Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02816 Eucalyptus grandis HOM05D002536 ORTHO05D008091 5.1e-182 641.0 325 100.0
Atru.chr1.1780 Acer truncatum HOM05D002536 ORTHO05D008091 6.1e-119 431.4 307 74.9
Atru.chr1.1783 Acer truncatum HOM05D002536 ORTHO05D008091 6.1e-119 431.4 307 74.9
Sabra04G0061700 Salix brachista HOM05D002536 ORTHO05D008091 1.5e-117 426.8 275 78.9
TWI53G1346 Tripterygium wilfordii HOM05D002536 ORTHO05D008091 1.4e-115 420.2 302 74.8
TAR622G0880 Trochodendron aralioides HOM05D002536 ORTHO05D008091 3.1e-115 419.1 277 76.5
Potri.004G091600 Populus trichocarpa HOM05D002536 ORTHO05D008091 4.1e-115 418.7 272 79.4
Prupe.3G152500 Prunus persica HOM05D002536 ORTHO05D008091 1.2e-114 417.2 326 70.9
Rhsim10G0078900 Rhododendron simsii HOM05D002536 ORTHO05D008091 1.6e-114 416.8 270 78.9
Psat2g023480 Pisum sativum HOM05D002536 ORTHO05D008091 3.5e-114 415.6 267 77.9
Sed0014940 Sechium edule HOM05D002536 ORTHO05D008091 2.2e-113 412.9 289 76.1
QL05p059839 Quercus lobata HOM05D002536 ORTHO05D008091 2.5e-112 409.5 282 75.9
arahy.Tifrunner.gnm1.ann1.SZ684F Arachis hypogaea HOM05D002536 ORTHO05D008091 3.2e-112 409.1 267 77.9
CANSAT78G0797 Cannabis sativa HOM05D002536 ORTHO05D008091 3.2e-112 409.1 267 80.5
Cfa007856 Carpinus fangiana HOM05D002536 ORTHO05D008091 3.2e-112 409.1 324 70.1
COL.COLO4_16592 Corchorus olitorius HOM05D002536 ORTHO05D008091 5.5e-112 408.3 284 74.3
Ah.10g037920 Amaranthus hybridus HOM05D002536 ORTHO05D008091 7.2e-112 407.9 267 79.0
Lalb_Chr03g0036071 Lupinus albus HOM05D002536 ORTHO05D008091 7.2e-112 407.9 267 77.9
EL10Ac2g04494 Beta vulgaris HOM05D002536 ORTHO05D008091 9.4e-112 407.5 268 78.4
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 1.6e-111 406.8 269 77.7
arahy.Tifrunner.gnm1.ann1.NZLK2N Arachis hypogaea HOM05D002536 ORTHO05D008091 2.1e-111 406.4 270 76.3
Ca_06135_v3 Cicer arietinum L. HOM05D002536 ORTHO05D008091 2.1e-111 406.4 267 76.8
QL05p059601 Quercus lobata HOM05D002536 ORTHO05D008091 4.7e-111 405.2 283 74.9
TPR.G11790 Trifolium pratense HOM05D002536 ORTHO05D008091 6.1e-111 404.8 313 69.0
AUR62023248 Chenopodium quinoa HOM05D002536 ORTHO05D008091 1.0e-110 404.1 267 78.7
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 2.3e-110 402.9 269 77.3
PGR004G1229 Punica granatum HOM05D002536 ORTHO05D008091 2.3e-110 402.9 323 68.7
MELO3C020303.2 Cucumis melo HOM05D002536 ORTHO05D008091 3.0e-110 402.5 268 77.2
LjContig00564g0008816 Lotus japonicus HOM05D002536 ORTHO05D008091 3.0e-110 402.5 313 68.7
Actinidia15922 Actinidia chinensis HOM05D002536 ORTHO05D008091 4.0e-110 402.1 270 77.0
Medtr5g086010 Medicago truncatula HOM05D002536 ORTHO05D008091 4.0e-110 402.1 267 76.0
