Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02657 Eucalyptus grandis HOM05D007884 ORTHO05D009968 9.8e-230 800.0 485 100.0
Haze_13924 Corylus avellana HOM05D007884 ORTHO05D009968 3.0e-77 293.5 422 48.6
Cfa008093 Carpinus fangiana HOM05D007884 ORTHO05D009968 5.6e-76 289.3 435 40.0
CiPaw.03G016000 Carya illinoinensis HOM05D007884 ORTHO05D009968 2.0e-73 280.8 377 58.4
QL09p002129 Quercus lobata HOM05D007884 ORTHO05D009968 1.7e-69 267.7 434 39.2
Dinv09394 Davidia involucrata HOM05D007884 ORTHO05D009968 5.1e-69 266.2 381 58.3
Thecc.08G176500 Theobroma cacao HOM05D007884 ORTHO05D009968 9.9e-65 251.9 397 53.7
Lj9P699T19 Lonicera japonica HOM05D007884 ORTHO05D009968 1.3e-64 251.5 377 58.4
Prupe.1G544500 Prunus persica HOM05D007884 ORTHO05D009968 4.9e-64 249.6 430 42.1
PGR031G2984 Punica granatum HOM05D007884 ORTHO05D009968 1.2e-62 245.0 406 45.6
Potri.019G075900 Populus trichocarpa HOM05D007884 ORTHO05D009968 1.6e-62 244.6 414 38.2
Hma1.2p1_0004F.1_g003780 Hydrangea macrophylla HOM05D007884 ORTHO05D009968 1.0e-61 241.9 413 52.1
CANSAT25G3642 Cannabis sativa HOM05D007884 ORTHO05D009968 1.3e-61 241.5 417 41.0
ClCG10G005030 Citrullus lanatus HOM05D007884 ORTHO05D009968 1.3e-61 241.5 417 49.6
Duzib177G0356 Durio zibethinus HOM05D007884 ORTHO05D009968 3.0e-61 240.4 381 56.7
Actinidia29389 Actinidia chinensis HOM05D007884 ORTHO05D009968 1.5e-60 238.0 351 57.3
Gorai.001G097200 Gossypium raimondii HOM05D007884 ORTHO05D009968 4.3e-60 236.5 380 49.5
Gohir.D07G090700 Gossypium hirsutum HOM05D007884 ORTHO05D009968 7.3e-60 235.7 380 50.0
Sabra19G0086300 Salix brachista HOM05D007884 ORTHO05D009968 1.6e-59 234.6 414 42.3
Sc26g0002320 Simmondsia chinensis HOM05D007884 ORTHO05D009968 4.8e-59 233.0 374 54.8
Gohir.A07G085300 Gossypium hirsutum HOM05D007884 ORTHO05D009968 3.1e-58 230.3 376 48.4
TAR383G0946 Trochodendron aralioides HOM05D007884 ORTHO05D009968 4.5e-57 226.5 423 50.1
CsaV3_4G033680 Cucumis sativus L. HOM05D007884 ORTHO05D009968 1.4e-55 221.5 407 46.9
MSTRG.1590 Avicennia marina HOM05D007884 ORTHO05D009968 9.3e-55 218.8 386 49.5
CSS0033652 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 1.6e-54 218.0 375 54.7
CSS0035845 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 1.6e-54 218.0 375 54.7
Sed0007017 Sechium edule HOM05D007884 ORTHO05D009968 2.7e-54 217.2 422 34.8
Ciclev10019950m.g Citrus clementina HOM05D007884 ORTHO05D009968 3.5e-54 216.9 378 55.0
COL.COLO4_22419 Corchorus olitorius HOM05D007884 ORTHO05D009968 4.6e-54 216.5 353 53.0
Aqoxy7G02021 Aquilegia oxysepala HOM05D007884 ORTHO05D009968 7.9e-54 215.7 378 48.9
DCAR_014075 Daucus carota HOM05D007884 ORTHO05D009968 1.9e-52 211.1 365 51.0
Nitab4.5_0005550g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 1.9e-52 211.1 367 52.9
EL10Ac1g01640 Beta vulgaris HOM05D007884 ORTHO05D009968 2.5e-52 210.7 400 50.8
Nitab4.5_0006974g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 5.6e-52 209.5 368 43.2
PSO242G0004 Papaver somniferum HOM05D007884 ORTHO05D009968 1.3e-51 208.4 378 54.2
Oeu023202.1 Olea europaea HOM05D007884 ORTHO05D009968 2.8e-51 207.2 365 54.5
MD08G1213200 Malus domestica HOM05D007884 ORTHO05D009968 1.4e-50 204.9 368 52.2
CAN.G63.2 Capsicum annuum HOM05D007884 ORTHO05D009968 1.8e-50 204.5 364 53.3
PGSC0003DMG400013578 Solanum tuberosum HOM05D007884 ORTHO05D009968 1.8e-50 204.5 364 52.5
TWI75G0081 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 2.4e-50 204.1 415 51.6
