Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 3.9e-76 288.1 153 100.0
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 1.6e-24 116.7 81 60.5
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 3.0e-23 112.5 105 49.5
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 3.9e-23 112.1 69 68.1
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 5.0e-23 111.7 77 61.0
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 8.6e-23 110.9 73 65.8
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.1e-22 110.5 80 60.0
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 1.5e-22 110.2 78 61.5
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 1.9e-22 109.8 77 63.6
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 2.5e-22 109.4 58 74.1
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 2.5e-22 109.4 58 74.1
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 2.5e-22 109.4 89 55.1
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 4.3e-22 108.6 76 61.8
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 7.3e-22 107.8 58 74.1
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 9.5e-22 107.5 62 75.8
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 9.5e-22 107.5 77 63.6
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 1.2e-21 107.1 68 64.7
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 1.2e-21 107.1 59 72.9
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 4.7e-21 105.1 70 65.7
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 6.2e-21 104.8 66 66.7
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 6.2e-21 104.8 79 58.2
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 4.0e-20 102.1 70 62.9
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 1.5e-19 100.1 58 70.7
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 2.0e-19 99.8 69 56.5
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 2.0e-19 99.8 73 63.0
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 2.0e-19 99.8 75 54.7
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 2.0e-19 99.8 48 81.2
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 2.6e-19 99.4 60 70.0
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 4.4e-19 98.6 85 50.6
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 4.4e-19 98.6 69 58.0
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 4.4e-19 98.6 76 56.6
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 1.1e-17 94.0 40 90.0
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 5.4e-17 91.7 59 64.4
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 7.1e-17 91.3 44 75.0
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 2.1e-16 89.7 47 74.5
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 3.5e-16 89.0 77 53.2
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 3.5e-16 89.0 76 52.6
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 1.3e-15 87.0 49 67.3
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 1.3e-15 87.0 67 52.2
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 1.3e-15 87.0 61 52.5
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 5.1e-15 85.1 50 68.0
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 2.1e-13 79.7 71 49.3
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 2.1e-13 79.7 71 47.9
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 2.1e-13 79.7 71 47.9
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 2.1e-13 79.7 71 49.3
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 2.1e-13 79.7 71 49.3
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 2.1e-13 79.7 71 46.5
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 4.7e-13 78.6 71 46.5
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 6.2e-13 78.2 46 60.9
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 8.1e-13 77.8 71 46.5
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 8.1e-13 77.8 71 46.5
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 1.1e-12 77.4 43 69.8
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 1.8e-12 76.6 71 45.1
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 2.3e-12 76.3 71 46.5
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 4.0e-12 75.5 71 45.1
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 6.8e-12 74.7 46 60.9
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 6.8e-12 74.7 46 60.9
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 6.8e-12 74.7 71 45.1
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 8.9e-12 74.3 36 80.6
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 1.2e-11 73.9 38 73.7
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 1.5e-11 73.6 46 58.7
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 2.0e-11 73.2 46 60.9
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 3.4e-11 72.4 70 47.1
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 5.8e-11 71.6 46 58.7
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 7.6e-11 71.2 45 62.2
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 9.9e-11 70.9 57 56.1
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 3.8e-10 68.9 46 54.3
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 6.4e-10 68.2 42 57.1
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 1.6e-08 63.5 45 51.1
Phvul.009G014200 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 1.5e-06 57.0 61 39.3
Aqoxy5G01499 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 9.6e-06 54.3 66 42.4


User provided reference genes

Program Settings