Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 0.0e+00 1098.6 542 100.0
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 9.0e-200 700.7 547 63.1
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 7.6e-199 697.6 542 63.3
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 6.5e-198 694.5 542 60.9
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 3.2e-197 692.2 542 62.4
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 5.5e-197 691.4 542 61.1
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 1.2e-196 690.3 542 62.7
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 2.7e-196 689.1 542 60.9
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 3.5e-196 688.7 568 58.3
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 3.3e-194 682.2 542 61.8
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 4.3e-194 681.8 542 61.6
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 2.8e-193 679.1 543 61.9
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 3.7e-193 678.7 543 60.4
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 1.8e-192 676.4 543 60.6
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 1.5e-191 673.3 542 60.1
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 3.8e-190 668.7 542 59.2
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 8.4e-190 667.5 542 59.8
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 1.4e-189 666.8 543 58.2
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 1.4e-189 666.8 543 58.6
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 1.9e-189 666.4 542 58.9
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 2.5e-189 666.0 542 60.7
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.5e-189 666.0 542 59.6
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 1.6e-188 663.3 542 58.7
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 1.1e-186 657.1 542 61.1
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 2.5e-186 656.0 548 59.9
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 9.0e-184 647.5 543 59.1
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 5.9e-183 644.8 542 57.7
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 7.7e-183 644.4 543 57.1
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 7.7e-183 644.4 543 57.5
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 2.2e-182 642.9 543 57.8
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 3.2e-181 639.0 544 56.2
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 7.2e-181 637.9 544 56.8
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 1.2e-180 637.1 543 57.1
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 2.7e-180 636.0 542 55.5
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 3.6e-180 635.6 543 56.5
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 3.6e-180 635.6 543 56.5
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 6.1e-180 634.8 544 56.4
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 6.1e-180 634.8 545 58.0
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 1.8e-179 633.3 543 56.0
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 2.3e-179 632.9 538 57.1
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.0e-179 632.5 542 56.1
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 6.7e-179 631.3 542 56.1
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 2.0e-178 629.8 542 56.1
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.8e-177 625.9 542 55.4
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 3.7e-177 625.5 543 57.3
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 2.4e-176 622.9 542 57.2
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.2e-175 620.5 546 56.2
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 4.5e-175 618.6 565 55.0
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 3.8e-174 615.5 542 56.1
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 5.0e-174 615.1 574 53.1
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 3.2e-173 612.5 544 55.7
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 5.5e-173 611.7 542 55.0
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 5.5e-173 611.7 542 55.2
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.6e-172 610.1 474 62.4
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 6.1e-172 608.2 542 55.5
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.0e-171 607.4 542 54.4
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 1.0e-171 607.4 542 54.1
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 1.4e-171 607.1 544 56.1
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.9e-171 605.5 542 53.3
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 3.9e-171 605.5 542 55.0
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 8.8e-171 604.4 543 53.6
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 1.1e-170 604.0 542 55.0
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 2.6e-170 602.8 542 55.4
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 4.4e-170 602.1 538 55.4
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 7.4e-170 601.3 542 55.4
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 9.7e-170 600.9 543 53.6
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 1.3e-169 600.5 542 54.8
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 2.2e-169 599.7 544 55.1
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 1.1e-168 597.4 542 54.8
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 5.3e-168 595.1 542 54.2
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.2e-167 594.0 543 54.9
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 5.9e-167 591.7 542 54.8
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 7.7e-167 591.3 544 56.2
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 1.9e-165 586.6 545 55.6
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 9.4e-165 584.3 544 54.4
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 3.6e-164 582.4 543 54.1
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 8.0e-164 581.3 543 54.0
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 2.3e-163 579.7 542 52.6
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 6.7e-163 578.2 602 51.8
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.0e-162 576.6 634 47.5
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 6.3e-161 571.6 543 53.0
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 2.0e-159 566.6 493 56.2
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 6.5e-158 561.6 549 51.5
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.1e-157 560.8 460 55.9
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 1.5e-157 560.5 549 51.5
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 1.0e-155 554.3 492 55.5
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 5.2e-155 552.0 430 63.0
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 1.2e-148 530.8 593 47.0
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 2.0e-146 523.5 561 51.2
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 3.8e-142 509.2 544 48.7
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 3.2e-136 489.6 449 54.6
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 5.9e-135 485.3 467 50.5
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 1.6e-132 477.2 489 49.1
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 4.0e-131 472.6 559 47.2
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 8.9e-131 471.5 542 49.1
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.3e-129 467.6 555 47.0
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.4e-128 464.2 555 46.8
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.1e-119 433.7 311 66.2
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 3.3e-117 426.4 483 46.4
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 3.6e-108 396.4 401 49.1
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 6.7e-86 322.4 557 32.3
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 6.5e-81 305.8 471 37.8
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 7.1e-80 302.4 573 35.3
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 2.1e-79 300.8 223 65.5
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.0e-78 298.5 561 32.6
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 3.3e-77 293.5 574 35.7
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 8.2e-76 288.9 566 35.5
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 2.5e-64 250.8 208 54.8
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.7e-47 194.1 187 52.4
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 6.3e-44 183.0 248 39.5
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 2.1e-39 167.9 109 68.8
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 3.4e-29 134.0 120 50.0
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 4.9e-28 130.2 197 38.6
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 9.5e-24 115.9 76 72.4
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 5.0e-17 93.6 126 42.9
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 6.2e-15 86.7 135 40.7
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 8.0e-15 86.3 60 55.0
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 3.3e-08 64.3 68 47.1
Glyma.19G197300 Glycine max HOM05D006431 ORTHO05D007918 9.5e-08 62.8 203 23.6
Glyma.03G199700 Glycine max HOM05D006431 ORTHO05D007918 2.1e-07 61.6 203 23.2
Phvul.001G193600 Phaseolus vulgaris HOM05D006431 ORTHO05D007918 2.8e-07 61.2 190 22.1
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 1.8e-06 58.5 96 33.3
EL10Ac7g16823 Beta vulgaris HOM05D006431 ORTHO05D007918 3.1e-06 57.8 150 26.7


User provided reference genes

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