Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02549 Eucalyptus grandis HOM05D008630 ORTHO05D010727 4.4e-56 221.1 114 100.0
TWI18G0017 Tripterygium wilfordii HOM05D008630 ORTHO05D010727 4.8e-18 94.7 107 50.5
Thecc.06G073200 Theobroma cacao HOM05D008630 ORTHO05D010727 4.5e-16 88.2 98 57.1
Duzib192G0134 Durio zibethinus HOM05D008630 ORTHO05D010727 6.4e-15 84.3 104 52.9
Cpa.g.sc336.6 Carica papaya HOM05D008630 ORTHO05D010727 1.1e-14 83.6 86 52.3
Sed0009523 Sechium edule HOM05D008630 ORTHO05D010727 3.2e-14 82.0 104 49.0
THA.LOC104818037 Tarenaya hassleriana HOM05D008630 ORTHO05D010727 7.1e-14 80.9 99 50.5
Duzib235G0863 Durio zibethinus HOM05D008630 ORTHO05D010727 2.1e-13 79.3 102 51.0
MELO3C023400.2 Cucumis melo HOM05D008630 ORTHO05D010727 2.7e-13 79.0 87 51.7
PGR102G1667 Punica granatum HOM05D008630 ORTHO05D010727 4.6e-13 78.2 109 46.8
THA.LOC104810501 Tarenaya hassleriana HOM05D008630 ORTHO05D010727 7.9e-13 77.4 109 46.8
Potri.001G172900 Populus trichocarpa HOM05D008630 ORTHO05D010727 1.0e-12 77.0 87 51.7
BraA08t32251Z Brassica rapa HOM05D008630 ORTHO05D010727 1.8e-12 76.3 120 43.3
A08p01970 Brassica napus HOM05D008630 ORTHO05D010727 2.3e-12 75.9 120 43.3
Dinv38096 Davidia involucrata HOM05D008630 ORTHO05D010727 3.0e-12 75.5 125 42.4
Sabra03G0035300 Salix brachista HOM05D008630 ORTHO05D010727 3.0e-12 75.5 116 44.8
QL05p027788 Quercus lobata HOM05D008630 ORTHO05D010727 6.7e-12 74.3 98 48.0
Duzib160G0171 Durio zibethinus HOM05D008630 ORTHO05D010727 1.1e-11 73.6 106 49.1
Duzib160G0348 Durio zibethinus HOM05D008630 ORTHO05D010727 1.1e-11 73.6 106 49.1
Thhalv10011854m.g Eutrema salsugineum HOM05D008630 ORTHO05D010727 6.2e-10 67.8 120 40.0
BolC3t21401H Brassica oleracea HOM05D008630 ORTHO05D010727 8.1e-10 67.4 120 40.8
BcaC08g43443 Brassica carinata HOM05D008630 ORTHO05D010727 3.1e-09 65.5 118 40.7
C06p08110 Brassica napus HOM05D008630 ORTHO05D010727 3.1e-09 65.5 118 40.7
BolC6t35894H Brassica oleracea HOM05D008630 ORTHO05D010727 3.1e-09 65.5 118 40.7
Sp1g13780 Schrenkiella parvula HOM05D010527 ORTHO05D013747 3.1e-09 65.5 117 39.3
BcaB02g10977 Brassica carinata HOM05D008630 ORTHO05D010727 4.0e-09 65.1 106 39.6
BcaC08g44009 Brassica carinata HOM05D008630 ORTHO05D010727 5.3e-09 64.7 110 40.0
A05p18860 Brassica napus HOM05D008630 ORTHO05D010727 5.3e-09 64.7 114 39.5
BraA05t20782Z Brassica rapa HOM05D008630 ORTHO05D010727 5.3e-09 64.7 114 39.5
C06p14210 Brassica napus HOM05D008630 ORTHO05D010727 9.0e-09 63.9 109 39.4
AT1G52680 Arabidopsis thaliana HOM05D008630 ORTHO05D010727 1.5e-08 63.2 120 35.0
A06p01690 Brassica napus HOM05D008630 ORTHO05D010727 1.5e-08 63.2 107 41.1
BraA06t23387Z Brassica rapa HOM05D008630 ORTHO05D010727 1.5e-08 63.2 107 41.1
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 1.5e-08 63.2 83 44.6
AL1G60950 Arabidopsis lyrata HOM05D008630 ORTHO05D010727 2.0e-08 62.8 116 38.8
MD17G1204300 Malus domestica HOM05D008630 ORTHO05D010727 2.0e-08 62.8 132 34.8
GSVIVG01017248001 Vitis vinifera HOM05D008630 ORTHO05D010727 2.0e-08 62.8 47 74.5
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 3.4e-08 62.0 86 46.5
Atru.chr1.3122 Acer truncatum HOM05D028706 ORTHO05D026224 4.5e-08 61.6 125 36.0
Thhalv10009177m.g Eutrema salsugineum HOM05D010527 ORTHO05D013747 4.5e-08 61.6 117 38.5
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 5.8e-08 61.2 76 47.4
Atru.chr1.3096 Acer truncatum HOM05D028706 ORTHO05D026224 1.7e-07 59.7 125 35.2
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 1.7e-07 59.7 79 44.3
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.2e-07 59.3 76 47.4
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 2.2e-07 59.3 78 46.2
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 2.9e-07 58.9 79 44.3
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 2.9e-07 58.9 80 47.5
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 3.8e-07 58.5 81 43.2
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 3.8e-07 58.5 78 47.4
BcaB03g13062 Brassica carinata HOM05D010527 ORTHO05D013747 4.9e-07 58.2 111 38.7
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 6.4e-07 57.8 80 46.2
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 8.4e-07 57.4 78 43.6
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 8.4e-07 57.4 79 41.8
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 8.4e-07 57.4 72 47.2
Sp1g39220 Schrenkiella parvula HOM05D008630 ORTHO05D010727 8.4e-07 57.4 107 39.3
Atru.chr1.3124 Acer truncatum HOM05D028706 ORTHO05D026224 1.1e-06 57.0 126 35.7
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 1.1e-06 57.0 78 43.6
Atru.chr1.3094 Acer truncatum HOM05D028706 ORTHO05D026224 1.4e-06 56.6 117 36.8
BraA06t24324Z Brassica rapa HOM05D010527 ORTHO05D013747 1.9e-06 56.2 122 36.9
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.9e-06 56.2 74 43.2
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.4e-06 55.8 74 44.6
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.4e-06 55.8 78 37.2
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.2e-06 55.5 79 35.4
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 4.2e-06 55.1 78 42.3
AT1G15415 Arabidopsis thaliana HOM05D010527 ORTHO05D013747 7.1e-06 54.3 117 35.9
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 7.1e-06 54.3 74 44.6
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 7.1e-06 54.3 81 40.7
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 7.1e-06 54.3 85 44.7
BolC5t30095H Brassica oleracea HOM05D010527 ORTHO05D013747 9.3e-06 53.9 122 34.4
Carub.0001s4167 Capsella rubella HOM05D008630 ORTHO05D010727 9.3e-06 53.9 112 34.8
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 9.3e-06 53.9 80 41.2


User provided reference genes

Program Settings