Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.3e-191 672.9 346 100.0
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.6e-77 293.9 373 49.9
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.3e-74 284.3 354 48.9
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.3e-74 284.3 354 48.9
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 6.4e-74 282.0 377 46.7
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 1.6e-72 277.3 341 49.9
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 1.3e-71 274.2 340 48.8
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 1.7e-71 273.9 342 47.7
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 5.1e-71 272.3 347 48.7
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 6.6e-71 271.9 342 47.4
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 4.3e-70 269.2 348 45.7
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 5.6e-70 268.9 340 48.2
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 9.5e-70 268.1 339 47.5
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.2e-69 267.7 342 47.1
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.8e-69 266.5 345 47.2
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 3.6e-69 266.2 341 48.4
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 6.2e-69 265.4 345 47.0
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 1.1e-68 264.6 382 43.7
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 4.0e-68 262.7 345 46.7
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 1.2e-67 261.2 339 47.5
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 2.6e-67 260.0 343 45.8
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 3.4e-67 259.6 340 44.1
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 9.9e-67 258.1 360 45.8
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 6.4e-66 255.4 379 43.8
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.1e-65 254.6 359 45.4
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 5.4e-65 252.3 330 45.2
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 2.7e-64 250.0 348 45.7
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 3.5e-64 249.6 346 45.1
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 4.6e-64 249.2 379 42.7
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 1.9e-62 243.8 338 44.4
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 1.2e-61 241.1 215 57.2
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.1e-61 240.4 366 43.2
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 4.7e-61 239.2 334 44.0
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 8.1e-61 238.4 339 44.0
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 1.1e-60 238.0 315 47.0
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 2.4e-60 236.9 342 44.7
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 2.4e-60 236.9 349 42.7
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 9.9e-59 231.5 339 42.2
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 1.7e-58 230.7 328 42.1
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 2.2e-58 230.3 331 42.6
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 4.9e-58 229.2 339 42.5
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 8.4e-58 228.4 339 41.9
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 1.1e-57 228.0 174 65.5
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 1.9e-57 227.3 342 40.9
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 1.9e-57 227.3 313 45.0
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 3.2e-57 226.5 354 40.1
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 9.2e-57 224.9 333 43.5
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 6.0e-56 222.2 393 39.7
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 6.0e-56 222.2 232 51.3
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.0e-55 221.5 336 44.3
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 3.9e-55 219.5 332 42.5
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 3.9e-55 219.5 332 42.8
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 6.6e-55 218.8 363 38.6
Eucgr.F02023 Eucalyptus grandis HOM05D006765 ORTHO05D008554 6.6e-55 218.8 174 68.4
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.5e-54 217.6 211 57.3
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 2.5e-54 216.9 333 40.8
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 3.3e-54 216.5 216 52.8
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 5.6e-54 215.7 353 39.9
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 7.3e-54 215.3 354 39.5
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 9.6e-54 214.9 335 41.5
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 9.6e-54 214.9 327 40.4
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 2.1e-53 213.8 338 41.4
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 2.1e-53 213.8 344 43.0
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 2.8e-53 213.4 201 58.7
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 2.8e-53 213.4 192 55.7
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 6.2e-53 212.2 369 37.4
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 8.1e-53 211.8 192 55.2
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 8.1e-53 211.8 374 37.4
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 1.4e-52 211.1 377 38.5
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 2.4e-52 210.3 350 36.9
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 3.1e-52 209.9 334 40.7
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 3.1e-52 209.9 398 36.7
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 4.0e-52 209.5 341 41.6
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 6.9e-52 208.8 220 53.2
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 3.4e-51 206.5 172 55.8
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 3.4e-51 206.5 193 57.0
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 4.4e-51 206.1 382 34.8
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 1.7e-50 204.1 213 48.4
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 1.7e-50 204.1 384 37.0
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 2.2e-50 203.8 372 36.0
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 2.2e-50 203.8 210 48.6
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 4.9e-50 202.6 341 37.8
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 1.1e-49 201.4 189 52.4
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 7.1e-49 198.7 195 52.3
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 9.3e-49 198.4 347 38.6
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.2e-48 198.0 391 37.6
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 1.2e-48 198.0 170 57.1
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 2.7e-48 196.8 208 52.9
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 2.5e-46 190.3 378 36.2
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 2.5e-46 190.3 381 34.6
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.3e-45 188.0 212 50.0
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 6.2e-45 185.7 335 37.0
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 2.4e-44 183.7 152 62.5
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 5.3e-44 182.6 380 35.0
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 6.9e-44 182.2 257 42.4
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 2.0e-43 180.6 164 49.4
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 7.6e-43 178.7 199 45.7
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 1.2e-40 171.4 121 70.2
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 6.9e-36 155.6 159 56.0
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.3e-34 151.4 252 40.1
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 4.6e-32 142.9 249 39.4
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 8.7e-31 138.7 173 38.7
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 2.4e-28 130.6 119 52.1
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 4.0e-28 129.8 122 48.4
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 2.3e-23 114.0 297 29.0
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 1.3e-21 108.2 334 26.9
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 8.2e-21 105.5 90 55.6
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 1.7e-13 81.3 220 31.4
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 2.6e-11 73.9 264 23.9
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 4.5e-11 73.2 67 43.3
Manes.05G203050 Manihot esculenta HOM05D006765 ORTHO05D008554 5.1e-07 59.7 68 48.5


User provided reference genes

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