Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 1.6e-289 998.8 557 100.0
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 4.5e-29 133.7 113 54.9
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 1.3e-28 132.1 160 46.9
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 3.8e-28 130.6 533 28.0
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 6.5e-28 129.8 116 51.7
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 4.2e-27 127.1 343 33.8
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 1.2e-26 125.6 111 55.0
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 1.6e-26 125.2 133 45.9
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 2.1e-26 124.8 542 27.5
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 1.4e-25 122.1 147 47.6
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 6.7e-25 119.8 122 49.2
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 8.8e-25 119.4 150 43.3
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 8.8e-25 119.4 541 27.7
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 1.2e-24 119.0 123 47.2
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 3.3e-24 117.5 258 32.6
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 3.3e-24 117.5 176 35.8
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 3.3e-24 117.5 176 35.8
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 5.7e-24 116.7 190 35.3
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 7.5e-24 116.3 191 38.7
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 9.7e-24 115.9 134 45.5
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 1.3e-23 115.5 116 50.9
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 1.7e-23 115.2 132 45.5
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 2.2e-23 114.8 129 46.5
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 6.3e-23 113.2 127 44.1
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 6.3e-23 113.2 318 29.9
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 1.8e-22 111.7 148 42.6
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 9.1e-22 109.4 130 41.5
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 1.6e-21 108.6 125 51.2
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 3.5e-21 107.5 119 49.6
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 3.5e-21 107.5 119 49.6
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 3.5e-21 107.5 158 39.2
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 4.5e-21 107.1 130 43.8
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 7.7e-21 106.3 120 44.2
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 1.0e-20 105.9 159 39.0
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 1.7e-20 105.1 119 47.9
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 5.0e-20 103.6 119 44.5
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 5.5e-19 100.1 131 42.0
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 2.1e-18 98.2 152 38.8
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 6.1e-18 96.7 204 30.9
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 6.1e-18 96.7 119 39.5
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 8.0e-18 96.3 142 37.3
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 1.0e-17 95.9 174 32.8
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 5.2e-17 93.6 204 34.8
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 8.8e-17 92.8 80 53.8
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 2.0e-16 91.7 118 44.1
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 2.6e-16 91.3 159 35.2
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 3.4e-16 90.9 247 28.7
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 4.4e-16 90.5 128 41.4
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 9.8e-16 89.4 145 35.2
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 1.3e-15 89.0 117 39.3
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 2.2e-15 88.2 113 40.7
Potri.005G156500 Populus trichocarpa HOM05D008012 ORTHO05D010154 3.7e-15 87.4 128 38.3
Sabra05G0120100 Salix brachista HOM05D008012 ORTHO05D010154 4.8e-15 87.0 125 39.2
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 6.3e-15 86.7 95 42.1
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 1.8e-14 85.1 100 42.0
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 3.1e-14 84.3 80 51.2
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 3.1e-14 84.3 170 32.9
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 5.4e-14 83.6 154 33.1
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 7.0e-14 83.2 151 37.7
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 1.6e-13 82.0 91 41.8
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 2.7e-13 81.3 73 60.3
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 3.5e-13 80.9 539 24.7
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 6.5e-12 76.6 147 31.3
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 4.2e-11 73.9 527 25.0
HPP92_005977 Vanilla planifolia HOM05D061362 ORTHO05D010154 8.0e-10 69.7 71 42.3
Os08g0477800 Oryza sativa ssp. japonica HOM05D008012 ORTHO05D010154 1.4e-09 68.9 148 32.4
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 1.4e-09 68.9 103 36.9
Sopen07g015000 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-09 66.2 50 58.0
arahy.Tifrunner.gnm1.ann1.XWH5X4 Arachis hypogaea HOM05D008012 ORTHO05D010154 5.4e-06 57.0 126 34.1
CSS0023045 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 9.2e-06 56.2 79 44.3


User provided reference genes

Program Settings