Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02801 Eucalyptus grandis HOM05D004281 ORTHO05D004839 3.9e-123 444.9 236 100.0
Eucgr.L01202 Eucalyptus grandis HOM05D004281 ORTHO05D004839 1.6e-121 439.5 236 98.3
THA.LOC104804375 Tarenaya hassleriana HOM05D004281 ORTHO05D004839 1.5e-79 300.1 188 79.8
Gohir.A11G012100 Gossypium hirsutum HOM05D004281 ORTHO05D004839 3.4e-79 298.9 188 81.4
arahy.Tifrunner.gnm1.ann1.MYV34H Arachis hypogaea HOM05D004281 ORTHO05D004839 1.3e-78 297.0 189 79.4
Manes.02G102600 Manihot esculenta HOM05D004281 ORTHO05D004839 1.3e-78 297.0 194 78.9
Gohir.D11G011300 Gossypium hirsutum HOM05D004281 ORTHO05D004839 2.2e-78 296.2 188 80.9
Gorai.007G012700 Gossypium raimondii HOM05D004281 ORTHO05D004839 2.2e-78 296.2 188 80.9
Gohir.A04G135700 Gossypium hirsutum HOM05D004281 ORTHO05D004839 2.9e-78 295.8 188 80.9
Gohir.D04G178800 Gossypium hirsutum HOM05D004281 ORTHO05D004839 2.9e-78 295.8 188 80.9
Gorai.012G171900 Gossypium raimondii HOM05D004281 ORTHO05D004839 2.9e-78 295.8 188 80.9
CANSAT78G2301 Cannabis sativa HOM05D004281 ORTHO05D004839 5.0e-78 295.0 184 80.4
Dinv24743 Davidia involucrata HOM05D004281 ORTHO05D004839 6.5e-78 294.7 192 81.2
Nn1g09410 Nelumbo nucifera HOM05D004281 ORTHO05D004839 1.4e-77 293.5 191 80.6
TWI15G0067 Tripterygium wilfordii HOM05D004281 ORTHO05D004839 1.4e-77 293.5 196 77.0
Atru.chr3.1980 Acer truncatum HOM05D004281 ORTHO05D004839 2.5e-77 292.7 192 77.6
PGR142G2669 Punica granatum HOM05D004281 ORTHO05D004839 2.5e-77 292.7 193 79.3
Potri.017G001800 Populus trichocarpa HOM05D004281 ORTHO05D004839 4.2e-77 292.0 190 75.3
TAR365G0664 Trochodendron aralioides HOM05D004281 ORTHO05D004839 4.2e-77 292.0 202 74.8
Atru.chr8.1217 Acer truncatum HOM05D004281 ORTHO05D004839 9.4e-77 290.8 192 75.0
Carub.0004s2660 Capsella rubella HOM05D004281 ORTHO05D004839 9.4e-77 290.8 188 76.6
COL.COLO4_27572 Corchorus olitorius HOM05D004281 ORTHO05D004839 9.4e-77 290.8 197 76.6
Rhsim09G0002300 Rhododendron simsii HOM05D000705 ORTHO05D002970 9.4e-77 290.8 224 68.3
Aa31LG1G25720 Aethionema arabicum HOM05D004281 ORTHO05D004839 1.6e-76 290.0 188 76.6
Thhalv10001807m.g Eutrema salsugineum HOM05D004281 ORTHO05D004839 1.6e-76 290.0 188 76.1
CiPaw.01G202700 Carya illinoinensis HOM05D004281 ORTHO05D004839 2.1e-76 289.7 188 76.6
Sp4g26130 Schrenkiella parvula HOM05D004281 ORTHO05D004839 2.1e-76 289.7 188 76.1
arahy.Tifrunner.gnm1.ann1.HHGT95 Arachis hypogaea HOM05D004281 ORTHO05D004839 2.7e-76 289.3 196 75.5
AL4G42920 Arabidopsis lyrata HOM05D004281 ORTHO05D004839 4.6e-76 288.5 184 77.7
CARHR139210 Cardamine hirsuta HOM05D004281 ORTHO05D004839 4.6e-76 288.5 190 74.7
CSS0036502 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 1.0e-75 287.3 165 88.5
AT2G44050 Arabidopsis thaliana HOM05D004281 ORTHO05D004839 2.3e-75 286.2 184 76.6
Actinidia18388 Actinidia chinensis HOM05D004281 ORTHO05D004839 3.0e-75 285.8 197 75.6
