Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02865 Eucalyptus grandis HOM05D021175 ORTHO05D017781 1.8e-148 529.3 268 100.0
Dinv28192 Davidia involucrata HOM05D002346 ORTHO05D002452 7.8e-11 72.0 272 32.0
Sed0011871 Sechium edule HOM05D002346 ORTHO05D002452 8.6e-10 68.6 114 39.5
BcaC08g46928 Brassica carinata HOM05D001047 ORTHO05D000768 1.9e-09 67.4 145 35.2
Gorai.008G291000 Gossypium raimondii HOM05D002346 ORTHO05D002452 3.3e-09 66.6 165 31.5
Duzib138G0413 Durio zibethinus HOM05D041290 ORTHO05D017781 4.3e-09 66.2 158 31.6
Gohir.D12G270600 Gossypium hirsutum HOM05D002346 ORTHO05D002452 4.3e-09 66.2 162 31.5
Manes.11G016700 Manihot esculenta HOM05D001047 ORTHO05D000768 5.6e-09 65.9 131 35.9
Cfa019631 Carpinus fangiana HOM05D002346 ORTHO05D002452 9.5e-09 65.1 181 32.6
MELO3C002143.2 Cucumis melo HOM05D002346 ORTHO05D002452 9.5e-09 65.1 151 32.5
Gohir.A12G270200 Gossypium hirsutum HOM05D002346 ORTHO05D002452 9.5e-09 65.1 164 30.5
PGSC0003DMG400028800 Solanum tuberosum HOM05D002346 ORTHO05D002452 9.5e-09 65.1 135 35.6
BcaC03g15534 Brassica carinata HOM05D001047 ORTHO05D000768 2.1e-08 63.9 149 33.6
Hund05721 Selenicereus undatus HOM05D001047 ORTHO05D000768 3.6e-08 63.2 126 37.3
Haze_18893 Corylus avellana HOM05D002346 ORTHO05D002452 4.7e-08 62.8 181 33.7
Nitab4.5_0000201g0130 Nicotiana tabacum HOM05D021175 ORTHO05D017781 4.7e-08 62.8 95 44.2
SMO351G0489 Selaginella moellendorffii HOM05D001047 ORTHO05D000768 4.7e-08 62.8 94 41.5
A02p19630 Brassica napus HOM05D001047 ORTHO05D000768 8.0e-08 62.0 152 34.2
BolC2t09254H Brassica oleracea HOM05D001047 ORTHO05D000768 8.0e-08 62.0 150 33.3
BraA02t06999Z Brassica rapa HOM05D001047 ORTHO05D000768 8.0e-08 62.0 152 34.2
A07p40590 Brassica napus HOM05D001047 ORTHO05D000768 1.4e-07 61.2 159 32.7
CAN.G423.35 Capsicum annuum HOM05D002346 ORTHO05D002452 1.4e-07 61.2 183 30.1
CsaV3_1G007260 Cucumis sativus L. HOM05D002346 ORTHO05D002452 1.4e-07 61.2 151 31.8
Sopen06g026220 Solanum pennellii HOM05D002346 ORTHO05D002452 1.4e-07 61.2 163 28.2
C06p48960 Brassica napus HOM05D001047 ORTHO05D000768 1.8e-07 60.8 159 34.0
BolC6t39933H Brassica oleracea HOM05D001047 ORTHO05D000768 1.8e-07 60.8 159 34.0
unitig_52.g17282 Utricularia gibba HOM05D002346 ORTHO05D002452 1.8e-07 60.8 138 31.2
BcaB06g25850 Brassica carinata HOM05D002346 ORTHO05D002452 2.3e-07 60.5 166 34.9
Cpa.g.sc116.63 Carica papaya HOM05D041290 ORTHO05D017781 2.3e-07 60.5 101 41.6
BcaC05g28742 Brassica carinata HOM05D002346 ORTHO05D002452 4.0e-07 59.7 161 32.9
Prupe.5G235300 Prunus persica HOM05D002346 ORTHO05D002452 4.0e-07 59.7 344 25.6
Aa31LG4G5160 Aethionema arabicum HOM05D001047 ORTHO05D000768 5.2e-07 59.3 178 30.9
arahy.Tifrunner.gnm1.ann1.5M7JWE Arachis hypogaea HOM05D002346 ORTHO05D002452 5.2e-07 59.3 186 33.3
arahy.Tifrunner.gnm1.ann1.76C240 Arachis hypogaea HOM05D001047 ORTHO05D000768 5.2e-07 59.3 98 41.8
Peaxi162Scf00305g00018 Petunia axillaris HOM05D021175 ORTHO05D017781 5.2e-07 59.3 98 40.8
arahy.Tifrunner.gnm1.ann1.23LT4W Arachis hypogaea HOM05D002346 ORTHO05D002452 6.8e-07 58.9 186 31.7