Nn4g26038 Nelumbo nucifera HOM05D007884 ORTHO05D009968 3.1e-50 203.8 374 53.2
Lj2g0010779 Lotus japonicus HOM05D007884 ORTHO05D009968 4.0e-50 203.4 371 48.2
Nn3g17503 Nelumbo nucifera HOM05D007884 ORTHO05D009968 5.3e-50 203.0 374 52.9
Ah.05g168770 Amaranthus hybridus HOM05D007884 ORTHO05D009968 6.9e-50 202.6 358 56.1
SGA_v2.0_scaffold118G32599 Striga asiatica HOM05D007884 ORTHO05D009968 1.2e-49 201.8 378 47.4
Psat1g062080 Pisum sativum HOM05D007884 ORTHO05D009968 4.9e-48 196.4 383 48.3
MELO3C016698.2 Cucumis melo HOM05D007884 ORTHO05D009968 6.4e-48 196.1 332 49.1
Lsat_1_v5_gn_4_133080 Lactuca sativa HOM05D007884 ORTHO05D009968 4.2e-47 193.4 424 45.5
Medtr6g017035 Medicago truncatula HOM05D007884 ORTHO05D009968 1.6e-46 191.4 371 48.0
Cc11_g04640 Coffea canephora HOM05D007884 ORTHO05D009968 2.7e-46 190.7 370 32.7
HanXRQChr17g0559001 Helianthus annuus HOM05D007884 ORTHO05D009968 3.5e-46 190.3 406 46.1
Migut.C01368 Erythranthe guttata HOM05D007884 ORTHO05D009968 4.6e-46 189.9 345 49.3
Phvul.003G017800 Phaseolus vulgaris HOM05D007884 ORTHO05D009968 6.0e-46 189.5 370 47.0
Sopen07g021970 Solanum pennellii HOM05D007884 ORTHO05D009968 6.7e-45 186.0 364 51.4
AUR62022398 Chenopodium quinoa HOM05D007884 ORTHO05D009968 8.7e-45 185.7 365 50.1
Glyma.19G044700 Glycine max HOM05D007884 ORTHO05D009968 1.8e-42 177.9 372 47.6
HPP92_008446 Vanilla planifolia HOM05D007884 ORTHO05D009968 3.1e-42 177.2 371 50.4
VMungo1309G1853 Vigna mungo HOM05D007884 ORTHO05D009968 7.6e-41 172.6 370 45.9
Lalb_Chr02g0158331 Lupinus albus HOM05D007884 ORTHO05D009968 1.0e-40 172.2 380 48.2
TPR.G21024 Trifolium pratense HOM05D007884 ORTHO05D009968 1.0e-40 172.2 371 48.5
TWI18G0215 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 1.3e-40 171.8 331 35.3
MBI04_g00944_MAGBIO Magnolia biondii HOM05D007884 ORTHO05D009968 1.7e-40 171.4 243 42.0
HPP92_008463 Vanilla planifolia HOM05D007884 ORTHO05D009968 1.7e-40 171.4 369 48.5
Cpa.g.sc21.77 Carica papaya HOM05D007884 ORTHO05D009968 1.9e-39 167.9 277 57.0
FvH4_5g33340 Fragaria vesca HOM05D007884 ORTHO05D009968 2.3e-37 161.0 375 30.1
FAN18G0070 Fragaria x ananassa HOM05D007884 ORTHO05D009968 2.3e-37 161.0 375 30.1
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 9.7e-36 155.6 421 28.0
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 2.0e-33 147.9 379 29.0
Os03g0119700 Oryza sativa ssp. japonica HOM05D007884 ORTHO05D009968 9.4e-31 139.0 393 28.0
FAN04G3024 Fragaria x ananassa HOM05D007884 ORTHO05D009968 1.6e-30 138.3 377 29.2
Ca_26346_v3 Cicer arietinum L. HOM05D007884 ORTHO05D009968 1.4e-29 135.2 276 31.9
Manes.18G118701 Manihot esculenta HOM05D007884 ORTHO05D009968 1.8e-29 134.8 289 47.8
FAN08G1312 Fragaria x ananassa HOM05D007884 ORTHO05D009968 4.3e-28 130.2 303 30.0
AUR62043537 Chenopodium quinoa HOM05D007884 ORTHO05D009968 1.7e-27 128.3 287 52.6
Atru.chr13.2470 Acer truncatum HOM05D007884 ORTHO05D009968 8.2e-27 125.9 285 54.7
ATR0716G085 Amborella trichopoda HOM05D007884 ORTHO05D009968 1.1e-23 115.5 350 48.0
CDE04G2395 Ceratophyllum demersum HOM05D007884 ORTHO05D009968 7.2e-23 112.8 248 56.5
ECA232G0955 Erigeron canadensis HOM05D007884 ORTHO05D009968 1.3e-19 102.1 289 48.4
SEGI_26452 Sequoiadendron giganteum HOM05D007884 ORTHO05D009968 1.8e-13 81.6 377 41.1
CAN.G6574.1 Capsicum annuum HOM05D007884 ORTHO05D009968 7.4e-12 76.3 185 64.3
SEGI_24584 Sequoiadendron giganteum HOM05D000424 ORTHO05D000355 4.2e-07 60.5 199 22.6


User provided reference genes

Program Settings