Glyma.08G087500 Glycine max HOM05D004281 ORTHO05D004839 3.0e-75 285.8 189 78.8
CSS0013668 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 5.1e-75 285.0 165 87.9
GSVIVG01038261001 Vitis vinifera HOM05D004281 ORTHO05D004839 6.7e-75 284.6 162 88.3
Ciclev10022149m.g Citrus clementina HOM05D004281 ORTHO05D004839 1.1e-74 283.9 193 73.6
ECA233G0955 Erigeron canadensis HOM05D004281 ORTHO05D004839 1.1e-74 283.9 201 73.6
Potri.007G146000 Populus trichocarpa HOM05D004281 ORTHO05D004839 1.5e-74 283.5 190 76.3
THA.LOC104802349 Tarenaya hassleriana HOM05D004281 ORTHO05D004839 1.5e-74 283.5 197 71.6
BcaB06g29353 Brassica carinata HOM05D004281 ORTHO05D004839 2.0e-74 283.1 188 75.5
BcaC02g07139 Brassica carinata HOM05D004281 ORTHO05D004839 2.5e-74 282.7 185 75.7
BolC4t28587H Brassica oleracea HOM05D004281 ORTHO05D004839 2.5e-74 282.7 185 75.7
Psat5g058760 Pisum sativum HOM05D004281 ORTHO05D004839 2.5e-74 282.7 191 75.9
Thecc.05G001000 Theobroma cacao HOM05D004281 ORTHO05D004839 2.5e-74 282.7 190 77.4
vmacro00726 Vaccinium macrocarpon HOM05D004281 ORTHO05D004839 2.5e-74 282.7 165 86.7
A03p24650 Brassica napus HOM05D004281 ORTHO05D004839 3.3e-74 282.3 188 75.5
BraA03t11671Z Brassica rapa HOM05D004281 ORTHO05D004839 3.3e-74 282.3 188 75.5
Psat7g088840 Pisum sativum HOM05D004281 ORTHO05D004839 3.3e-74 282.3 189 76.2
BolC3t15286H Brassica oleracea HOM05D004281 ORTHO05D004839 4.3e-74 282.0 188 74.5
Medtr4g094700 Medicago truncatula HOM05D004281 ORTHO05D004839 4.3e-74 282.0 192 73.4
BcaB01g03334 Brassica carinata HOM05D004281 ORTHO05D004839 5.7e-74 281.6 188 75.5
BraA04t18776Z Brassica rapa HOM05D004281 ORTHO05D004839 5.7e-74 281.6 188 75.0
Lalb_Chr12g0209091 Lupinus albus HOM05D004281 ORTHO05D004839 7.4e-74 281.2 197 71.6
MSTRG.24546 Avicennia marina HOM05D004281 ORTHO05D004839 1.3e-73 280.4 166 81.9
BcaB06g29512 Brassica carinata HOM05D004281 ORTHO05D004839 1.7e-73 280.0 195 71.8
Aa31LG10G14140 Aethionema arabicum HOM05D004281 ORTHO05D004839 2.2e-73 279.6 188 76.1
A04p33170 Brassica napus HOM05D004281 ORTHO05D004839 2.2e-73 279.6 185 75.1
HanXRQChr13g0392191 Helianthus annuus HOM05D004281 ORTHO05D004839 3.7e-73 278.9 170 80.6
Lj4g0008259 Lotus japonicus HOM05D004281 ORTHO05D004839 3.7e-73 278.9 186 77.4
Phvul.002G189800 Phaseolus vulgaris HOM05D004281 ORTHO05D004839 6.3e-73 278.1 187 76.5
Prupe.7G270800 Prunus persica HOM05D004281 ORTHO05D004839 6.3e-73 278.1 189 74.6
FvH4_1g00110 Fragaria vesca HOM05D004281 ORTHO05D004839 1.1e-72 277.3 183 78.1
Lalb_Chr13g0292401 Lupinus albus HOM05D004281 ORTHO05D004839 1.4e-72 276.9 190 74.2
SGA_v2.0_scaffold37G14906 Striga asiatica HOM05D004281 ORTHO05D004839 1.4e-72 276.9 221 67.9
RcHm_v2.0_Chr2g0084411 Rosa chinensis HOM05D004281 ORTHO05D004839 3.1e-72 275.8 168 82.1
Cc00_g16880 Coffea canephora HOM05D004281 ORTHO05D004839 6.9e-72 274.6 157 87.9
Sabra17G0005800 Salix brachista HOM05D004281 ORTHO05D004839 9.1e-72 274.2 187 71.7
Migut.G00913 Erythranthe guttata HOM05D004281 ORTHO05D004839 2.0e-71 273.1 188 73.9
