Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 0.0e+00 1401.0 793 100.0
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 3.1e-132 476.9 838 43.7
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 3.8e-130 469.9 842 44.7
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 1.5e-126 458.0 861 41.3
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 2.5e-126 457.2 858 41.8
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 2.5e-126 457.2 840 44.3
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 1.3e-122 444.9 830 43.0
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 3.5e-120 436.8 848 41.9
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 1.0e-119 435.3 821 42.6
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 3.0e-119 433.7 823 41.9
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 7.4e-118 429.1 801 42.8
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 9.7e-118 428.7 841 43.5
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.4e-116 424.9 861 41.8
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 2.4e-116 424.1 881 40.2
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 3.1e-116 423.7 861 41.8
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 5.3e-116 422.9 873 40.4
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 2.6e-115 420.6 789 41.8
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 3.4e-115 420.2 809 43.9
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 1.0e-114 418.7 810 42.8
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 7.2e-113 412.5 813 42.6
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 4.6e-112 409.8 817 41.7
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 3.9e-111 406.8 823 41.4
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.1e-110 405.2 811 40.8
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.1e-110 405.2 813 40.5
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 2.0e-110 404.4 819 41.3
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 2.5e-110 404.1 858 41.0
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 4.3e-110 403.3 819 40.9
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 3.7e-109 400.2 811 40.7
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 1.8e-108 397.9 826 40.8
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 2.7e-104 384.0 840 39.4
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 6.7e-103 379.4 823 42.2
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 2.2e-101 374.4 837 39.2
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 3.7e-101 373.6 866 38.8
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 3.7e-101 373.6 821 39.6
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 1.4e-100 371.7 863 38.0
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 1.5e-97 361.7 847 38.7
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 3.2e-97 360.5 857 38.9
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 7.2e-97 359.4 783 39.0
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 9.4e-97 359.0 859 38.4
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 4.7e-96 356.7 893 37.3
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 3.0e-95 354.0 854 37.1
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 8.8e-95 352.4 826 38.7
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 1.5e-94 351.7 836 39.0
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 2.0e-94 351.3 843 38.2
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 3.3e-94 350.5 845 36.9
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 4.4e-94 350.1 766 42.2
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 7.5e-94 349.4 827 37.1
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 1.3e-93 348.6 850 38.1
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 4.1e-92 343.6 808 35.3
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 5.3e-92 343.2 853 37.2
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 7.0e-92 342.8 813 39.1
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 9.1e-92 342.4 860 37.3
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 9.1e-92 342.4 838 39.9
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 1.6e-91 341.7 806 39.2
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 1.0e-90 339.0 841 36.3
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 2.9e-90 337.4 845 36.3
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 2.9e-90 337.4 813 39.6
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 3.8e-90 337.0 842 36.8
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 8.5e-90 335.9 825 36.8
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 1.9e-89 334.7 832 36.7
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 5.5e-89 333.2 825 36.5
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 2.1e-88 331.3 856 36.4
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 1.4e-87 328.6 822 37.8
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 3.0e-87 327.4 792 37.9
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 9.8e-86 322.4 854 36.7
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 1.3e-85 322.0 835 36.4
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 8.3e-85 319.3 937 35.0
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 1.4e-84 318.5 837 37.0
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 1.4e-84 318.5 872 35.4
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 1.4e-84 318.5 800 36.4
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 2.4e-84 317.8 836 37.3
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 2.4e-84 317.8 806 37.2
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 4.1e-84 317.0 817 38.6
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 7.0e-84 316.2 830 37.0
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 3.5e-83 313.9 857 37.1
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 5.9e-83 313.2 803 35.0
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 5.9e-83 313.2 806 37.5
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 5.5e-81 306.6 823 35.7
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 9.4e-81 305.8 823 35.7
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 8.0e-80 302.8 899 35.5
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 2.3e-79 301.2 846 35.7
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 2.3e-79 301.2 781 35.9
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 4.0e-79 300.4 831 34.5
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 4.0e-79 300.4 743 37.0
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 9.8e-78 295.8 827 34.8
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 1.3e-77 295.4 821 33.0
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 2.2e-77 294.7 828 33.1
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 2.2e-77 294.7 821 33.6
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 3.7e-77 293.9 834 33.8
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 6.3e-77 293.1 819 34.2
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 6.3e-77 293.1 819 34.2
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 2.7e-75 287.7 708 38.7
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 1.9e-73 281.6 830 32.8
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 3.3e-73 280.8 775 34.1
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 2.8e-72 277.7 602 41.4
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 3.6e-72 277.3 867 35.6
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 3.0e-71 274.2 796 34.9
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 4.7e-64 250.4 799 34.4
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 1.0e-63 249.2 825 33.2
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 9.2e-60 236.1 807 32.1
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 7.8e-59 233.0 816 34.9
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 1.7e-58 231.9 786 33.6
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 1.5e-57 228.8 737 34.6
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 6.2e-56 223.4 960 29.7
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 1.1e-55 222.6 826 31.7
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 1.2e-54 219.2 154 75.3
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 3.4e-54 217.6 787 32.9
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 2.7e-51 208.0 775 30.5
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 2.7e-51 208.0 806 30.0
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 4.7e-48 197.2 795 31.3
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 2.2e-45 188.3 154 65.6
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 1.5e-41 175.6 158 62.7
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 2.8e-40 171.4 180 57.8
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 5.6e-33 147.1 197 47.2
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 7.3e-33 146.7 438 33.1
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 2.2e-29 135.2 198 44.4
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 4.9e-29 134.0 303 36.6
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 6.4e-29 133.7 303 36.6
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 1.2e-27 129.4 158 50.0
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 4.8e-24 117.5 161 45.3
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 2.0e-22 112.1 97 67.0
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 1.9e-20 105.5 112 61.6
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 2.7e-19 101.7 73 69.9
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 1.4e-15 89.4 284 38.0
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 2.2e-13 82.0 188 33.0
Cc00_g23250 Coffea canephora HOM05D000874 ORTHO05D001049 1.1e-07 63.2 43 55.8
Lsat_1_v5_gn_6_88041 Lactuca sativa HOM05D005351 ORTHO05D006542 4.1e-07 61.2 86 40.7


User provided reference genes

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