Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 9.8e-124 446.8 226 100.0
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 2.1e-54 216.5 207 54.6
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 1.4e-53 213.8 207 54.1
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 5.3e-53 211.8 217 53.0
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 1.1e-50 204.1 216 51.4
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 9.3e-50 201.1 222 50.0
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 7.9e-49 198.0 207 49.3
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 1.8e-48 196.8 191 55.0
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 2.3e-48 196.4 163 59.5
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 5.1e-48 195.3 205 52.7
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 7.4e-47 191.4 223 46.6
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 3.1e-45 186.0 218 45.9
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 5.3e-45 185.3 218 47.7
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 9.0e-45 184.5 216 47.2
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 3.4e-44 182.6 212 46.2
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 7.7e-44 181.4 213 48.8
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 1.9e-42 176.8 181 48.6
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 2.5e-42 176.4 221 45.7
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 1.2e-41 174.1 206 47.6
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 2.1e-41 173.3 216 46.8
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 4.6e-41 172.2 212 42.9
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 6.1e-41 171.8 218 44.5
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 6.1e-41 171.8 210 47.6
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 6.1e-41 171.8 216 44.9
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 1.0e-40 171.0 213 43.7
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 1.4e-40 170.6 217 43.3
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 1.4e-40 170.6 218 42.2
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 1.8e-40 170.2 218 41.7
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 3.0e-40 169.5 218 44.0
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 3.9e-40 169.1 159 52.8
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 5.1e-40 168.7 202 46.5
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 2.5e-39 166.4 213 44.1
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 2.5e-39 166.4 178 47.8
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 3.3e-39 166.0 174 47.1
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 5.7e-39 165.2 209 45.5
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 7.4e-39 164.9 228 41.7
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.3e-38 164.1 209 45.5
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 1.3e-38 164.1 179 48.6
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 1.4e-37 160.6 224 44.6
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.4e-37 159.8 181 47.5
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 4.1e-37 159.1 173 49.1
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 5.3e-37 158.7 181 47.0
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 9.1e-37 157.9 181 47.0
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 9.1e-37 157.9 179 48.0
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 9.1e-37 157.9 234 41.0
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 3.4e-36 156.0 220 40.9
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 4.5e-36 155.6 170 48.2
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 7.7e-36 154.8 210 40.5
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.7e-35 153.7 220 36.8
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 1.7e-35 153.7 154 52.6
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.2e-35 153.3 217 43.3
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 1.1e-34 151.0 166 46.4
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 1.4e-34 150.6 199 42.2
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 2.5e-34 149.8 150 48.0
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 2.7e-33 146.4 159 47.8
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 6.1e-33 145.2 166 44.6
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 1.0e-32 144.4 162 45.1
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 2.3e-32 143.3 206 40.8
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.9e-32 142.5 181 44.2
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 2.6e-31 139.8 158 43.0
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 3.7e-30 136.0 170 44.1
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 9.1e-29 131.3 176 42.6
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 2.0e-28 130.2 157 45.9
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 8.5e-27 124.8 112 53.6
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 1.1e-26 124.4 162 43.2
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 2.1e-25 120.2 142 46.5
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 1.8e-24 117.1 160 42.5
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 3.8e-19 99.4 173 35.3
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 5.5e-18 95.5 89 44.9
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 6.1e-17 92.0 181 32.0
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 3.0e-16 89.7 232 28.0
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 6.8e-16 88.6 190 34.2
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 1.2e-15 87.8 104 41.3
