Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 1.2e-71 273.1 142 100.0
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 1.4e-56 223.0 142 81.0
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.9e-56 222.6 142 83.1
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.9e-56 222.6 142 83.1
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 9.3e-56 220.3 142 80.3
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 1.2e-55 219.9 141 80.1
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 2.3e-54 215.7 143 80.4
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 3.9e-54 214.9 142 78.9
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 1.9e-53 212.6 142 77.5
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 5.7e-53 211.1 136 79.4
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 9.7e-53 210.3 142 76.8
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.6e-52 209.5 142 78.9
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 1.6e-52 209.5 142 78.2
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 6.3e-52 207.6 142 76.8
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 1.8e-51 206.1 142 76.8
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 9.1e-51 203.8 142 73.2
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 9.1e-51 203.8 142 76.8
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 9.1e-51 203.8 142 76.8
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 2.0e-50 202.6 135 78.5
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 5.9e-50 201.1 154 72.1
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 5.9e-50 201.1 144 76.4
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 1.7e-49 199.5 142 76.1
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 3.8e-49 198.4 146 76.0
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 3.8e-49 198.4 166 65.1
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 5.0e-49 198.0 142 76.1
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 6.5e-49 197.6 135 76.3
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 1.1e-48 196.8 144 72.9
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 1.4e-48 196.4 142 75.4
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 1.9e-48 196.1 142 75.4
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 1.9e-48 196.1 142 74.6
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 2.5e-48 195.7 142 74.6
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.5e-48 195.7 142 74.6
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 2.5e-48 195.7 142 72.5
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 2.5e-48 195.7 141 75.2
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 3.2e-48 195.3 142 75.4
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 5.5e-48 194.5 142 75.4
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 9.4e-48 193.7 142 73.2
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 2.1e-47 192.6 143 74.1
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 2.7e-47 192.2 136 73.5
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 2.7e-47 192.2 142 72.5
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 3.6e-47 191.8 144 75.0
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 3.6e-47 191.8 142 73.2
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 4.6e-47 191.4 143 74.1
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 4.6e-47 191.4 143 74.1
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 6.1e-47 191.0 140 73.6
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 6.1e-47 191.0 144 72.2
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 6.1e-47 191.0 144 72.2
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 6.1e-47 191.0 142 73.2
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 6.1e-47 191.0 163 65.6
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 1.0e-46 190.3 151 70.9
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 1.4e-46 189.9 137 75.2
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 1.4e-46 189.9 122 79.5
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 1.8e-46 189.5 142 73.9
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.8e-46 189.5 122 79.5
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 3.0e-46 188.7 122 78.7
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 5.1e-46 188.0 147 71.4
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 5.1e-46 188.0 146 69.9
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 6.7e-46 187.6 142 71.8
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 6.7e-46 187.6 143 72.7
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 6.7e-46 187.6 142 71.8
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 1.1e-45 186.8 127 78.7
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 1.1e-45 186.8 142 71.1
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 1.1e-45 186.8 142 71.8
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 2.0e-45 186.0 142 71.1
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 2.0e-45 186.0 131 77.9
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.0e-45 186.0 142 71.8
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 2.0e-45 186.0 142 71.8
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.6e-45 185.7 122 77.9
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 2.6e-45 185.7 142 72.5
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 4.4e-45 184.9 127 76.4
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 7.4e-45 184.1 142 70.4
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 2.2e-44 182.6 110 87.3
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 4.8e-44 181.4 116 81.0
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 8.2e-44 180.6 142 69.7
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 2.4e-43 179.1 134 71.6
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 3.1e-43 178.7 158 65.2
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 3.1e-43 178.7 142 69.0
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 3.1e-43 178.7 118 80.5
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 4.1e-43 178.3 142 68.3
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 5.3e-43 177.9 142 69.0
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 6.9e-43 177.6 142 68.3
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 1.2e-42 176.8 142 68.3
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 1.5e-42 176.4 143 67.8
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 1.5e-42 176.4 139 69.8
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 3.4e-42 175.3 143 68.5
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 5.9e-42 174.5 146 65.1
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 8.5e-41 170.6 142 64.8
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 3.2e-40 168.7 142 66.9
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 1.2e-39 166.8 142 63.4
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 1.6e-39 166.4 145 65.5
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 1.6e-39 166.4 145 65.5
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 1.6e-39 166.4 146 63.0
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 7.9e-39 164.1 129 67.4
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 3.0e-38 162.2 138 65.9
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 1.1e-37 160.2 136 66.9
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 4.4e-37 158.3 146 61.0
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 7.4e-37 157.5 139 61.9
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 2.8e-36 155.6 119 71.4
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 2.4e-35 152.5 118 70.3
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 1.9e-32 142.9 139 62.6
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 1.9e-32 142.9 126 63.5
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 2.7e-31 139.0 105 73.3
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 8.0e-31 137.5 102 74.5
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 2.0e-29 132.9 101 72.3
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 2.6e-29 132.5 103 69.9
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 2.6e-29 132.5 150 54.7
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 3.3e-29 132.1 87 79.3
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 4.4e-29 131.7 136 58.1
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 4.4e-29 131.7 100 72.0
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 7.5e-29 131.0 136 58.1
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 1.7e-28 129.8 147 54.4
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 1.7e-28 129.8 83 81.9
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 2.2e-28 129.4 112 63.4
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 2.8e-28 129.0 136 57.4
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 3.7e-28 128.6 136 57.4
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 3.7e-28 128.6 136 57.4
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 4.8e-28 128.3 136 57.4
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 6.3e-28 127.9 95 71.6
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 8.2e-28 127.5 85 77.6
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 1.8e-27 126.3 117 57.3
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 1.8e-27 126.3 138 55.8
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 1.6e-26 123.2 84 78.6
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 5.9e-26 121.3 73 83.6
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 1.1e-24 117.1 125 52.8
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 1.2e-23 113.6 163 46.0
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 1.4e-22 110.2 73 79.5
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 1.4e-22 110.2 92 64.1
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 1.1e-19 100.5 117 47.9
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 5.5e-16 88.2 127 44.9
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 2.3e-14 82.8 114 48.2
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.1e-11 72.4 42 81.0
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 4.1e-11 72.0 84 52.4
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.2e-10 70.5 63 55.6
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 2.3e-09 66.2 85 49.4


User provided reference genes

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