Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 5.3e-103 379.4 258 100.0
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 3.2e-44 184.1 180 57.8
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 3.0e-42 177.6 224 59.4
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 6.8e-42 176.4 180 56.1
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 6.8e-42 176.4 184 56.0
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 2.4e-39 167.9 181 52.5
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 7.0e-39 166.4 258 62.4
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 1.2e-38 165.6 182 52.7
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 1.6e-38 165.2 260 63.5
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 2.0e-38 164.9 183 51.4
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 5.9e-38 163.3 192 52.1
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 8.6e-37 159.5 228 58.3
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.2e-35 155.6 173 52.0
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 1.0e-34 152.5 223 57.0
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 2.3e-34 151.4 174 51.7
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 5.2e-34 150.2 258 62.0
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 1.5e-33 148.7 170 48.8
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 1.5e-33 148.7 170 52.4
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.5e-33 148.7 170 52.4
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 1.5e-33 148.7 173 49.1
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 4.9e-32 143.7 170 51.2
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 8.3e-32 142.9 230 52.6
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 1.4e-31 142.1 180 47.2
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.2e-30 139.0 178 50.6
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 1.6e-30 138.7 172 48.8
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 3.5e-30 137.5 179 47.5
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 5.9e-30 136.7 173 49.7
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 2.9e-29 134.4 222 52.7
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 1.5e-28 132.1 262 59.2
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 4.3e-28 130.6 261 55.9
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.2e-27 129.0 170 47.1
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 1.2e-27 129.0 169 50.3
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 1.6e-27 128.6 173 46.8
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 4.7e-27 127.1 165 47.9
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 1.4e-26 125.6 262 57.3
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 3.1e-26 124.4 260 57.3
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 3.1e-26 124.4 184 43.5
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 4.0e-26 124.0 166 44.6
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 6.8e-26 123.2 171 46.2
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 1.5e-25 122.1 169 46.2
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 2.0e-25 121.7 226 51.8
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 3.4e-25 120.9 173 43.4
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 7.5e-25 119.8 174 43.1
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 7.5e-25 119.8 173 46.2
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 7.5e-25 119.8 229 51.1
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 2.9e-24 117.9 163 46.6
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 3.7e-24 117.5 169 44.4
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 4.9e-24 117.1 173 42.8
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 8.3e-24 116.3 173 42.8
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 8.3e-24 116.3 172 43.6
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 8.3e-24 116.3 176 45.5
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 8.3e-24 116.3 232 48.3
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.4e-23 114.8 162 43.8
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 3.2e-23 114.4 159 78.0
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 4.1e-23 114.0 175 42.9
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 5.4e-23 113.6 99 58.6
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 9.2e-23 112.8 164 45.7
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 1.6e-22 112.1 171 40.9
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.6e-22 112.1 177 41.8
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.6e-22 112.1 177 41.8
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.0e-22 111.7 157 46.5
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 2.0e-22 111.7 170 44.7
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 8.6e-21 106.3 259 54.4
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 1.1e-20 105.9 174 39.7
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 1.9e-20 105.1 159 74.2
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 1.2e-19 102.4 258 55.0
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 1.6e-19 102.1 222 48.2
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 2.1e-19 101.7 170 40.6
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.8e-19 101.3 109 52.3
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 3.6e-19 100.9 222 47.7
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 6.2e-19 100.1 172 68.6
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 6.2e-19 100.1 181 39.8
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 6.2e-19 100.1 182 40.1
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 8.1e-19 99.8 162 42.0
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 1.1e-18 99.4 170 40.0
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 1.1e-18 99.4 77 62.3
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 1.4e-18 99.0 174 38.5
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.4e-18 99.0 172 41.3
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 1.8e-18 98.6 183 42.1
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 2.3e-18 98.2 150 78.0
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 4.0e-18 97.4 146 57.5
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 6.8e-18 96.7 179 36.3
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 6.8e-18 96.7 170 41.8
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 8.9e-18 96.3 91 56.0
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 1.2e-17 95.9 170 40.0
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 2.6e-17 94.7 150 59.3
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 2.6e-17 94.7 107 45.8
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 3.4e-17 94.4 167 39.5
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 5.8e-17 93.6 60 70.0
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 9.8e-17 92.8 105 48.6
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 2.9e-16 91.3 170 38.8
Cpa.g.sc177.11 Carica papaya HOM05D006739 ORTHO05D008402 3.7e-16 90.9 136 44.1
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.4e-15 89.0 99 51.5
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 3.2e-15 87.8 150 57.3
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.1e-15 87.4 167 40.1
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 7.1e-15 86.7 133 42.9
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 7.1e-15 86.7 133 42.9
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 1.2e-14 85.9 99 49.5
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 4.6e-14 84.0 167 37.1
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 8.6e-13 79.7 43 83.7
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.9e-12 78.6 70 55.7
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 2.8e-11 74.7 113 42.5
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 3.6e-11 74.3 99 44.4
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.7e-11 73.9 92 48.9
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 3.1e-10 71.2 107 43.0
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 5.2e-10 70.5 121 40.5
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 2.6e-09 68.2 72 48.6
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 3.4e-09 67.8 46 67.4
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 4.4e-09 67.4 73 71.2
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 2.9e-08 64.7 73 68.5
Actinidia19612 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.4e-07 61.6 73 69.9
Glyma.14G184300 Glycine max HOM05D006739 ORTHO05D008402 3.2e-07 61.2 158 31.0
Dinv22007 Davidia involucrata HOM05D006739 ORTHO05D008402 9.2e-07 59.7 30 80.0
MBI16_g14339_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 2.7e-06 58.2 109 75.2


User provided reference genes

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