AagrBONN_evm.TU.Sc2ySwM_344.1640 Anthoceros agrestis HOM05D007054 ORTHO05D008888 7.5e-15 85.1 136 35.3
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 2.8e-14 83.2 175 30.9
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 2.8e-14 83.2 175 30.9
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 2.8e-14 83.2 115 37.4
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 3.7e-14 82.8 178 30.3
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 8.3e-14 81.6 206 30.6
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 8.3e-14 81.6 165 30.9
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 8.3e-14 81.6 218 28.9
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 1.1e-13 81.3 135 34.1
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 2.4e-13 80.1 160 31.9
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 4.1e-13 79.3 175 29.7
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 5.4e-13 79.0 194 28.9
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 5.4e-13 79.0 143 32.9
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 7.0e-13 78.6 163 28.8
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 2.7e-12 76.6 165 30.3
Psat6g096080 Pisum sativum HOM05D007054 ORTHO05D008888 2.7e-12 76.6 170 28.8
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 7.7e-12 75.1 143 30.1
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 7.7e-12 75.1 166 31.3
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 1.0e-11 74.7 166 28.3
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 1.3e-11 74.3 186 28.0
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 1.3e-11 74.3 152 29.6
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 1.7e-11 73.9 193 27.5
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 1.7e-11 73.9 165 30.3
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 2.2e-11 73.6 147 31.3
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 2.2e-11 73.6 173 30.6
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 2.9e-11 73.2 161 30.4
TPR.G11147 Trifolium pratense HOM05D007054 ORTHO05D008888 3.8e-11 72.8 174 27.0
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 5.0e-11 72.4 135 31.9
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 6.5e-11 72.0 137 29.9
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 8.5e-11 71.6 147 30.6
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 8.5e-11 71.6 161 27.3
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 1.1e-10 71.2 174 27.6
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 1.5e-10 70.9 201 27.9
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 1.5e-10 70.9 174 25.3
Medtr1g034050 Medicago truncatula HOM05D007054 ORTHO05D008888 1.5e-10 70.9 169 27.2
MD15G1063400 Malus domestica HOM05D008077 ORTHO05D010221 1.9e-10 70.5 81 46.9
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 1.9e-10 70.5 147 29.9
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 2.5e-10 70.1 162 27.8
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 4.2e-10 69.3 141 29.1
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 4.2e-10 69.3 193 25.9
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 4.2e-10 69.3 140 30.0
THA.LOC104798802 Tarenaya hassleriana HOM05D007054 ORTHO05D008888 4.2e-10 69.3 191 27.7
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 5.5e-10 68.9 140 29.3
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 7.2e-10 68.6 190 26.8
arahy.Tifrunner.gnm1.ann1.LAP5IF Arachis hypogaea HOM05D007054 ORTHO05D008888 9.4e-10 68.2 153 26.8
AT1G49510 Arabidopsis thaliana HOM05D007054 ORTHO05D008888 1.2e-09 67.8 218 24.3
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 1.6e-09 67.4 184 25.0
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 1.6e-09 67.4 163 27.0
CDE02G0602 Ceratophyllum demersum HOM05D007054 ORTHO05D008888 2.1e-09 67.0 138 30.4
AL1G56860 Arabidopsis lyrata HOM05D007054 ORTHO05D008888 2.7e-09 66.6 158 25.9
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 2.7e-09 66.6 188 24.5
Lalb_Chr01g0013331 Lupinus albus HOM05D007054 ORTHO05D008888 2.7e-09 66.6 147 29.9
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 8.0e-09 65.1 182 26.4
SalBow3G3466 Salvia bowleyana HOM05D007054 ORTHO05D008888 1.4e-08 64.3 171 28.7
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 1.4e-08 64.3 137 27.7
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 2.3e-08 63.5 183 24.0
Thhalv10011746m.g Eutrema salsugineum HOM05D007054 ORTHO05D008888 2.3e-08 63.5 167 26.9
TAR381G0282 Trochodendron aralioides HOM05D007054 ORTHO05D008888 2.3e-08 63.5 180 26.7
Aa31LG8G5880 Aethionema arabicum HOM05D007054 ORTHO05D008888 3.0e-08 63.2 154 27.9
Sp1g36370 Schrenkiella parvula HOM05D007054 ORTHO05D008888 3.0e-08 63.2 184 25.0
AUR62003054 Chenopodium quinoa HOM05D007054 ORTHO05D008888 6.8e-08 62.0 176 26.7
AUR62007867 Chenopodium quinoa HOM05D007054 ORTHO05D008888 1.2e-07 61.2 142 26.1
BcaB02g11085 Brassica carinata HOM05D007054 ORTHO05D008888 1.5e-07 60.8 193 25.9
ECA234G0688 Erigeron canadensis HOM05D007054 ORTHO05D008888 1.5e-07 60.8 214 23.4
SGA_v2.0_scaffold9G04688 Striga asiatica HOM05D007054 ORTHO05D008888 2.6e-07 60.1 134 28.4
BcaC05g27487 Brassica carinata HOM05D007054 ORTHO05D008888 3.4e-07 59.7 167 26.3
C05p34530 Brassica napus HOM05D007054 ORTHO05D008888 3.4e-07 59.7 167 26.3
Lsat_1_v5_gn_5_117740 Lactuca sativa HOM05D007054 ORTHO05D008888 2.2e-06 57.0 149 26.8
DCAR_022067 Daucus carota HOM05D007054 ORTHO05D008888 2.8e-06 56.6 119 28.6
FAN27G0716 Fragaria x ananassa HOM05D007054 ORTHO05D008888 3.7e-06 56.2 134 26.9


User provided reference genes

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