Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 1.4e-68 262.7 125 100.0
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 1.6e-54 216.1 119 82.4
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 3.5e-54 214.9 119 82.4
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 2.9e-53 211.8 119 82.4
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 3.8e-53 211.5 120 80.0
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 1.1e-52 209.9 119 80.7
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 4.2e-52 208.0 119 80.7
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 5.5e-52 207.6 118 78.0
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 7.2e-52 207.2 119 80.7
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 9.4e-52 206.8 119 78.2
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 1.2e-51 206.5 119 79.8
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 1.2e-51 206.5 120 80.0
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 1.2e-51 206.5 116 79.3
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 1.2e-51 206.5 119 78.2
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 1.2e-51 206.5 119 76.5
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 1.6e-51 206.1 119 76.5
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.6e-51 206.1 120 79.2
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 2.1e-51 205.7 119 79.8
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 2.1e-51 205.7 120 79.2
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 2.7e-51 205.3 120 77.5
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 2.7e-51 205.3 120 74.2
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 3.6e-51 204.9 120 79.2
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 3.6e-51 204.9 120 79.2
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 4.7e-51 204.5 120 77.5
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 4.7e-51 204.5 119 77.3
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 4.7e-51 204.5 118 77.1
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 6.1e-51 204.1 120 75.0
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 6.1e-51 204.1 120 75.0
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 6.1e-51 204.1 119 79.8
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.8e-50 202.6 119 79.0
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 2.3e-50 202.2 117 78.6
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 3.0e-50 201.8 119 76.5
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 3.0e-50 201.8 119 74.8
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 5.2e-50 201.1 119 73.1
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 6.7e-50 200.7 119 75.6
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 6.7e-50 200.7 119 76.5
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 8.8e-50 200.3 119 72.3
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 8.8e-50 200.3 120 76.7
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.2e-49 199.9 115 78.3
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 1.5e-49 199.5 115 79.1
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 1.5e-49 199.5 119 75.6
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 2.6e-49 198.7 119 71.4
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 2.6e-49 198.7 119 76.5
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 2.6e-49 198.7 121 73.6
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 3.3e-49 198.4 119 75.6
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 4.4e-49 198.0 120 75.0
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 7.5e-49 197.2 138 69.6
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 7.5e-49 197.2 120 76.7
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 1.3e-48 196.4 120 74.2
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 2.8e-48 195.3 119 75.6
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.8e-48 195.3 138 68.8
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 2.8e-48 195.3 119 77.3
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 3.7e-48 194.9 120 73.3
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 3.7e-48 194.9 120 73.3
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 3.7e-48 194.9 120 73.3
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 3.7e-48 194.9 119 74.8
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 6.3e-48 194.1 107 79.4
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 8.2e-48 193.7 119 73.1
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 1.1e-47 193.4 120 75.0
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 1.4e-47 193.0 120 71.7
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.4e-47 193.0 130 69.2
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 3.1e-47 191.8 119 73.1
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 7.0e-47 190.7 119 71.4
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 7.0e-47 190.7 122 68.9
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 7.0e-47 190.7 121 73.6
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 7.0e-47 190.7 121 73.6
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 7.0e-47 190.7 119 73.9
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 1.2e-46 189.9 124 68.5
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 4.5e-46 188.0 120 70.0
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 7.7e-46 187.2 120 69.2
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.5e-44 183.0 101 79.2
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 3.2e-44 181.8 113 72.6
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 7.2e-44 180.6 119 68.1
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 2.7e-43 178.7 119 67.2
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 4.7e-43 177.9 119 68.1
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 4.7e-43 177.9 119 68.1
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 4.7e-43 177.9 119 68.1
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 4.7e-43 177.9 119 68.1
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 8.0e-43 177.2 119 67.2
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 8.0e-43 177.2 119 68.9
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 3.0e-42 175.3 118 68.6
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 6.8e-42 174.1 119 65.5
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 8.8e-42 173.7 119 67.2
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 8.8e-42 173.7 119 66.4
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 1.2e-41 173.3 119 67.2
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 1.2e-41 173.3 119 66.4
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 4.4e-41 171.4 119 67.2
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 9.8e-41 170.2 122 63.9
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 2.2e-40 169.1 119 65.5
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 8.3e-40 167.2 119 64.7
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.6e-38 162.9 119 66.4
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 1.7e-37 159.5 145 55.9
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 2.3e-37 159.1 119 62.2
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 6.5e-37 157.5 88 77.3
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.8e-34 149.4 105 63.8
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.5e-33 146.4 105 60.0
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 6.3e-32 141.0 119 55.5
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 4.7e-27 124.8 93 57.0
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.0e-26 123.6 66 81.8
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 5.2e-26 121.3 118 50.0
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 7.5e-25 117.5 72 66.7
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 3.2e-15 85.5 119 42.9
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 4.6e-14 81.6 52 65.4


User provided reference genes

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