PGR142G1214 Punica granatum HOM05D004281 ORTHO05D004839 2.0e-71 273.1 236 63.1
QL10p065802 Quercus lobata HOM05D004281 ORTHO05D004839 2.6e-71 272.7 189 75.7
C03p29390 Brassica napus HOM05D004281 ORTHO05D004839 1.0e-70 270.8 222 65.8
FvH4_2g10600 Fragaria vesca HOM05D004281 ORTHO05D004839 1.0e-70 270.8 173 78.0
FAN24G2282 Fragaria x ananassa HOM05D004281 ORTHO05D004839 1.0e-70 270.8 173 78.0
CDE09G0590 Ceratophyllum demersum HOM05D004281 ORTHO05D004839 2.9e-70 269.2 185 73.0
FAN15G1026 Fragaria x ananassa HOM05D004281 ORTHO05D004839 2.9e-70 269.2 173 78.0
Cc05_g03580 Coffea canephora HOM05D004281 ORTHO05D004839 3.8e-70 268.9 168 82.1
MD15G1142400 Malus domestica HOM05D004281 ORTHO05D004839 1.9e-69 266.5 169 75.1
Aqoxy7G00623 Aquilegia oxysepala HOM05D004281 ORTHO05D004839 3.2e-69 265.8 186 72.6
Lsat_1_v5_gn_8_33320 Lactuca sativa HOM05D004281 ORTHO05D004839 4.2e-69 265.4 165 77.0
BcaC01g05189 Brassica carinata HOM05D001249 ORTHO05D003440 7.2e-69 264.6 191 71.7
HanXRQChr13g0392171 Helianthus annuus HOM05D004281 ORTHO05D004839 7.2e-69 264.6 190 69.5
C04p70870 Brassica napus HOM05D001249 ORTHO05D003440 9.4e-69 264.2 177 74.0
HPP92_005601 Vanilla planifolia HOM05D004281 ORTHO05D004839 1.0e-67 260.8 189 73.5
VMungo0251G0005 Vigna mungo HOM05D004281 ORTHO05D004839 1.4e-67 260.4 176 76.1
Peaxi162Scf00459g00125 Petunia axillaris HOM05D004281 ORTHO05D004839 3.0e-67 259.2 186 71.0
Ca_18245_v3 Cicer arietinum L. HOM05D004281 ORTHO05D004839 5.1e-67 258.5 157 81.5
PSO732G0016 Papaver somniferum HOM05D004281 ORTHO05D004839 2.0e-66 256.5 170 77.1
Haze_11113 Corylus avellana HOM05D004281 ORTHO05D004839 2.6e-66 256.1 180 76.1
AUR62023693 Chenopodium quinoa HOM05D004281 ORTHO05D004839 3.3e-66 255.8 187 67.9
Lsat_1_v5_gn_8_33340 Lactuca sativa HOM05D004281 ORTHO05D004839 3.3e-66 255.8 138 89.1
EL10Ac3g06178 Beta vulgaris HOM05D004281 ORTHO05D004839 4.4e-66 255.4 187 68.4
Oeu014981.1 Olea europaea HOM05D004281 ORTHO05D004839 4.4e-66 255.4 146 86.3
PSO675G2617 Papaver somniferum HOM05D004281 ORTHO05D004839 4.4e-66 255.4 187 69.5
Sed0022244 Sechium edule HOM05D004281 ORTHO05D004839 4.4e-66 255.4 188 68.6
PGSC0003DMG400025217 Solanum tuberosum HOM05D004281 ORTHO05D004839 7.4e-66 254.6 186 69.4
CAN.G607.11 Capsicum annuum HOM05D004281 ORTHO05D004839 9.7e-66 254.2 195 66.7
FAN26G2986 Fragaria x ananassa HOM05D000705 ORTHO05D004839 1.3e-65 253.8 179 76.0
Sed0015421 Sechium edule HOM05D004281 ORTHO05D004839 1.3e-65 253.8 188 68.1
Solyc08g015660.3 Solanum lycopersicum HOM05D004281 ORTHO05D004839 1.3e-65 253.8 186 69.4
Sopen08g005770 Solanum pennellii HOM05D004281 ORTHO05D004839 1.3e-65 253.8 186 69.4
EL10Ac4g08581 Beta vulgaris HOM05D004281 ORTHO05D004839 3.7e-65 252.3 183 68.9
CsaV3_6G032410 Cucumis sativus L. HOM05D004281 ORTHO05D004839 3.7e-65 252.3 163 74.2
Solyc12g096590.3 Solanum lycopersicum HOM05D004281 ORTHO05D004839 6.3e-65 251.5 186 69.4
