Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02240 Eucalyptus grandis HOM05D002412 ORTHO05D002516 2.6e-86 322.0 164 100.0
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 2.0e-09 66.6 167 35.3
Cc00_g17020 Coffea canephora HOM05D002412 ORTHO05D002516 2.6e-09 66.2 128 40.6
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 5.8e-09 65.1 181 34.8
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 1.7e-08 63.5 167 34.7
COL.COLO4_28483 Corchorus olitorius HOM05D002412 ORTHO05D002516 2.9e-08 62.8 126 39.7
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 6.4e-08 61.6 127 39.4
Nitab4.5_0003953g0040 Nicotiana tabacum HOM05D002412 ORTHO05D002516 6.4e-08 61.6 193 34.7
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 8.4e-08 61.2 193 37.8
Thecc.08G086800 Theobroma cacao HOM05D002412 ORTHO05D002516 8.4e-08 61.2 183 35.5
QL12p038263 Quercus lobata HOM05D002412 ORTHO05D002516 1.1e-07 60.8 179 36.3
Gohir.A05G210800 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.4e-07 60.5 174 35.6
Lalb_Chr06g0165021 Lupinus albus HOM05D002412 ORTHO05D002516 1.4e-07 60.5 137 37.2
Lj5g0023078 Lotus japonicus HOM05D002412 ORTHO05D002516 2.4e-07 59.7 146 37.7
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.2e-07 59.3 176 35.2
CSS0002290 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 4.2e-07 58.9 131 40.5
QL93p0154_0003 Quercus lobata HOM05D002412 ORTHO05D002516 4.2e-07 58.9 124 39.5
Rhsim06G0063100 Rhododendron simsii HOM05D002412 ORTHO05D002516 4.2e-07 58.9 180 35.6
TAR376G0005 Trochodendron aralioides HOM05D002412 ORTHO05D002516 4.2e-07 58.9 148 36.5
Sabra09G0066300 Salix brachista HOM05D002412 ORTHO05D002516 7.1e-07 58.2 160 33.8
Cfa004671 Carpinus fangiana HOM05D002412 ORTHO05D002516 1.2e-06 57.4 144 33.3
Duzib041G0516 Durio zibethinus HOM05D002412 ORTHO05D002516 1.6e-06 57.0 163 35.6
Potri.014G015000 Populus trichocarpa HOM05D002412 ORTHO05D002516 1.6e-06 57.0 184 35.3
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 1.6e-06 57.0 141 34.0
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 2.1e-06 56.6 169 37.3
Nitab4.5_0003725g0030 Nicotiana tabacum HOM05D002412 ORTHO05D002516 2.7e-06 56.2 160 35.0
Oeu036975.1 Olea europaea HOM05D002412 ORTHO05D002516 2.7e-06 56.2 179 34.1
Dinv42242 Davidia involucrata HOM05D002412 ORTHO05D002516 3.5e-06 55.8 145 37.2
Duzib093G1945 Durio zibethinus HOM05D002412 ORTHO05D002516 3.5e-06 55.8 134 36.6
Nitab4.5_0000497g0080 Nicotiana tabacum HOM05D002412 ORTHO05D002516 3.5e-06 55.8 174 35.1
Oeu020549.2 Olea europaea HOM05D002412 ORTHO05D002516 3.5e-06 55.8 139 34.5
Oeu037285.1 Olea europaea HOM05D002412 ORTHO05D002516 3.5e-06 55.8 129 34.9
Psat6g017720 Pisum sativum HOM05D002412 ORTHO05D002516 3.5e-06 55.8 132 40.2
Lalb_Chr02g0144931 Lupinus albus HOM05D002412 ORTHO05D002516 4.6e-06 55.5 129 40.3
VMungo0720G0862 Vigna mungo HOM05D002412 ORTHO05D002516 4.6e-06 55.5 140 37.1
Cc10_g05040 Coffea canephora HOM05D002412 ORTHO05D002516 6.0e-06 55.1 128 36.7
Peaxi162Scf00081g00269 Petunia axillaris HOM05D002412 ORTHO05D002516 6.0e-06 55.1 173 35.8
Potri.009G086600 Populus trichocarpa HOM05D002412 ORTHO05D002516 6.0e-06 55.1 163 32.5


User provided reference genes

Program Settings