Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 9.0e-153 543.5 266 100.0
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 9.2e-81 304.3 258 60.9
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 1.7e-79 300.1 233 61.8
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 5.1e-79 298.5 214 65.9
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 2.8e-77 292.7 213 65.3
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 3.4e-75 285.8 263 57.8
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 7.6e-75 284.6 227 62.1
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 6.4e-74 281.6 218 62.8
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 1.1e-73 280.8 224 62.5
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 2.4e-73 279.6 256 59.8
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 3.2e-73 279.3 198 66.2
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 7.1e-73 278.1 191 67.0
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 9.2e-73 277.7 256 56.6
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 1.2e-72 277.3 200 63.5
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 1.6e-72 276.9 194 64.9
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 2.1e-72 276.6 255 60.0
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 2.7e-72 276.2 249 60.2
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 3.5e-72 275.8 231 60.2
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 4.6e-72 275.4 213 64.3
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 1.0e-71 274.2 202 64.9
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.3e-71 273.9 198 64.6
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 1.3e-71 273.9 256 56.2
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 1.3e-71 273.9 246 59.8
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.7e-71 273.5 223 63.2
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 2.3e-71 273.1 213 64.3
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 3.0e-71 272.7 197 63.5
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 3.0e-71 272.7 233 57.5
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 3.0e-71 272.7 221 61.1
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 6.6e-71 271.6 197 62.9
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 1.5e-70 270.4 200 64.5
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 1.5e-70 270.4 210 61.0
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 2.5e-70 269.6 208 62.0
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 2.5e-70 269.6 214 66.4
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.5e-70 269.6 200 61.0
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 3.3e-70 269.2 208 62.0
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 3.3e-70 269.2 181 68.5
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 9.6e-70 267.7 200 61.0
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 1.2e-69 267.3 193 64.2
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 1.6e-69 266.9 196 62.8
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 1.6e-69 266.9 199 63.8
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 2.8e-69 266.2 198 63.6
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 3.6e-69 265.8 196 65.8
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 6.2e-69 265.0 205 60.0
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 8.1e-69 264.6 197 61.9
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 8.1e-69 264.6 205 62.4
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.1e-68 264.2 187 67.4
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.8e-68 263.5 288 53.1
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 5.2e-68 261.9 231 55.0
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 6.9e-68 261.5 186 62.9
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 9.0e-68 261.2 239 56.1
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.5e-67 260.4 229 58.5
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 4.4e-67 258.8 200 62.0
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 5.8e-67 258.5 193 61.1
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 7.6e-67 258.1 201 61.2
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 7.6e-67 258.1 214 57.9
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 9.9e-67 257.7 254 52.8
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 4.9e-66 255.4 168 69.6
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 6.4e-66 255.0 208 60.1
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 6.4e-66 255.0 198 63.1
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 8.4e-66 254.6 171 69.0
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 1.4e-65 253.8 209 61.2
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 1.9e-65 253.4 220 55.5
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 1.9e-65 253.4 162 71.0
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 1.9e-65 253.4 226 54.4
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.9e-65 253.4 252 52.8
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 2.4e-65 253.1 209 58.9
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.4e-65 253.1 197 59.4
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 2.4e-65 253.1 204 59.3
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 2.4e-65 253.1 214 58.9
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 5.4e-65 251.9 223 57.4
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 7.1e-65 251.5 200 59.5
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 7.1e-65 251.5 214 58.4
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 9.3e-65 251.1 235 54.5
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 1.2e-64 250.8 236 54.2
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 1.6e-64 250.4 225 55.6
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.6e-64 250.4 254 51.2
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.7e-64 249.6 261 55.9
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.7e-64 249.6 193 59.1
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 4.6e-64 248.8 214 57.5
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 7.8e-64 248.1 253 51.4
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 3.0e-63 246.1 188 61.7
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 3.9e-63 245.7 196 57.7
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 1.5e-62 243.8 233 54.1
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 1.5e-62 243.8 244 52.5
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 9.6e-62 241.1 189 65.1
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 1.6e-61 240.4 159 67.9
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.8e-61 239.6 162 66.0
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 2.8e-61 239.6 157 68.8
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.1e-60 237.7 195 57.9
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 2.4e-60 236.5 194 60.3
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 5.3e-60 235.3 194 58.8
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 2.6e-59 233.0 247 48.2
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 4.5e-59 232.3 181 59.7
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.2e-56 224.2 150 64.0
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 3.0e-55 219.5 218 50.5
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 4.0e-52 209.1 324 40.1
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.7e-50 203.8 120 75.0
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 4.6e-48 195.7 191 46.1
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.8e-47 193.7 190 51.1
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 5.6e-46 188.7 164 51.2
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 1.3e-45 187.6 190 44.2
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 3.2e-41 172.9 133 66.9
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 2.2e-37 160.2 160 43.8
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 4.1e-36 156.0 216 36.1
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 7.6e-35 151.8 147 55.1
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.9e-26 123.2 116 55.2
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 4.2e-25 119.4 259 32.0
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 2.3e-23 113.6 66 71.2
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 5.7e-22 109.0 180 32.8
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 1.4e-20 104.4 165 35.2
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 6.9e-20 102.1 73 64.4
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-16 91.3 78 55.1
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 1.1e-09 68.2 107 37.4
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 3.2e-09 66.6 51 54.9
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 6.7e-07 58.9 98 38.8
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 5.7e-06 55.8 32 71.9


User provided reference genes

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