 433.3 504 58.3
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 1.8e-118 430.6 496 57.7
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 2.8e-116 423.3 556 52.9
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 2.8e-116 423.3 552 55.4
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 4.8e-116 422.5 519 55.5
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 8.3e-116 421.8 517 57.1
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 8.3e-116 421.8 426 63.1
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 1.1e-115 421.4 513 55.8
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 3.1e-115 419.9 518 48.3
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 9.1e-115 418.3 498 56.2
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 3.5e-114 416.4 559 55.5
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 2.3e-113 413.7 505 55.6
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 3.3e-112 409.8 501 57.3
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 4.2e-112 409.5 553 53.7
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 5.5e-112 409.1 498 55.4
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 9.5e-112 408.3 494 56.3
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 2.1e-111 407.1 669 47.7
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 3.0e-110 403.3 471 57.5
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 2.6e-109 400.2 491 58.5
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 9.8e-109 398.3 516 53.7
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 1.3e-108 397.9 513 56.5
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.8e-107 394.0 566 52.5
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 5.4e-107 392.5 487 55.0
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 1.0e-105 388.3 500 54.4
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 5.0e-105 386.0 522 54.0
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 8.6e-105 385.2 468 58.8
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 3.3e-104 383.3 482 54.6
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 9.5e-104 381.7 483 56.5
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 3.6e-103 379.8 503 55.7
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 4.7e-103 379.4 512 52.7
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 8.0e-103 378.6 569 52.0
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 1.3e-100 371.3 494 52.6
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 4.9e-100 369.4 508 54.1
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 1.9e-99 367.5 569 41.5
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 7.0e-99 365.5 553 51.5
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 9.2e-99 365.2 490 55.9
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 1.2e-98 364.8 554 51.6
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 2.0e-98 364.0 537 50.8
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 1.3e-97 361.3 565 50.1
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 8.6e-97 358.6 506 52.8
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 8.6e-97 358.6 520 52.1
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 8.6e-97 358.6 566 50.0
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 1.5e-96 357.8 550 50.4
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 1.2e-95 354.8 509 52.5
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 1.6e-95 354.4 566 49.6
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 2.1e-95 354.0 391 62.9
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.8e-94 350.9 565 49.4
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 4.0e-94 349.7 498 53.8
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 1.5e-93 347.8 510 52.2
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.5e-93 347.8 554 50.4
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 7.5e-93 345.5 589 48.2
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.7e-92 344.4 501 51.5
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 6.4e-92 342.4 464 55.2
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 8.3e-92 342.0 495 53.1
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 7.0e-91 339.0 555 49.9
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 6.6e-89 332.4 376 63.3
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 1.9e-88 330.9 321 56.4
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 1.4e-86 324.7 309 71.8
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 4.4e-85 319.7 342 66.1
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 2.2e-84 317.4 529 48.4
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 6.4e-84 315.8 487 41.3
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 4.9e-76 289.7 290 52.8
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 8.4e-76 288.9 329 48.0
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 1.9e-72 277.7 503 43.1
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 4.3e-72 276.6 328 49.7
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 1.5e-61 241.5 268 51.1
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 1.7e-60 238.0 523 42.6
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 4.3e-56 223.4 266 50.4
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 1.1e-51 208.8 239 70.7
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.4e-51 208.4 422 35.5
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 4.3e-48 196.8 271 61.3
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.6e-47 194.9 330 53.0
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 4.8e-47 193.4 182 54.4
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.1e-38 165.6 125 63.2
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 1.4e-35 155.2 396 43.9
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 1.9e-35 154.8 276 55.8
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 5.5e-35 153.3 183 47.5
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.1e-34 151.4 131 55.0
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.1e-34 151.4 100 72.0
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.8e-28 130.6 442 34.4
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 6.3e-23 113.2 113 51.3
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.4e-22 112.1 143 46.9
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 3.1e-22 110.9 191 39.8
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 4.5e-21 107.1 505 23.6
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 5.9e-21 106.7 101 48.5
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 3.8e-20 104.0 98 53.1
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 1.9e-19 101.7 182 38.5
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 5.5e-19 100.1 175 40.6
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 4.4e-16 90.5 146 39.0
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 4.8e-15 87.0 215 34.0
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 1.1e-14 85.9 68 58.8
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 7.0e-14 83.2 84 54.8
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 2.2e-12 78.2 119 37.8
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 6.5e-12 76.6 68 51.5
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 6.5e-12 76.6 68 57.4
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 8.0e-10 69.7 45 75.6
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 2.3e-09 68.2 144 36.1
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 5.2e-09 67.0 75 48.0
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 8.8e-09 66.2 48 66.7
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 5.7e-08 63.5 284 26.4
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.3e-07 62.4 42 69.0
Cre01.g025500 Chlamydomonas reinhardtii HOM05D006674 ORTHO05D141511 5.3e-06 57.0 289 42.6


User provided reference genes

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