Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 2.0e-102 375.9 209 100.0
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 7.3e-73 277.7 183 76.5
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 7.3e-73 277.7 183 76.5
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 3.6e-72 275.4 177 75.7
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 3.4e-70 268.9 182 73.6
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 3.4e-70 268.9 180 74.4
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 6.4e-69 264.6 184 74.5
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 8.3e-69 264.2 182 74.2
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 9.2e-68 260.8 178 71.3
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 1.2e-67 260.4 175 73.1
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.2e-67 260.4 179 71.5
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 2.0e-67 259.6 179 70.9
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 6.0e-67 258.1 180 70.6
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 6.6e-66 254.6 179 72.6
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.5e-65 253.4 174 71.8
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.9e-65 253.1 173 71.1
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 1.9e-65 253.1 185 67.6
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.9e-65 253.1 179 70.4
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 4.3e-65 251.9 175 69.1
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 7.3e-65 251.1 178 69.1
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 1.2e-64 250.4 164 72.0
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 1.2e-64 250.4 181 69.1
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 1.6e-64 250.0 160 72.5
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 2.1e-64 249.6 173 70.5
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 2.8e-64 249.2 182 67.6
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 3.6e-64 248.8 173 72.3
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 4.7e-64 248.4 180 68.3
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 6.2e-64 248.1 181 66.3
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 8.0e-64 247.7 173 69.9
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 8.0e-64 247.7 168 73.2
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 1.4e-63 246.9 168 75.6
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 2.3e-63 246.1 178 66.9
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 2.3e-63 246.1 183 66.1
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 6.8e-63 244.6 177 68.9
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 6.8e-63 244.6 168 75.6
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 8.9e-63 244.2 169 70.4
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 8.9e-63 244.2 178 69.1
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 1.2e-62 243.8 178 68.5
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 2.0e-62 243.0 165 72.7
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 2.0e-62 243.0 162 71.0
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 2.0e-62 243.0 168 73.2
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.6e-62 242.7 181 68.0
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 2.6e-62 242.7 163 76.1
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.4e-62 241.9 181 68.0
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.4e-62 241.9 182 67.0
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 5.8e-62 241.5 177 68.9
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 7.5e-62 241.1 182 67.0
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 9.8e-62 240.7 176 65.9
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.3e-61 240.4 181 66.3
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 1.7e-61 240.0 178 69.1
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 3.7e-61 238.8 172 68.0
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 8.3e-61 237.7 175 68.6
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 1.4e-60 236.9 152 76.3
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 1.9e-60 236.5 161 71.4
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 1.2e-59 233.8 179 67.0
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.6e-59 233.4 165 69.1
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 2.7e-59 232.6 161 70.2
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 3.5e-59 232.3 161 70.2
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 4.6e-59 231.9 175 66.9
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 4.6e-59 231.9 182 68.1
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 4.6e-59 231.9 179 67.0
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 6.0e-59 231.5 174 63.2
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 7.8e-59 231.1 178 66.3
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 6.6e-58 228.0 177 65.5
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 8.6e-58 227.6 167 70.7
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 1.1e-57 227.3 167 70.7
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.2e-56 223.8 171 67.3
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 2.1e-56 223.0 240 51.2
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 3.6e-56 222.2 175 64.6
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 1.1e-55 220.7 173 67.6
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 4.0e-55 218.8 179 63.7
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 6.8e-55 218.0 136 79.4
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 1.5e-54 216.9 175 64.0
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 4.4e-54 215.3 139 74.8
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 5.8e-54 214.9 177 63.8
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 2.2e-53 213.0 175 62.9
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 2.2e-53 213.0 165 64.8
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 2.9e-53 212.6 165 66.1
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 2.9e-53 212.6 162 63.6
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 1.4e-52 210.3 179 59.2
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.4e-52 209.5 148 68.9
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 4.1e-52 208.8 152 67.1
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 5.4e-52 208.4 160 63.8
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 5.4e-52 208.4 160 63.8
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 1.2e-51 207.2 154 70.1
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 1.2e-51 207.2 160 63.1
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.2e-51 207.2 160 63.1
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 1.2e-51 207.2 132 74.2
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.6e-51 206.8 160 63.1
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 7.8e-51 204.5 136 74.3
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 2.3e-50 203.0 146 71.9
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 7.6e-46 188.0 133 69.2
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.5e-41 173.7 188 53.7
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 3.6e-40 169.1 182 52.2
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 3.1e-39 166.0 127 67.7
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 9.9e-38 161.0 162 54.9
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.4e-36 156.4 172 52.9
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.1e-35 153.3 156 50.0
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 1.3e-34 150.6 195 46.2
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 2.4e-28 129.8 95 69.5
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 4.6e-27 125.6 151 44.4
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 3.9e-26 122.5 83 65.1
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.1e-25 120.9 80 67.5
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.0e-21 107.8 167 41.9
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 1.4e-20 104.0 127 45.7
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 2.5e-20 103.2 88 61.4
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 2.5e-20 103.2 177 33.9
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 3.5e-19 99.4 74 62.2
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 1.4e-15 87.4 138 39.1
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 1.0e-13 81.3 48 77.1
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 1.3e-10 70.9 41 78.0
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 9.0e-07 58.2 69 43.5
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 2.6e-06 56.6 36 63.9


User provided reference genes

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