Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.4e-226 789.3 381 100.0
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 2.9e-176 622.1 304 98.7
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.5e-172 609.8 378 75.9
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.4e-169 598.6 379 73.1
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.1e-166 589.3 379 73.4
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 3.5e-166 588.6 380 73.2
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 4.6e-166 588.2 378 72.8
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 6.0e-166 587.8 379 73.4
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 7.8e-166 587.4 379 73.1
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 4.7e-163 578.2 380 72.1
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.4e-162 576.6 376 71.0
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 2.4e-162 575.9 379 68.6
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 4.0e-162 575.1 379 70.7
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.2e-161 573.5 379 70.2
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 7.6e-161 570.9 379 69.9
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 9.9e-161 570.5 379 72.6
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 2.9e-160 568.9 379 70.2
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 3.8e-160 568.5 379 69.9
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 8.4e-160 567.4 379 69.9
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 3.5e-158 562.0 377 67.9
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 5.1e-157 558.1 379 69.9
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 2.5e-156 555.8 379 68.6
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 2.8e-155 552.4 378 69.0
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 3.6e-155 552.0 379 68.9
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 4.7e-155 551.6 373 70.8
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 3.1e-154 548.9 379 67.5
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 3.1e-154 548.9 379 67.5
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 6.9e-154 547.7 377 68.4
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 9.0e-154 547.4 379 69.4
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.2e-153 547.0 373 69.2
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 2.0e-153 546.2 426 63.8
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 1.3e-152 543.5 411 63.7
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 4.2e-151 538.5 369 69.4
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 7.1e-151 537.7 377 68.7
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 2.7e-150 535.8 381 68.5
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 2.7e-150 535.8 375 67.7
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 7.8e-150 534.3 373 69.4
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 1.3e-149 533.5 374 67.9
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.0e-149 532.3 359 69.9
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 4.3e-148 528.5 379 65.7
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 9.6e-148 527.3 398 63.1
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.3e-147 526.9 380 68.2
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 1.6e-147 526.6 380 66.3
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 2.8e-147 525.8 382 66.5
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 3.6e-147 525.4 375 66.7
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 4.8e-147 525.0 379 66.0
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 8.1e-147 524.2 379 65.7
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 1.1e-146 523.9 363 70.5
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.1e-146 523.9 375 66.9
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 5.3e-146 521.5 363 70.0
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 6.9e-146 521.2 379 65.4
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.2e-145 520.4 375 66.4
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.0e-145 519.6 379 64.4
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 3.4e-145 518.8 379 65.4
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.7e-144 516.5 380 63.2
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 6.4e-144 514.6 374 66.3
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 1.4e-143 513.5 381 63.3
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 3.2e-143 512.3 355 69.6
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 4.2e-143 511.9 381 64.3
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 7.1e-143 511.1 376 63.8
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 7.9e-142 507.7 374 65.2
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.0e-141 507.3 371 64.4
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 3.0e-141 505.8 380 63.2
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 3.0e-141 505.8 380 61.8
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 8.7e-141 504.2 373 64.3
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 8.7e-141 504.2 380 63.2
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 8.7e-141 504.2 375 65.6
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.5e-140 503.4 380 62.9
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 1.9e-140 503.1 381 64.8
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 2.8e-139 499.2 382 61.8
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 8.1e-139 497.7 380 62.1
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 6.9e-138 494.6 379 61.2
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 9.0e-138 494.2 389 61.2
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 2.0e-137 493.0 381 61.9
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 2.0e-137 493.0 381 61.9
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 5.5e-135 485.0 358 63.1
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.0e-133 480.7 354 64.1
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 2.3e-133 479.6 381 63.3
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 3.9e-133 478.8 375 61.6
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 8.7e-133 477.6 375 61.9
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 1.5e-132 476.9 376 60.4
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 9.6e-132 474.2 375 61.6
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 9.0e-130 467.6 325 69.8
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 2.9e-128 462.6 379 59.6
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 1.1e-127 460.7 378 59.3
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 7.1e-127 458.0 369 58.5
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 1.6e-123 446.8 379 57.5
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 5.3e-122 441.8 376 57.2
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 6.9e-122 441.4 327 65.4
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 2.0e-121 439.9 288 72.9
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 2.0e-121 439.9 359 62.1
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 3.4e-121 439.1 379 58.3
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 5.9e-121 438.3 401 55.6
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 1.4e-119 433.7 373 55.2
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 3.2e-119 432.6 376 56.4
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 9.4e-119 431.0 379 57.3
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 1.0e-117 427.6 379 56.2
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 6.7e-117 424.9 305 66.9
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 8.2e-115 417.9 383 56.4
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 4.5e-113 412.1 274 72.3
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 8.5e-112 407.9 259 75.3
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 6.1e-110 401.7 379 55.7
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 1.0e-104 384.4 402 51.2
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 5.0e-104 382.1 281 65.1
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.6e-97 360.5 343 54.5
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 7.7e-97 358.2 256 65.6
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 1.0e-96 357.8 225 75.1
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 1.6e-94 350.5 287 61.0
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 2.0e-89 333.6 364 47.3
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 3.2e-87 326.2 374 42.8
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 4.2e-87 325.9 375 43.7
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 7.5e-84 315.1 376 44.4
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 1.1e-82 311.2 217 66.4
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 2.5e-71 273.5 183 67.8
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 2.6e-68 263.5 392 34.4
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 1.1e-63 248.1 196 60.2
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 4.9e-51 206.1 164 59.8
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 8.7e-40 168.7 151 54.3
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 2.1e-30 137.5 103 69.9
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 1.1e-29 135.2 116 56.0
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 6.9e-29 132.5 211 39.8
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 2.0e-28 131.0 112 54.5
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 7.4e-15 85.9 46 78.3
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 8.2e-14 82.4 77 54.5
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 1.0e-11 75.5 137 34.3


User provided reference genes

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