Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 9.4e-90 333.6 177 100.0
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 2.3e-35 152.9 154 58.4
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 1.3e-33 147.1 126 65.9
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 2.1e-33 146.4 126 65.1
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 3.6e-33 145.6 126 61.1
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 6.2e-33 144.8 130 60.0
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 1.1e-32 144.1 126 62.7
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 4.0e-32 142.1 119 63.9
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 1.2e-31 140.6 126 60.3
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 1.5e-31 140.2 120 62.5
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 2.0e-31 139.8 117 65.0
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 3.4e-31 139.0 120 65.8
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 3.4e-31 139.0 161 54.0
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.3e-30 137.1 117 63.2
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 1.3e-30 137.1 126 59.5
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.3e-30 137.1 143 56.6
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 1.7e-30 136.7 126 60.3
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 1.7e-30 136.7 123 61.0
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.7e-30 136.7 126 60.3
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 2.2e-30 136.3 126 58.7
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 2.9e-30 136.0 121 61.2
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 4.9e-30 135.2 126 57.9
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 4.9e-30 135.2 129 59.7
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 6.4e-30 134.8 119 61.3
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 8.4e-30 134.4 125 60.0
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.1e-29 134.0 118 57.6
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.1e-29 134.0 126 60.3
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 1.4e-29 133.7 118 56.8
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 1.9e-29 133.3 126 59.5
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 1.9e-29 133.3 125 59.2
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 2.4e-29 132.9 120 60.8
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 2.4e-29 132.9 121 57.9
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 3.2e-29 132.5 121 63.6
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 5.4e-29 131.7 136 57.4
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 5.4e-29 131.7 123 58.5
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 7.1e-29 131.3 126 57.9
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 7.1e-29 131.3 136 53.7
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 7.1e-29 131.3 126 56.3
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 7.1e-29 131.3 126 55.6
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 9.3e-29 131.0 116 60.3
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 9.3e-29 131.0 126 58.7
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 1.2e-28 130.6 126 56.3
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 2.1e-28 129.8 121 57.9
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 2.1e-28 129.8 126 59.5
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 2.1e-28 129.8 126 59.5
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 2.7e-28 129.4 126 57.9
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 6.0e-28 128.3 126 54.8
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 6.0e-28 128.3 114 63.2
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 6.0e-28 128.3 126 57.1
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 7.9e-28 127.9 119 58.0
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 7.9e-28 127.9 126 59.5
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 7.9e-28 127.9 126 59.5
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 7.9e-28 127.9 126 55.6
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 7.9e-28 127.9 126 55.6
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 7.9e-28 127.9 126 57.1
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 7.9e-28 127.9 126 57.1
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 1.0e-27 127.5 120 58.3
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 1.3e-27 127.1 126 56.3
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 1.3e-27 127.1 153 49.7
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 1.3e-27 127.1 126 55.6
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.3e-27 127.1 123 56.9
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.3e-27 127.1 111 62.2
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.8e-27 126.7 127 54.3
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 1.8e-27 126.7 123 56.1
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 2.3e-27 126.3 131 58.0
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 2.3e-27 126.3 126 56.3
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 3.0e-27 125.9 143 49.7
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 3.0e-27 125.9 125 57.6
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 3.9e-27 125.6 113 61.1
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 3.9e-27 125.6 136 55.1
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.9e-27 125.6 126 56.3
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 3.9e-27 125.6 113 63.7
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 3.9e-27 125.6 121 57.0
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 5.1e-27 125.2 164 47.0
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 6.7e-27 124.8 126 54.8
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 8.7e-27 124.4 126 56.3
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 8.7e-27 124.4 121 56.2
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 1.1e-26 124.0 126 56.3
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.1e-26 124.0 126 54.0
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 1.1e-26 124.0 106 61.3
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 1.1e-26 124.0 99 61.6
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.5e-26 123.6 114 57.0
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.5e-26 123.6 120 58.3
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 1.5e-26 123.6 122 53.3
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 1.9e-26 123.2 120 60.0
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 4.3e-26 122.1 118 57.6
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 4.3e-26 122.1 120 58.3
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 5.6e-26 121.7 119 55.5
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 7.4e-26 121.3 117 58.1
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 2.1e-25 119.8 126 54.8
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 2.8e-25 119.4 131 55.7
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 3.7e-25 119.0 119 52.9
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 4.8e-25 118.6 126 55.6
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 4.8e-25 118.6 129 49.6
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 8.1e-25 117.9 118 54.2
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 8.1e-25 117.9 149 49.7
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 1.4e-24 117.1 118 54.2
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 2.4e-24 116.3 118 54.2
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 2.4e-24 116.3 118 54.2
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.4e-24 116.3 127 54.3
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 3.1e-24 115.9 118 53.4
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 3.1e-24 115.9 118 53.4
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 3.1e-24 115.9 118 53.4
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 3.1e-24 115.9 118 53.4
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 3.1e-24 115.9 118 53.4
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 5.3e-24 115.2 119 52.9
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 6.9e-24 114.8 119 52.9
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 9.0e-24 114.4 118 53.4
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 9.0e-24 114.4 118 52.5
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 1.2e-23 114.0 118 53.4
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.2e-23 114.0 114 55.3
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 4.5e-23 112.1 126 53.2
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 4.5e-23 112.1 127 48.0
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.7e-22 110.2 111 55.9
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 2.2e-22 109.8 107 52.3
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 2.2e-22 109.8 107 53.3
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 2.9e-22 109.4 127 52.8
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 4.9e-22 108.6 117 53.0
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 6.5e-22 108.2 94 61.7
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 1.9e-21 106.7 126 46.0
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 1.9e-21 106.7 107 52.3
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 2.5e-21 106.3 70 74.3
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 6.0e-20 101.7 95 56.8
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 2.3e-19 99.8 74 68.9
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 8.7e-19 97.8 143 39.2
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 9.6e-18 94.4 69 71.0
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.3e-17 94.0 68 70.6
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 4.8e-17 92.0 149 42.3
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.1e-16 90.9 66 68.2
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 1.2e-15 87.4 103 45.6
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 3.4e-15 85.9 107 41.1
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 1.7e-14 83.6 105 39.0
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.5e-13 79.7 58 67.2
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.8e-11 73.6 98 38.8
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 3.7e-09 65.9 95 44.2
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.0e-07 60.1 51 54.9


User provided reference genes

Program Settings