Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 2.0e-87 325.9 177 100.0
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.3e-30 137.1 124 68.5
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.7e-30 136.7 106 74.5
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 6.4e-30 134.8 85 81.2
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 6.4e-30 134.8 85 81.2
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.4e-29 133.7 86 83.7
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 4.2e-29 132.1 86 80.2
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 4.2e-29 132.1 156 56.4
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 7.1e-29 131.3 86 80.2
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 7.1e-29 131.3 86 80.2
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 9.3e-29 131.0 82 84.1
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.2e-28 130.6 149 57.7
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 1.2e-28 130.6 149 57.7
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 1.2e-28 130.6 176 52.3
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 1.6e-28 130.2 86 80.2
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 2.1e-28 129.8 180 51.7
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 3.5e-28 129.0 86 79.1
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 4.6e-28 128.6 121 66.1
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 7.9e-28 127.9 86 79.1
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 7.9e-28 127.9 86 77.9
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 3.9e-27 125.6 89 74.2
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 5.1e-27 125.2 86 79.1
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 5.1e-27 125.2 86 79.1
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 6.7e-27 124.8 86 76.7
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 6.7e-27 124.8 89 75.3
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 8.7e-27 124.4 183 50.8
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 8.7e-27 124.4 108 68.5
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 8.7e-27 124.4 86 75.6
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 1.1e-26 124.0 171 53.2
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 1.5e-26 123.6 83 78.3
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.5e-26 123.6 86 75.6
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 1.9e-26 123.2 86 76.7
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 1.9e-26 123.2 85 75.3
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 1.9e-26 123.2 82 75.6
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 2.5e-26 122.9 86 74.4
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 3.3e-26 122.5 81 77.8
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 3.3e-26 122.5 86 76.7
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.3e-26 122.5 86 75.6
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 3.3e-26 122.5 86 75.6
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 7.4e-26 121.3 81 80.2
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 7.4e-26 121.3 85 75.3
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 9.6e-26 120.9 195 47.2
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 9.6e-26 120.9 84 76.2
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 9.6e-26 120.9 86 73.3
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.3e-25 120.6 100 69.0
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 1.3e-25 120.6 84 73.8
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.3e-25 120.6 86 74.4
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 1.6e-25 120.2 81 79.0
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.6e-25 120.2 89 71.9
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.6e-25 120.2 84 76.2
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 2.1e-25 119.8 178 47.8
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 2.1e-25 119.8 89 71.9
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 2.1e-25 119.8 86 74.4
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 2.1e-25 119.8 86 73.3
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.8e-25 119.4 80 77.5
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.8e-25 119.4 80 77.5
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 2.8e-25 119.4 86 73.3
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 2.8e-25 119.4 86 73.3
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 2.8e-25 119.4 188 48.9
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 3.7e-25 119.0 86 73.3
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 3.7e-25 119.0 86 72.1
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 4.8e-25 118.6 86 72.1
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 4.8e-25 118.6 86 72.1
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 4.8e-25 118.6 180 46.7
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 6.2e-25 118.2 88 70.5
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 6.2e-25 118.2 88 70.5
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 6.2e-25 118.2 88 70.5
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.2e-25 118.2 86 72.1
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.2e-25 118.2 86 72.1
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 6.2e-25 118.2 86 72.1
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 8.1e-25 117.9 106 62.3
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 8.1e-25 117.9 87 69.0
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 8.1e-25 117.9 82 76.8
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 8.1e-25 117.9 77 79.2
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 1.1e-24 117.5 106 62.3
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.1e-24 117.5 86 72.1
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 1.1e-24 117.5 174 46.6
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 1.4e-24 117.1 180 46.7
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 1.8e-24 116.7 83 69.9
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 2.4e-24 116.3 174 46.0
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 2.4e-24 116.3 174 46.6
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 4.0e-24 115.5 88 69.3
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 5.3e-24 115.2 81 74.1
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 5.3e-24 115.2 146 52.7
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 5.3e-24 115.2 146 52.7
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 6.9e-24 114.8 97 67.0
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 6.9e-24 114.8 147 52.4
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 9.0e-24 114.4 94 66.0
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.2e-23 114.0 150 49.3
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.2e-23 114.0 150 49.3
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 1.2e-23 114.0 150 51.3
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 1.2e-23 114.0 86 70.9
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.5e-23 113.6 80 73.8
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 1.5e-23 113.6 89 73.0
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 3.4e-23 112.5 89 73.0
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 3.4e-23 112.5 174 45.4
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 4.5e-23 112.1 171 45.6
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 7.6e-23 111.3 89 66.3
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.0e-22 110.9 89 66.3
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 1.7e-22 110.2 162 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 4.9e-22 108.6 112 56.2
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 4.9e-22 108.6 180 47.8
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 1.1e-21 107.5 76 72.4
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 1.1e-21 107.5 177 46.3
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 7.1e-21 104.8 86 67.4
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 2.1e-20 103.2 119 55.5
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 3.5e-20 102.4 98 59.2
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 7.9e-20 101.3 81 64.2
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.3e-19 100.5 86 67.4
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 1.9e-18 96.7 81 61.7
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 5.7e-18 95.1 65 75.4
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 4.5e-15 85.5 81 56.8
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 3.5e-12 75.9 85 50.6
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 3.5e-12 75.9 86 50.0
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.6e-12 75.5 81 53.1
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.9e-10 70.1 81 50.6
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 9.0e-08 61.2 43 69.8


User provided reference genes

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