Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 3.9e-71 271.6 158 100.0
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 1.6e-48 196.4 156 68.6
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 6.8e-47 191.0 154 67.5
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 1.2e-46 190.3 156 73.7
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 4.4e-46 188.3 156 68.6
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 4.4e-46 188.3 158 66.5
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.3e-45 186.8 132 72.7
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 1.3e-45 186.8 156 69.2
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 2.8e-45 185.7 132 73.5
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 4.8e-45 184.9 155 63.9
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 6.3e-45 184.5 151 74.8
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 6.3e-45 184.5 156 63.5
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 1.1e-44 183.7 156 67.9
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 1.1e-44 183.7 153 61.4
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 1.1e-44 183.7 156 64.1
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.4e-44 183.3 131 72.5
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 4.1e-44 181.8 155 63.2
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 7.0e-44 181.0 153 64.1
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 7.0e-44 181.0 157 63.1
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 9.1e-44 180.6 159 64.2
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 9.1e-44 180.6 153 64.1
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 1.2e-43 180.3 156 62.8
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 1.2e-43 180.3 126 71.4
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 1.2e-43 180.3 157 68.8
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 1.6e-43 179.9 156 62.8
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 2.0e-43 179.5 154 62.3
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 2.7e-43 179.1 155 61.3
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 3.5e-43 178.7 153 61.4
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 3.5e-43 178.7 157 61.8
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 5.9e-43 177.9 156 62.8
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 7.7e-43 177.6 152 64.5
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 7.7e-43 177.6 155 61.9
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 7.7e-43 177.6 156 61.5
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.0e-42 177.2 154 58.4
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 1.0e-42 177.2 153 62.7
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 1.0e-42 177.2 157 70.7
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.0e-42 177.2 157 60.5
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 1.3e-42 176.8 126 70.6
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 1.7e-42 176.4 127 71.7
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 1.7e-42 176.4 157 58.6
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 2.2e-42 176.0 126 67.5
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 2.2e-42 176.0 131 68.7
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 2.2e-42 176.0 157 63.7
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.2e-42 176.0 155 61.3
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 2.9e-42 175.6 153 62.1
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 2.9e-42 175.6 155 59.4
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 2.9e-42 175.6 155 61.3
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 2.9e-42 175.6 155 60.0
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 3.8e-42 175.3 153 62.1
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 5.0e-42 174.9 156 69.9
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 5.0e-42 174.9 124 69.4
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 5.0e-42 174.9 124 67.7
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 6.5e-42 174.5 157 62.4
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 8.5e-42 174.1 155 60.0
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 8.5e-42 174.1 131 68.7
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 1.1e-41 173.7 156 57.7
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 1.1e-41 173.7 157 62.4
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 1.5e-41 173.3 157 61.8
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 1.5e-41 173.3 157 61.8
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.5e-41 173.3 125 70.4
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.9e-41 172.9 124 68.5
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.5e-41 172.6 126 66.7
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 3.2e-41 172.2 155 58.1
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 3.2e-41 172.2 128 69.5
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 4.2e-41 171.8 122 71.3
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 5.5e-41 171.4 125 68.8
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 7.2e-41 171.0 126 62.7
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 7.2e-41 171.0 156 68.6
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 7.2e-41 171.0 154 66.9
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 1.2e-40 170.2 155 59.4
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 1.2e-40 170.2 158 56.3
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 1.6e-40 169.9 153 56.9
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.6e-40 169.9 156 69.2
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 2.1e-40 169.5 130 75.4
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 2.1e-40 169.5 147 66.0
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 3.6e-40 168.7 156 59.6
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 4.7e-40 168.3 131 64.9
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 4.7e-40 168.3 143 63.6
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 4.7e-40 168.3 146 58.9
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 6.1e-40 167.9 149 67.8
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 8.0e-40 167.5 131 67.2
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 1.0e-39 167.2 122 69.7
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 2.3e-39 166.0 128 78.9
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 3.0e-39 165.6 124 66.1
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 4.0e-39 165.2 125 79.2
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 6.8e-39 164.5 155 56.1
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 6.8e-39 164.5 152 64.5
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 8.8e-39 164.1 124 66.9
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 8.8e-39 164.1 122 67.2
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 1.2e-38 163.7 123 67.5
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 1.5e-38 163.3 147 66.7
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 2.0e-38 162.9 130 66.9
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 2.0e-38 162.9 157 68.8
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 7.5e-38 161.0 129 60.5
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 9.8e-38 160.6 162 58.6
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 3.7e-37 158.7 120 67.5
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 4.9e-37 158.3 125 66.4
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 4.9e-37 158.3 152 59.2
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 6.3e-37 157.9 159 57.9
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 3.1e-36 155.6 148 55.4
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 5.4e-36 154.8 133 60.9
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 9.2e-36 154.1 132 59.8
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 1.6e-35 153.3 148 56.1
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 1.3e-34 150.2 149 53.7
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 2.5e-33 146.0 122 59.8
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 3.0e-31 139.0 129 54.3
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 2.0e-30 136.3 156 51.9
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 1.7e-29 133.3 156 51.3
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 4.6e-27 125.2 156 49.4
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.0e-26 124.0 122 53.3
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 3.0e-26 122.5 122 50.0
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 2.5e-25 119.4 158 47.5
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.6e-24 116.7 129 49.6
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 6.2e-24 114.8 89 65.2
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 8.9e-23 110.9 105 58.1
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 9.8e-22 107.5 118 50.0
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 5.0e-18 95.1 151 41.7
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 6.6e-18 94.7 81 51.9
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 8.6e-18 94.4 125 46.4
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 4.7e-16 88.6 86 55.8
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 4.0e-15 85.5 80 48.8
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 8.6e-10 67.8 87 50.6
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.9e-09 66.6 113 37.2


User provided reference genes

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