PGSC0003DMG400029273 Solanum tuberosum HOM05D004281 ORTHO05D004839 6.3e-65 251.5 188 69.1
Zm00001eb068110 Zea mays HOM05D004281 ORTHO05D004839 8.2e-65 251.1 199 66.3
Sopen12g032420 Solanum pennellii HOM05D004281 ORTHO05D004839 1.8e-64 250.0 186 68.8
Os04g0497400 Oryza sativa ssp. japonica HOM05D004281 ORTHO05D004839 3.1e-64 249.2 190 70.5
TPR.G31246 Trifolium pratense HOM05D004281 ORTHO05D004839 9.1e-64 247.7 185 71.9
CAN.G566.44 Capsicum annuum HOM05D004281 ORTHO05D004839 1.2e-63 247.3 163 73.6
Nitab4.5_0000668g0110 Nicotiana tabacum HOM05D004281 ORTHO05D004839 1.2e-63 247.3 165 74.5
Nitab4.5_0001110g0040 Nicotiana tabacum HOM05D004281 ORTHO05D004839 2.0e-63 246.5 165 74.5
AUR62002492 Chenopodium quinoa HOM05D004281 ORTHO05D004839 5.9e-63 245.0 203 63.1
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 5.9e-63 245.0 184 70.1
unitig_578.g16718 Utricularia gibba HOM05D000499 ORTHO05D007471 5.9e-63 245.0 156 75.0
Zm00001eb432360 Zea mays HOM05D004281 ORTHO05D004839 5.9e-63 245.0 190 66.8
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.9e-62 242.7 209 65.6
Cpa.g.sc9.245 Carica papaya HOM05D004281 ORTHO05D004839 3.8e-62 242.3 171 75.4
Ah.13g073140 Amaranthus hybridus HOM05D000705 ORTHO05D004839 5.5e-61 238.4 190 65.3
MELO3C011439.2 Cucumis melo HOM05D004281 ORTHO05D004839 7.2e-61 238.0 188 64.9
Pp3c27_2710 Physcomitrium patens HOM05D004281 ORTHO05D004839 7.2e-61 238.0 158 70.9
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 2.7e-60 236.1 133 88.7
Pp3c16_5700 Physcomitrium patens HOM05D004281 ORTHO05D004839 3.6e-60 235.7 158 72.8
SMO198G0030 Selaginella moellendorffii HOM05D004281 ORTHO05D004839 4.7e-60 235.3 158 68.4
QL10p064677 Quercus lobata HOM05D004281 ORTHO05D004839 6.1e-60 235.0 139 84.2
Lj4A426G8 Lonicera japonica HOM05D004281 ORTHO05D004839 2.0e-58 229.9 127 88.2
ClCG08G010210 Citrullus lanatus HOM05D004281 ORTHO05D004839 4.4e-58 228.8 137 77.4
RcHm_v2.0_Chr7g0227511 Rosa chinensis HOM05D004281 ORTHO05D004839 1.3e-57 227.3 132 83.3
Nitab4.5_0001091g0070 Nicotiana tabacum HOM05D004281 ORTHO05D004839 3.7e-57 225.7 161 69.6
ATR0743G183 Amborella trichopoda HOM05D004281 ORTHO05D004839 2.4e-56 223.0 127 82.7
Mapoly0120s0006 Marchantia polymorpha HOM05D004281 ORTHO05D004839 1.2e-55 220.7 164 65.2
TPR.G18090 Trifolium pratense HOM05D004281 ORTHO05D004839 5.2e-51 205.3 141 75.2
BcaB01g03343 Brassica carinata HOM05D001249 ORTHO05D003440 3.4e-50 202.6 136 76.5
MBI07_g44299_MAGBIO Magnolia biondii HOM05D004281 ORTHO05D004839 1.3e-49 200.7 157 69.4
QL08p018116 Quercus lobata HOM05D004281 ORTHO05D004839 6.3e-49 198.4 136 75.0
Duzib212G0492 Durio zibethinus HOM05D004281 ORTHO05D004839 1.8e-48 196.8 150 72.7
CBR_g29269 Chara braunii HOM05D004281 ORTHO05D004839 4.5e-47 192.2 141 61.7
Nitab4.5_0004802g0010 Nicotiana tabacum HOM05D004281 ORTHO05D004839 1.3e-46 190.7 134 67.9
Sc13g0007610 Simmondsia chinensis HOM05D004281 ORTHO05D004839 2.9e-46 189.5 156 67.9