C02p32160 Brassica napus HOM05D001047 ORTHO05D000768 6.8e-07 58.9 150 32.7
Solyc11g011030.2 Solanum lycopersicum HOM05D021175 ORTHO05D017781 6.8e-07 58.9 94 41.5
Sopen11g005800 Solanum pennellii HOM05D021175 ORTHO05D017781 6.8e-07 58.9 94 41.5
ATR0006G052 Amborella trichopoda HOM05D001047 ORTHO05D000768 8.9e-07 58.5 135 34.8
A05p31930 Brassica napus HOM05D002346 ORTHO05D002452 8.9e-07 58.5 162 34.0
C05p48430 Brassica napus HOM05D002346 ORTHO05D002452 8.9e-07 58.5 161 32.3
Nitab4.5_0000343g0360 Nicotiana tabacum HOM05D001047 ORTHO05D000768 8.9e-07 58.5 94 42.6
Solyc06g068930.2 Solanum lycopersicum HOM05D002346 ORTHO05D002452 8.9e-07 58.5 147 30.6
AL3G31030 Arabidopsis lyrata HOM05D002346 ORTHO05D002452 1.5e-06 57.8 251 27.9
unitig_27.g25311 Utricularia gibba HOM05D002346 ORTHO05D002452 1.5e-06 57.8 120 36.7
BolC5t33579H Brassica oleracea HOM05D002346 ORTHO05D002452 2.0e-06 57.4 167 32.9
Peaxi162Scf00207g00008 Petunia axillaris HOM05D002346 ORTHO05D002452 2.0e-06 57.4 218 26.1
PGSC0003DMG400015667 Solanum tuberosum HOM05D021175 ORTHO05D017781 2.0e-06 57.4 93 40.9
SGA_v2.0_scaffold7G04179 Striga asiatica HOM05D002346 ORTHO05D002452 2.0e-06 57.4 133 34.6
Thecc.03G059500 Theobroma cacao HOM05D002346 ORTHO05D002452 2.0e-06 57.4 183 29.5
ClCG04G010520 Citrullus lanatus HOM05D002346 ORTHO05D002452 2.6e-06 57.0 172 29.7
Lsat_1_v5_gn_8_45621 Lactuca sativa HOM05D002346 ORTHO05D002452 2.6e-06 57.0 165 30.9
Sabra12G0031300 Salix brachista HOM05D002346 ORTHO05D002452 2.6e-06 57.0 185 29.2
Zm00001eb068050 Zea mays HOM05D001047 ORTHO05D000768 2.6e-06 57.0 123 35.0
BcaNung06476 Brassica carinata HOM05D001047 ORTHO05D000768 3.4e-06 56.6 113 38.1
BolC9t59226H Brassica oleracea HOM05D006285 ORTHO05D007249 3.4e-06 56.6 101 39.6
Thecc.04G146300 Theobroma cacao HOM05D041290 ORTHO05D017781 3.4e-06 56.6 118 33.1
unitig_62.g23742 Utricularia gibba HOM05D002346 ORTHO05D002452 3.4e-06 56.6 150 30.0
BraA07t31603Z Brassica rapa HOM05D001047 ORTHO05D000768 4.4e-06 56.2 138 34.8
CAN.G2125.1 Capsicum annuum HOM05D001047 ORTHO05D000768 4.4e-06 56.2 82 43.9
FAN18G3599 Fragaria x ananassa HOM05D002346 ORTHO05D002452 4.4e-06 56.2 357 26.6
HanXRQChr08g0212431 Helianthus annuus HOM05D002346 ORTHO05D002452 4.4e-06 56.2 148 31.8
PSO386G0059 Papaver somniferum HOM05D001047 ORTHO05D000768 4.4e-06 56.2 104 36.5
BraA05t22024Z Brassica rapa HOM05D002346 ORTHO05D002452 5.8e-06 55.8 169 32.5
Dinv28069 Davidia involucrata HOM05D002346 ORTHO05D002452 5.8e-06 55.8 172 32.6
Aa31LG7G3900 Aethionema arabicum HOM05D001047 ORTHO05D000768 7.5e-06 55.5 144 32.6
Haze_16063 Corylus avellana HOM05D001047 ORTHO05D000768 7.5e-06 55.5 151 30.5
DCAR_011935 Daucus carota HOM05D001047 ORTHO05D000768 7.5e-06 55.5 79 43.0
Cpa.g.c31503 Carica papaya HOM05D002346 ORTHO05D002452 9.8e-06 55.1 187 28.3
Ca_25347_v3 Cicer arietinum L. HOM05D002346 ORTHO05D002452 9.8e-06 55.1 167 32.3
Ciclev10026527m.g Citrus clementina HOM05D001047 ORTHO05D000768 9.8e-06 55.1 89 40.4
Nitab4.5_0011970g0020 Nicotiana tabacum HOM05D002346 ORTHO05D002452 9.8e-06 55.1 182 28.6


User provided reference genes

Program Settings