Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 7.1e-34 146.7 77 100.0
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 1.9e-23 112.1 78 76.9
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 9.6e-23 109.8 77 75.3
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 1.6e-22 109.0 73 79.5
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 1.1e-21 106.3 76 76.3
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 1.4e-21 105.9 77 72.7
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 1.8e-21 105.5 73 76.7
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 3.1e-21 104.8 77 72.7
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 6.9e-21 103.6 73 76.7
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 6.9e-21 103.6 77 70.1
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.2e-20 102.8 73 72.6
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 1.2e-20 102.8 73 72.6
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 1.5e-20 102.4 72 77.8
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 2.0e-20 102.1 77 72.7
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 3.4e-20 101.3 76 75.0
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 5.9e-20 100.5 75 72.0
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 5.9e-20 100.5 77 68.8
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 7.6e-20 100.1 77 72.7
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 7.6e-20 100.1 68 79.4
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 1.3e-19 99.4 78 73.1
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 1.3e-19 99.4 78 71.8
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 1.7e-19 99.0 75 72.0
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 3.8e-19 97.8 68 76.5
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 5.0e-19 97.4 77 70.1
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 1.1e-18 96.3 75 70.7
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 1.1e-18 96.3 75 70.7
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 1.1e-18 96.3 78 71.8
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 1.4e-18 95.9 77 68.8
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 1.9e-18 95.5 78 67.9
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 1.9e-18 95.5 78 67.9
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 4.2e-18 94.4 79 69.6
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 5.5e-18 94.0 77 67.5
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.6e-17 91.3 71 70.4
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 3.6e-17 91.3 78 66.7
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 4.6e-17 90.9 91 59.3
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 4.6e-17 90.9 78 67.9
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 7.9e-17 90.1 78 65.4
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 1.0e-16 89.7 75 65.3
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 1.0e-16 89.7 78 65.4
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 2.3e-16 88.6 75 66.7
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 2.3e-16 88.6 78 64.1
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 8.7e-16 86.7 76 61.8
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 1.1e-15 86.3 75 64.0
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 1.1e-15 86.3 78 64.1
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 1.5e-15 85.9 75 66.7
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 2.5e-15 85.1 73 68.5
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 3.3e-15 84.7 78 61.5
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 4.3e-15 84.3 77 64.9
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 7.4e-15 83.6 72 66.7
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 7.4e-15 83.6 72 66.7
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 9.7e-15 83.2 75 61.3
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 9.7e-15 83.2 78 65.4
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 1.3e-14 82.8 78 65.4
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 1.6e-14 82.4 72 66.7
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 1.6e-14 82.4 72 66.7
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 2.2e-14 82.0 73 67.1
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 2.8e-14 81.6 71 64.8
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 4.8e-14 80.9 87 58.6
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 6.3e-14 80.5 75 61.3
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 8.2e-14 80.1 72 62.5
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 1.1e-13 79.7 71 63.4
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 1.1e-13 79.7 77 63.6
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 1.4e-13 79.3 72 62.5
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 1.8e-13 79.0 75 60.0
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 9.1e-13 76.6 74 62.2
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 1.5e-12 75.9 88 52.3
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 3.4e-12 74.7 74 55.4
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 3.4e-12 74.7 92 55.4
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 4.5e-12 74.3 77 58.4
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 5.9e-12 73.9 74 55.4
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.3e-11 72.8 77 54.5
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 2.9e-11 71.6 91 51.6
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 1.4e-10 69.3 83 55.4
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 1.9e-10 68.9 102 47.1
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 3.2e-10 68.2 79 51.9
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 4.2e-10 67.8 77 55.8
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 9.4e-10 66.6 77 55.8
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.0e-08 63.2 72 51.4
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 1.1e-07 59.7 72 56.9
Peaxi162Scf00003g01523 Petunia axillaris HOM05D007769 ORTHO05D009588 3.7e-06 54.7 39 74.4
GSVIVG01009342001 Vitis vinifera HOM05D007769 ORTHO05D009588 4.8e-06 54.3 78 46.2


User provided reference genes

Program Settings