Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 0.0e+00 1327.8 656 100.0
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 0.0e+00 1095.1 656 78.5
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 0.0e+00 1081.2 649 77.7
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 0.0e+00 1080.9 649 77.8
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 0.0e+00 1078.9 654 77.5
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 0.0e+00 1077.8 656 77.0
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 0.0e+00 1077.8 656 80.0
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 9.0e-312 1073.2 643 78.1
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 9.0e-312 1073.2 656 76.8
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 2.0e-310 1068.5 656 75.8
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 5.8e-310 1067.0 645 80.0
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 5.8e-310 1067.0 647 77.6
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 9.9e-310 1066.2 656 75.9
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 2.4e-308 1061.6 656 76.2
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 3.2e-308 1061.2 695 74.4
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 9.2e-308 1059.7 654 76.1
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 2.7e-307 1058.1 656 76.1
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 4.6e-307 1057.4 656 75.9
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 3.0e-306 1054.7 656 75.5
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 5.1e-306 1053.9 654 75.7
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 2.5e-305 1051.6 656 75.3
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 5.6e-305 1050.4 656 74.7
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 9.6e-305 1049.7 656 74.5
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 3.6e-304 1047.7 650 74.3
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 4.7e-304 1047.3 643 76.2
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 6.2e-304 1047.0 656 75.2
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 8.1e-304 1046.6 656 73.8
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 8.1e-304 1046.6 650 74.5
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 2.4e-303 1045.0 656 73.8
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 3.1e-303 1044.6 654 75.7
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 4.0e-303 1044.3 681 72.1
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 9.0e-303 1043.1 656 74.1
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 1.7e-301 1038.9 649 74.6
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 8.4e-301 1036.6 643 76.5
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 8.4e-301 1036.6 656 73.0
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 3.2e-300 1034.6 660 73.6
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 1.2e-299 1032.7 660 74.5
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 1.6e-299 1032.3 644 76.1
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 4.6e-299 1030.8 639 77.3
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 4.6e-299 1030.8 654 72.9
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 1.0e-298 1029.6 656 72.7
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 9.6e-297 1023.1 656 71.8
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 2.1e-296 1021.9 655 71.9
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 3.6e-296 1021.1 663 72.2
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.4e-295 1019.2 657 72.8
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 5.3e-295 1017.3 729 67.6
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 5.3e-295 1017.3 646 72.1
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 1.5e-294 1015.8 646 72.8
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 3.4e-294 1014.6 656 71.0
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 4.5e-294 1014.2 649 71.5
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 5.8e-294 1013.8 655 71.9
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 1.7e-293 1012.3 651 72.0
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 6.4e-293 1010.4 639 75.3
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 8.4e-293 1010.0 637 74.3
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 1.9e-292 1008.8 646 73.1
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 5.4e-292 1007.3 656 73.0
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 7.1e-292 1006.9 674 70.0
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 1.3e-290 1002.7 642 72.0
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 6.7e-290 1000.3 655 71.6
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 5.6e-289 997.3 810 62.7
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 2.1e-288 995.3 656 71.5
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.1e-287 993.0 655 70.2
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 1.4e-287 992.6 657 70.9
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 3.1e-287 991.5 663 69.8
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 1.3e-285 986.1 654 70.0
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 1.7e-285 985.7 655 69.6
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 1.7e-285 985.7 618 74.3
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 6.4e-285 983.8 656 69.5
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 1.1e-284 983.0 640 71.1
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 1.9e-284 982.2 658 69.0
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 3.2e-284 981.5 640 70.5
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 7.1e-284 980.3 650 69.4
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 9.3e-284 979.9 651 69.4
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 1.2e-283 979.5 612 74.2
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 1.2e-283 979.5 656 70.3
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 6.0e-283 977.2 647 69.9
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 6.0e-283 977.2 652 70.2
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 5.1e-282 974.2 640 70.5
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 1.1e-281 973.0 602 76.1
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 4.3e-281 971.1 640 70.2
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 4.3e-281 971.1 640 70.2
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 4.3e-281 971.1 640 70.2
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 2.4e-279 965.3 598 75.1
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 6.9e-279 963.8 798 60.2
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 3.9e-274 948.0 656 68.9
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 1.9e-273 945.7 656 71.6
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 3.4e-270 934.9 663 65.9
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 4.6e-267 924.5 592 74.5
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 1.5e-257 892.9 648 68.5
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 1.4e-252 876.3 598 67.9
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 6.7e-250 867.5 562 70.5
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 1.5e-249 866.3 562 72.8
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 1.1e-244 850.1 579 70.6
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 3.3e-241 838.6 644 59.6
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 3.3e-241 838.6 646 61.1
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 5.5e-228 794.7 651 57.9
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 2.4e-199 699.5 514 66.7
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 2.7e-182 642.9 363 77.4
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 6.0e-166 588.6 376 75.8
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 3.5e-158 562.8 562 51.6
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 5.0e-152 542.3 377 67.6
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 1.6e-150 537.3 383 67.4
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 7.7e-137 491.9 537 48.4
AUR62041680 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.9e-111 407.5 241 75.1
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 1.3e-88 331.6 746 32.7
SEGI_38008 Sequoiadendron giganteum HOM05D006576 ORTHO05D008644 2.1e-65 254.6 152 73.7
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 1.1e-61 242.3 245 53.9
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 2.8e-54 217.6 204 57.8
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 3.3e-23 114.4 94 57.4
Atru.chr11.1906 Acer truncatum HOM05D006576 ORTHO05D008644 7.4e-23 113.2 65 75.4
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 8.2e-22 109.8 70 65.7
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.1e-21 109.4 71 64.8
CBR_g55378 Chara braunii HOM05D006576 ORTHO05D028753 5.9e-20 103.6 83 56.6
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 5.9e-20 103.6 64 71.9
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 2.5e-18 98.2 70 60.0
Nn2g14734 Nelumbo nucifera HOM05D006576 ORTHO05D008644 5.5e-18 97.1 90 56.7
Zm00001eb326440 Zea mays HOM05D006576 ORTHO05D028753 1.2e-17 95.9 72 65.3
Zm00001eb361570 Zea mays HOM05D006576 ORTHO05D028753 1.2e-17 95.9 72 65.3
Zm00001eb377960 Zea mays HOM05D006576 ORTHO05D028753 1.2e-17 95.9 72 65.3
Nn7g38200 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.6e-17 95.5 71 64.8
Zm00001eb171910 Zea mays HOM05D000538 ORTHO05D003297 1.7e-14 85.5 95 47.4
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.0e-11 76.3 52 59.6
AL4G26800 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 3.8e-11 74.3 99 46.5
Zm00001eb147180 Zea mays HOM05D014217 ORTHO05D000496 2.0e-07 62.0 118 34.7
Zm00001eb413530 Zea mays HOM05D014217 ORTHO05D000496 1.7e-06 58.9 63 49.2


User provided reference genes

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