Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 2.4e-69 265.4 132 100.0
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 2.9e-51 205.3 131 80.2
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 5.5e-50 201.1 131 77.1
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 2.1e-49 199.1 132 72.0
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 2.7e-49 198.7 132 75.0
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 4.6e-49 198.0 132 75.8
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 7.9e-49 197.2 132 76.5
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 2.3e-48 195.7 133 75.2
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 2.3e-48 195.7 132 76.5
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 3.9e-48 194.9 130 74.6
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 5.1e-48 194.5 133 73.7
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 1.5e-47 193.0 132 74.2
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.5e-47 193.0 132 72.7
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.5e-47 193.0 132 72.7
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 1.5e-47 193.0 130 73.8
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 1.9e-47 192.6 133 73.7
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 3.3e-47 191.8 132 69.7
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 4.3e-47 191.4 136 71.3
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 4.3e-47 191.4 136 71.3
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 5.6e-47 191.0 132 71.2
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 9.6e-47 190.3 132 66.7
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 1.3e-46 189.9 134 73.1
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 2.8e-46 188.7 130 74.6
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 6.2e-46 187.6 129 69.0
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 2.4e-45 185.7 132 68.2
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 5.3e-45 184.5 130 67.7
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 1.2e-44 183.3 132 70.5
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 1.5e-44 183.0 136 71.3
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.4e-44 181.8 134 70.1
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 3.4e-44 181.8 98 82.7
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 4.5e-44 181.4 134 70.1
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 5.8e-44 181.0 132 66.7
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 7.6e-44 180.6 119 71.4
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 1.0e-43 180.3 133 67.7
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.0e-43 180.3 130 66.9
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 1.0e-43 180.3 130 66.9
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.3e-43 179.9 129 69.8
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.3e-43 179.9 134 69.4
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 1.3e-43 179.9 132 68.2
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 2.2e-43 179.1 144 66.0
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 2.2e-43 179.1 142 63.4
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 2.2e-43 179.1 141 65.2
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 2.2e-43 179.1 142 63.4
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 2.9e-43 178.7 146 65.1
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 2.9e-43 178.7 130 66.2
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 3.8e-43 178.3 141 65.2
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 3.8e-43 178.3 141 65.2
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 3.8e-43 178.3 141 65.2
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 3.8e-43 178.3 141 65.2
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 3.8e-43 178.3 136 69.9
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 3.8e-43 178.3 130 69.2
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 4.9e-43 177.9 133 69.9
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 6.5e-43 177.6 125 73.6
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 6.5e-43 177.6 129 68.2
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 6.5e-43 177.6 130 70.0
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 8.4e-43 177.2 122 71.3
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 8.4e-43 177.2 147 63.9
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 8.4e-43 177.2 143 62.9
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 8.4e-43 177.2 149 61.7
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 8.4e-43 177.2 132 68.2
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 1.4e-42 176.4 134 68.7
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 1.4e-42 176.4 134 68.7
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 1.4e-42 176.4 142 64.1
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 1.4e-42 176.4 142 64.1
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 1.4e-42 176.4 142 64.1
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 1.9e-42 176.0 139 67.6
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 1.9e-42 176.0 144 62.5
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 1.9e-42 176.0 138 66.7
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 3.2e-42 175.3 123 72.4
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 3.2e-42 175.3 133 66.9
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 4.2e-42 174.9 146 61.6
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 4.2e-42 174.9 130 70.8
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 5.5e-42 174.5 103 77.7
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 5.5e-42 174.5 129 63.6
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 5.5e-42 174.5 131 67.9
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 1.2e-41 173.3 132 67.4
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 1.2e-41 173.3 130 63.1
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 1.6e-41 172.9 137 60.6
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 2.1e-41 172.6 132 68.9
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 2.1e-41 172.6 132 68.9
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 2.7e-41 172.2 133 64.7
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 2.7e-41 172.2 101 82.2
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 3.5e-41 171.8 101 81.2
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 6.0e-41 171.0 142 63.4
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 6.0e-41 171.0 136 66.2
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 6.0e-41 171.0 130 62.3
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 1.0e-40 170.2 136 63.2
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 1.8e-40 169.5 131 65.6
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 2.3e-40 169.1 134 64.9
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 3.0e-40 168.7 134 62.7
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 5.1e-40 167.9 103 76.7
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 6.7e-40 167.5 103 76.7
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 1.1e-39 166.8 147 61.2
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 1.5e-39 166.4 147 60.5
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 1.9e-39 166.0 126 65.1
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 2.5e-39 165.6 98 77.6
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 5.7e-39 164.5 136 62.5
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 5.7e-39 164.5 138 63.0
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 1.3e-38 163.3 129 61.2
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 1.6e-38 162.9 111 66.7
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 2.2e-38 162.5 132 62.9
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 2.8e-38 162.2 101 72.3
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 4.8e-38 161.4 99 72.7
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 2.2e-35 152.5 120 62.5
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 2.2e-35 152.5 120 62.5
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 5.5e-34 147.9 107 65.4
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 2.1e-33 146.0 122 57.4
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 1.8e-32 142.9 100 62.0
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 2.3e-32 142.5 118 56.8
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 3.0e-32 142.1 110 61.8
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 6.7e-32 141.0 110 58.2
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 5.7e-31 137.9 109 61.5
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 1.5e-28 129.8 74 86.5
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 2.6e-28 129.0 123 52.0
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 2.5e-26 122.5 106 54.7
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 3.2e-26 122.1 103 51.5
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 4.2e-26 121.7 76 76.3
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 9.4e-26 120.6 102 52.0
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 7.9e-25 117.5 106 54.7
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 1.8e-21 106.3 74 67.6
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 6.9e-21 104.4 102 49.0
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 4.5e-20 101.7 76 53.9
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 3.0e-16 89.0 58 74.1
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.8e-14 81.6 72 56.9
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.2e-12 77.0 73 57.5
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 5.5e-10 68.2 58 60.3
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 3.6e-09 65.5 55 58.2


User provided reference genes

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