Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 5.7e-127 457.6 232 100.0
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 7.7e-100 367.5 232 80.6
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 6.6e-75 284.6 235 65.1
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 1.1e-72 277.3 234 62.8
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 2.6e-71 272.7 232 61.6
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 4.4e-71 271.9 230 64.3
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 1.3e-70 270.4 233 60.5
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 2.2e-70 269.6 232 62.1
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 3.7e-70 268.9 230 63.0
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 8.3e-70 267.7 230 63.5
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 2.1e-68 263.1 233 57.5
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 5.1e-67 258.5 236 60.6
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 1.9e-66 256.5 235 61.7
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 7.3e-66 254.6 232 57.8
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 9.5e-66 254.2 233 58.8
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 1.6e-65 253.4 232 60.8
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 2.1e-65 253.1 237 59.1
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 4.7e-65 251.9 228 57.0
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 1.1e-64 250.8 189 68.3
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 2.4e-64 249.6 230 58.3
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 5.2e-64 248.4 236 58.5
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 5.2e-64 248.4 234 54.7
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 6.8e-64 248.1 233 57.9
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 6.8e-64 248.1 233 58.4
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 8.9e-64 247.7 234 56.4
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 8.9e-64 247.7 233 57.9
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 1.2e-63 247.3 230 58.3
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 3.4e-63 245.7 229 57.6
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 4.4e-63 245.4 226 56.6
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 9.9e-63 244.2 232 56.0
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 9.9e-63 244.2 234 55.1
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 1.7e-62 243.4 224 55.8
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 1.7e-62 243.4 192 63.0
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.7e-62 243.4 230 55.7
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 2.9e-62 242.7 231 56.3
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 3.8e-62 242.3 233 55.8
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 4.9e-62 241.9 226 56.6
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 4.9e-62 241.9 227 56.8
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 4.9e-62 241.9 227 55.5
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 6.4e-62 241.5 229 57.2
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 8.4e-62 241.1 228 57.0
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 8.4e-62 241.1 229 57.2
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 8.4e-62 241.1 229 57.2
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.1e-61 240.7 233 53.6
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 1.4e-61 240.4 233 55.8
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 1.9e-61 240.0 234 57.3
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.9e-61 240.0 229 56.8
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 2.4e-61 239.6 233 53.6
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 4.1e-61 238.8 213 57.3
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 7.1e-61 238.0 206 58.3
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 1.2e-60 237.3 233 55.8
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 1.6e-60 236.9 226 55.3
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 2.7e-60 236.1 229 56.3
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 4.6e-60 235.3 234 55.6
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 6.0e-60 235.0 231 54.1
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 7.8e-60 234.6 206 56.8
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 1.7e-59 233.4 233 55.8
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 2.3e-59 233.0 226 54.9
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 3.0e-59 232.6 231 53.2
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 4.3e-58 228.8 226 50.0
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 5.6e-58 228.4 222 55.4
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 7.3e-58 228.0 193 63.7
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 7.3e-58 228.0 230 53.5
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 7.3e-58 228.0 217 51.6
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 1.2e-57 227.3 192 60.4
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 3.6e-57 225.7 203 61.1
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 4.7e-57 225.3 253 53.4
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 8.1e-57 224.6 227 51.1
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 1.1e-56 224.2 235 50.2
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 1.1e-56 224.2 226 52.7
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.4e-56 223.0 245 52.7
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 3.1e-56 222.6 245 52.7
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 6.9e-56 221.5 226 49.6
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 9.0e-56 221.1 245 52.2
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 1.2e-55 220.7 246 50.4
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 2.0e-55 219.9 235 52.3
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 4.4e-55 218.8 235 50.6
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 7.6e-55 218.0 235 51.1
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 7.6e-55 218.0 193 53.4
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 7.6e-55 218.0 199 60.8
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 1.7e-54 216.9 188 54.3
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 2.2e-54 216.5 235 50.6
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 2.9e-54 216.1 193 52.8
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 2.9e-54 216.1 193 52.8
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 3.8e-54 215.7 194 53.1
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 3.8e-54 215.7 188 55.9
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 3.8e-54 215.7 244 52.0
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 8.4e-54 214.5 188 53.7
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 1.4e-53 213.8 229 52.8
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 1.9e-53 213.4 226 49.6
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 1.9e-53 213.4 188 53.2
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 2.4e-53 213.0 233 48.9
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 4.2e-53 212.2 222 50.5
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 9.3e-53 211.1 233 48.9
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 1.2e-52 210.7 247 47.0
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 1.6e-52 210.3 194 51.0
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.7e-52 209.5 263 47.9
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 7.8e-52 208.0 194 50.5
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 7.8e-52 208.0 233 48.1
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 1.3e-51 207.2 232 49.6
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 1.7e-51 206.8 193 54.4
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 1.7e-51 206.8 233 47.6
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 2.3e-51 206.5 194 50.0
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 3.9e-51 205.7 194 50.5
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 3.9e-51 205.7 195 51.8
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 6.6e-51 204.9 231 50.6
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 1.9e-50 203.4 227 51.1
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.6e-49 200.3 187 56.7
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 2.1e-49 199.9 235 49.8
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 8.1e-49 198.0 226 47.3
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 1.1e-48 197.6 182 50.5
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 1.8e-48 196.8 230 49.1
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 2.4e-48 196.4 260 45.0
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 4.0e-48 195.7 228 48.7
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 4.9e-46 188.7 184 54.9
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.4e-45 187.2 184 53.8
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 8.7e-43 177.9 161 55.9
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 3.7e-41 172.6 157 52.2
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 1.1e-40 171.0 196 47.4
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 9.0e-40 167.9 142 58.5
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 6.4e-38 161.8 123 64.2
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 8.4e-38 161.4 233 42.1
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 1.4e-37 160.6 234 41.5
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 1.9e-37 160.2 224 46.0
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 4.6e-36 155.6 311 36.3
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 1.1e-32 144.4 205 41.0
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 7.6e-31 138.3 253 37.2
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 1.2e-28 131.0 152 46.7
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 2.1e-28 130.2 131 51.9
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 1.3e-27 127.5 201 38.8
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 2.4e-24 116.7 183 37.7
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 6.9e-24 115.2 184 37.5
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 2.0e-23 113.6 179 38.0
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 3.4e-23 112.8 216 35.2
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 1.4e-19 100.9 116 46.6
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 3.3e-18 96.3 151 40.4
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 2.2e-17 93.6 76 64.5
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 2.1e-12 77.0 88 47.7
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 1.4e-11 74.3 99 40.4
BolC6t40000H Brassica oleracea HOM05D004951 ORTHO05D005840 1.5e-10 70.9 70 45.7
FAN27G0705 Fragaria x ananassa HOM05D004951 ORTHO05D005840 5.9e-07 58.9 100 37.0
GSVIVG01010657001 Vitis vinifera HOM05D002399 ORTHO05D005840 7.7e-07 58.5 54 59.3


User provided reference genes

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