Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 3.0e-114 415.2 218 100.0
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 4.9e-80 301.6 218 69.3
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 1.1e-79 300.4 219 72.1
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 7.1e-79 297.7 219 70.3
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 6.0e-78 294.7 216 70.4
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.3e-77 293.5 219 70.3
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 6.6e-77 291.2 218 67.9
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 1.1e-76 290.4 216 70.4
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 1.5e-76 290.0 226 69.0
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 1.9e-76 289.7 219 69.4
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 5.6e-76 288.1 218 68.8
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 7.3e-76 287.7 222 67.6
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 3.6e-75 285.4 206 69.4
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 4.7e-75 285.0 218 68.8
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 4.7e-75 285.0 216 69.0
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 2.4e-74 282.7 218 66.1
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 2.4e-74 282.7 218 67.0
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 2.4e-74 282.7 219 68.9
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 4.0e-74 282.0 218 65.6
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 4.0e-74 282.0 218 65.6
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 6.9e-74 281.2 216 67.6
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 6.9e-74 281.2 216 69.4
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 6.9e-74 281.2 218 67.0
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 8.9e-74 280.8 218 69.7
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 8.9e-74 280.8 217 67.7
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 1.2e-73 280.4 217 67.7
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 2.6e-73 279.3 194 73.7
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 3.4e-73 278.9 218 67.0
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 4.4e-73 278.5 218 65.1
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 5.8e-73 278.1 226 65.5
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 7.6e-73 277.7 218 65.1
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 9.9e-73 277.3 218 66.1
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 9.9e-73 277.3 243 64.2
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 1.3e-72 276.9 216 66.7
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 1.7e-72 276.6 197 68.5
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 2.2e-72 276.2 218 65.1
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 2.9e-72 275.8 204 68.1
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 2.9e-72 275.8 218 65.1
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 6.4e-72 274.6 217 66.4
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 6.4e-72 274.6 222 66.2
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 8.4e-72 274.2 215 65.6
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 8.4e-72 274.2 216 66.7
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 1.1e-71 273.9 215 65.1
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 1.1e-71 273.9 222 65.8
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 1.1e-71 273.9 218 65.1
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 1.4e-71 273.5 218 65.1
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 1.9e-71 273.1 218 66.5
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 3.2e-71 272.3 218 64.7
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 7.1e-71 271.2 204 67.2
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 1.2e-70 270.4 222 66.2
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 1.6e-70 270.0 222 66.2
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 1.6e-70 270.0 215 65.6
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 2.1e-70 269.6 218 64.2
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 2.1e-70 269.6 246 62.2
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 2.7e-70 269.2 207 68.1
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 3.5e-70 268.9 204 66.2
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 5.1e-69 265.0 213 65.3
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 1.1e-68 263.8 220 64.1
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 1.9e-68 263.1 217 64.1
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 1.9e-68 263.1 221 62.9
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 1.9e-68 263.1 232 61.6
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 9.6e-68 260.8 223 61.4
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 1.3e-67 260.4 216 60.6
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 2.1e-67 259.6 216 65.3
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 2.1e-67 259.6 220 63.2
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 6.2e-67 258.1 219 62.1
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 8.1e-67 257.7 218 62.4
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 8.1e-67 257.7 217 62.7
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 3.1e-66 255.8 214 63.6
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 5.3e-66 255.0 222 63.5
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 6.9e-66 254.6 220 64.1
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 7.6e-65 251.1 220 63.2
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 3.8e-64 248.8 183 68.9
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 8.4e-64 247.7 218 62.4
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 1.9e-63 246.5 167 73.7
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 2.4e-63 246.1 167 71.9
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 1.8e-61 240.0 179 67.6
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 3.9e-61 238.8 167 72.5
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 2.5e-60 236.1 167 71.3
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 2.8e-59 232.6 171 68.4
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 1.4e-58 230.3 153 75.8
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 5.8e-57 224.9 193 59.6
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 4.2e-55 218.8 228 53.9
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 2.7e-54 216.1 217 56.2
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 6.7e-53 211.5 219 51.6
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 3.3e-52 209.1 156 73.1
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 3.7e-51 205.7 138 71.0
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 7.9e-46 188.0 141 63.8
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 8.7e-45 184.5 155 69.0
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 5.7e-44 181.8 218 50.0
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 4.1e-42 175.6 136 64.0
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 1.1e-39 167.5 147 65.3
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 1.4e-39 167.2 147 64.6
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 2.0e-25 120.2 80 81.2
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 2.0e-25 120.2 80 81.2
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 3.4e-25 119.4 95 69.5
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 4.4e-20 102.4 214 35.5
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 2.2e-19 100.1 73 58.9
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 4.8e-19 99.0 66 77.3
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 7.7e-17 91.7 160 40.0
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 8.5e-16 88.2 59 71.2
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 4.7e-14 82.4 184 38.0
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 2.3e-13 80.1 78 56.4
CDE04G2918 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 5.5e-07 58.9 43 60.5


User provided reference genes

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