Medtr5g087440 Medicago truncatula HOM05D002536 ORTHO05D008091 8.8e-110 401.0 315 67.9
Ciclev10012168m.g Citrus clementina HOM05D002536 ORTHO05D008091 3.4e-109 399.1 265 79.2
Lj2P435T31 Lonicera japonica HOM05D002536 ORTHO05D008091 3.4e-109 399.1 261 78.9
CsaV3_3G017670 Cucumis sativus L. HOM05D002536 ORTHO05D008091 4.4e-109 398.7 266 77.4
Aqoxy3G00142 Aquilegia oxysepala HOM05D002536 ORTHO05D008091 1.3e-108 397.1 269 75.5
ClCG05G010840 Citrullus lanatus HOM05D002536 ORTHO05D008091 2.8e-108 396.0 269 77.0
GSVIVG01030879001 Vitis vinifera HOM05D002536 ORTHO05D008091 3.7e-108 395.6 271 76.8
CiPaw.04G045700 Carya illinoinensis HOM05D002536 ORTHO05D008091 1.1e-107 394.0 321 68.8
FAN23G2237 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.4e-107 393.7 278 74.1
Cpa.g.sc116.19 Carica papaya HOM05D002536 ORTHO05D008091 1.8e-107 393.3 318 68.2
QL05p058873 Quercus lobata HOM05D002536 ORTHO05D008091 3.1e-107 392.5 271 75.6
Hund13690 Selenicereus undatus HOM05D002536 ORTHO05D008091 5.4e-107 391.7 270 75.9
DCAR_008922 Daucus carota HOM05D000103 ORTHO05D008091 1.6e-106 390.2 264 78.0
GSVIVG01030878001 Vitis vinifera HOM05D002536 ORTHO05D008091 1.6e-106 390.2 321 68.5
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 2.7e-106 389.4 265 76.2
Gohir.A04G142800 Gossypium hirsutum HOM05D002536 ORTHO05D008091 3.5e-106 389.0 306 69.9
Gohir.D04G186100 Gossypium hirsutum HOM05D002536 ORTHO05D008091 1.7e-105 386.7 308 69.5
Gorai.012G182500 Gossypium raimondii HOM05D002536 ORTHO05D008091 1.7e-105 386.7 308 69.5
Sc10g0000870 Simmondsia chinensis HOM05D002536 ORTHO05D008091 2.9e-105 386.0 268 74.6
VMungo1309G0890 Vigna mungo HOM05D002536 ORTHO05D008091 5.0e-105 385.2 297 69.0
MSTRG.23612 Avicennia marina HOM05D002536 ORTHO05D008091 6.6e-105 384.8 288 69.8
Manes.01G115200 Manihot esculenta HOM05D002536 ORTHO05D008091 8.6e-105 384.4 235 86.0
Sp6g26760 Schrenkiella parvula HOM05D002536 ORTHO05D008091 8.6e-105 384.4 314 67.2
Sopen02g035940 Solanum pennellii HOM05D002536 ORTHO05D008091 8.6e-105 384.4 268 75.4
Phvul.004G133300 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 1.5e-104 383.6 298 69.5
Dinv19004 Davidia involucrata HOM05D002536 ORTHO05D008091 1.9e-104 383.3 326 67.5
Cc07_g08230 Coffea canephora HOM05D002536 ORTHO05D008091 4.3e-104 382.1 275 72.0
Solyc02g091320.4 Solanum lycopersicum HOM05D002536 ORTHO05D008091 7.3e-104 381.3 315 66.7
Duzib248G1146 Durio zibethinus HOM05D002536 ORTHO05D008091 1.6e-103 380.2 307 69.1
ECA232G4028 Erigeron canadensis HOM05D002536 ORTHO05D008091 1.6e-103 380.2 316 67.1