Nitab4.5_0010298g0020 Nicotiana tabacum HOM05D004281 ORTHO05D004839 1.9e-45 186.8 186 55.9
Cre02.g088850 Chlamydomonas reinhardtii HOM05D004281 ORTHO05D004839 3.6e-44 182.6 145 58.6
unitig_85.g27225 Utricularia gibba HOM05D004281 ORTHO05D004839 8.0e-44 181.4 105 84.8
Hund22685 Selenicereus undatus HOM05D001165 ORTHO05D004839 1.8e-43 180.3 97 85.6
RcHm_v2.0_Chr7g0214271 Rosa chinensis HOM05D004281 ORTHO05D004839 4.9e-41 172.2 97 84.5
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 5.0e-38 162.2 179 47.5
Nitab4.5_0000013g0020 Nicotiana tabacum HOM05D004281 ORTHO05D004839 7.2e-37 158.3 141 58.9
Duzib093G0607 Durio zibethinus HOM05D004281 ORTHO05D004839 2.8e-36 156.4 116 71.6
Cc00_g12430 Coffea canephora HOM05D004281 ORTHO05D004839 1.7e-33 147.1 76 94.7
CSS0034557 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 4.9e-33 145.6 133 62.4
Cc00_g08810 Coffea canephora HOM05D004281 ORTHO05D004839 2.4e-32 143.3 77 92.2
Lj5A837G66 Lonicera japonica HOM05D004281 ORTHO05D004839 3.5e-31 139.4 74 89.2
CSS0012879 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 1.0e-30 137.9 168 53.0
Ca_28575_v3 Cicer arietinum L. HOM05D004281 ORTHO05D004839 1.0e-30 137.9 131 48.1
Cc00_g23590 Coffea canephora HOM05D004281 ORTHO05D004839 1.7e-30 137.1 86 81.4
CSS0024434 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 8.6e-30 134.8 133 60.2
C08p46660 Brassica napus HOM05D004281 ORTHO05D004839 8.0e-28 128.3 98 68.4
C05p19750 Brassica napus HOM05D004281 ORTHO05D004839 1.3e-25 120.9 96 65.6
Cc00_g34060 Coffea canephora HOM05D004281 ORTHO05D004839 2.9e-25 119.8 73 80.8
BolC8t52208H Brassica oleracea HOM05D004281 ORTHO05D004839 1.1e-24 117.9 128 53.1
TAR362G0423 Trochodendron aralioides HOM05D004281 ORTHO05D004839 3.0e-22 109.8 72 80.6
BcaC05g25876 Brassica carinata HOM05D004281 ORTHO05D004839 1.1e-19 101.3 70 71.4
QL08p018107 Quercus lobata HOM05D004281 ORTHO05D004839 8.3e-17 91.7 46 91.3
Cc00_g15820 Coffea canephora HOM05D004281 ORTHO05D004839 6.0e-15 85.5 103 52.4
Cc00_g15810 Coffea canephora HOM05D004281 ORTHO05D004839 7.8e-15 85.1 52 78.8
Cc00_g25460 Coffea canephora HOM05D004281 ORTHO05D004839 1.3e-14 84.3 42 95.2
Cc05_g00900 Coffea canephora HOM05D004281 ORTHO05D004839 1.7e-14 84.0 42 92.9
Lsat_1_v5_gn_8_13760 Lactuca sativa HOM05D004281 ORTHO05D004839 1.5e-13 80.9 125 44.8
Actinidia34560 Actinidia chinensis HOM05D028692 ORTHO05D015213 8.9e-11 71.6 37 89.2
Cfa027194 Carpinus fangiana HOM05D004281 ORTHO05D004839 1.2e-07 61.2 96 36.5
Cc05_g01000 Coffea canephora HOM05D004281 ORTHO05D004839 1.6e-07 60.8 33 84.8
Hma1.2p1_0872F.1_g231180 Hydrangea macrophylla HOM05D004281 ORTHO05D004839 3.5e-07 59.7 99 46.5
AagrBONN_evm.TU.Sc2ySwM_344.4461 Anthoceros agrestis HOM05D004281 ORTHO05D004839 6.0e-07 58.9 49 61.2
Cc05_g01010 Coffea canephora HOM05D004281 ORTHO05D004839 7.8e-07 58.5 32 87.5


User provided reference genes

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