HanXRQChr11g0325231 Helianthus annuus HOM05D002536 ORTHO05D008091 1.6e-103 380.2 275 72.7
RcHm_v2.0_Chr3g0492091 Rosa chinensis HOM05D002536 ORTHO05D008091 1.6e-103 380.2 320 65.9
Thhalv10014009m.g Eutrema salsugineum HOM05D002536 ORTHO05D008091 2.1e-103 379.8 269 72.5
Phvul.008G162400 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 3.6e-103 379.0 297 68.7
Nn3g18195 Nelumbo nucifera HOM05D002536 ORTHO05D008091 4.7e-103 378.6 273 72.2
Thecc.02G292900 Theobroma cacao HOM05D002536 ORTHO05D008091 4.7e-103 378.6 326 66.0
Hma1.2p1_0283F.1_g113560 Hydrangea macrophylla HOM05D002536 ORTHO05D008091 6.1e-103 378.3 269 74.7
Oeu047422.1 Olea europaea HOM05D002536 ORTHO05D008091 1.4e-102 377.1 324 67.0
SalBow3G4287 Salvia bowleyana HOM05D002536 ORTHO05D008091 3.0e-102 375.9 270 71.1
Migut.H00262 Erythranthe guttata HOM05D002536 ORTHO05D008091 5.2e-102 375.2 285 69.5
Nitab4.5_0002456g0160 Nicotiana tabacum HOM05D002536 ORTHO05D008091 5.2e-102 375.2 268 73.5
Peaxi162Scf00803g00531 Petunia axillaris HOM05D002536 ORTHO05D008091 5.2e-102 375.2 268 73.1
arahy.Tifrunner.gnm1.ann1.CBV847 Arachis hypogaea HOM05D002536 ORTHO05D008091 1.2e-101 374.0 252 74.6
Nitab4.5_0002248g0020 Nicotiana tabacum HOM05D002536 ORTHO05D008091 1.2e-101 374.0 268 73.5
arahy.Tifrunner.gnm1.ann1.YLI9AK Arachis hypogaea HOM05D002536 ORTHO05D008091 1.5e-101 373.6 240 77.5
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 2.6e-101 372.9 270 71.5
CAN.G625.80 Capsicum annuum HOM05D002536 ORTHO05D008091 5.7e-101 371.7 269 72.5
Lsat_1_v5_gn_4_154760 Lactuca sativa HOM05D002536 ORTHO05D008091 5.7e-101 371.7 318 64.8
FvH4_1g30050 Fragaria vesca HOM05D002536 ORTHO05D008091 7.5e-101 371.3 278 70.5
PGSC0003DMG400030642 Solanum tuberosum HOM05D002536 ORTHO05D008091 1.7e-100 370.2 268 73.5
A02p04220 Brassica napus HOM05D002536 ORTHO05D008091 3.2e-99 365.9 270 70.4
BraA02t05385Z Brassica rapa HOM05D002536 ORTHO05D008091 3.2e-99 365.9 270 70.4
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 9.2e-99 364.4 268 72.8
FAN19G1396 Fragaria x ananassa HOM05D002536 ORTHO05D008091 3.5e-98 362.5 265 71.3
FAN26G2179 Fragaria x ananassa HOM05D002536 ORTHO05D008091 3.5e-98 362.5 317 63.4
BolC2t06821H Brassica oleracea HOM05D002536 ORTHO05D008091 4.6e-98 362.1 267 69.7
C02p09100 Brassica napus HOM05D002536 ORTHO05D008091 2.3e-97 359.8 274 68.2
PSO478G1642 Papaver somniferum HOM05D002536 ORTHO05D008091 1.1e-96 357.5 273 69.6
PSO782G0049 Papaver somniferum HOM05D002536 ORTHO05D008091 1.9e-96 356.7 275 69.1
CARHR195750 Cardamine hirsuta HOM05D002536 ORTHO05D008091 2.1e-95 353.2 273 68.9
QL05p059463 Quercus lobata HOM05D002536 ORTHO05D008091 2.1e-95 353.2 313 64.2
AL6G28530 Arabidopsis lyrata HOM05D002536 ORTHO05D008091 6.2e-95 351.7 269 69.9
Carub.0006s1568 Capsella rubella HOM05D002536 ORTHO05D008091 3.1e-94 349.4 269 69.1
AT5G17460 Arabidopsis thaliana HOM05D002536 ORTHO05D008091 1.9e-91 340.1 235 75.3
Os01g0125700 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D008091 8.1e-87 324.7 262 66.0
AUR62023202 Chenopodium quinoa HOM05D002536 ORTHO05D008091 4.0e-86 322.4 226 73.5
CDE07G0699 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 7.5e-85 318.2 283 60.8
BcaC03g13522 Brassica carinata HOM05D002536 ORTHO05D008091 9.2e-83 311.2 234 67.5
ATR0041G006 Amborella trichopoda HOM05D002536 ORTHO05D008091 1.2e-82 310.8 265 62.3
SHI17045 Sapria himalayana HOM05D002536 ORTHO05D008091 1.1e-80 304.3 271 63.1
FAN28G0948 Fragaria x ananassa HOM05D002536 ORTHO05D008091 3.6e-79 299.3 220 69.1
SGA_v2.0_scaffold6G03262 Striga asiatica HOM05D002536 ORTHO05D008091 8.1e-79 298.1 249 61.8
Glyma.14G164000 Glycine max HOM05D002536 ORTHO05D008091 2.0e-77 293.5 297 58.2
SGA_v2.0_scaffold6G03263 Striga asiatica HOM05D002536 ORTHO05D008091 3.9e-73 279.3 247 59.9
Zm00001eb334950 Zea mays HOM05D002536 ORTHO05D008091 7.3e-72 275.0 170 81.2
SGA_v2.0_scaffold6G03266 Striga asiatica HOM05D002536 ORTHO05D008091 3.1e-70 269.6 240 60.8
MD09G1260800 Malus domestica HOM05D002536 ORTHO05D008091 2.9e-68 263.1 183 73.2
unitig_899.g15351 Utricularia gibba HOM05D002536 ORTHO05D008091 1.9e-67 260.4 219 61.6
MBI16_g46274_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D008091 5.1e-65 252.3 172 72.7
SEGI_34238 Sequoiadendron giganteum HOM05D002536 ORTHO05D008091 7.9e-58 228.4 264 47.3
SGA_v2.0_scaffold6G03268 Striga asiatica HOM05D002536 ORTHO05D008091 3.9e-57 226.1 233 54.1
Glyma.13G079200 Glycine max HOM05D002536 ORTHO05D008091 8.7e-57 224.9 184 63.0
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 2.5e-43 180.3 134 70.1
MD09G1260900 Malus domestica HOM05D002536 ORTHO05D008091 6.7e-41 172.2 179 53.6
FAN28G0812 Fragaria x ananassa HOM05D002536 ORTHO05D008091 5.3e-38 162.5 264 41.7
A10p21940 Brassica napus HOM05D002536 ORTHO05D008091 6.7e-25 119.0 81 74.1
HPP92_000766 Vanilla planifolia HOM05D002536 ORTHO05D008091 2.6e-24 117.1 122 52.5
BolC9t58807H Brassica oleracea HOM05D002536 ORTHO05D008091 1.4e-22 111.3 84 69.0
BcaC04g18790 Brassica carinata HOM05D002536 ORTHO05D008091 2.4e-22 110.5 122 54.9
C09p59690 Brassica napus HOM05D002536 ORTHO05D008091 3.4e-21 106.7 122 54.9
BraA10t44252Z Brassica rapa HOM05D002536 ORTHO05D008091 1.8e-09 67.8 66 56.1
A10p21930 Brassica napus HOM05D002536 ORTHO05D008091 6.7e-09 65.9 66 56.1


User provided reference genes

Program Settings