Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 3.7e-312 1074.7 537 100.0
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 2.2e-198 696.0 532 66.9
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 1.1e-197 693.7 565 63.5
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 9.2e-197 690.6 557 65.0
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 3.0e-195 685.6 563 64.3
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 2.1e-193 679.5 554 63.2
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 2.6e-191 672.5 585 60.7
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 1.3e-190 670.2 560 61.4
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.1e-189 667.2 558 61.5
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 6.0e-188 661.4 555 62.0
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 1.7e-187 659.8 550 62.7
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 3.3e-186 655.6 556 61.3
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 4.8e-185 651.7 559 60.8
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 1.2e-183 647.1 564 59.2
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 7.6e-183 644.4 555 61.3
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 7.6e-183 644.4 536 62.1
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 1.4e-181 640.2 561 59.4
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 4.2e-181 638.6 597 58.1
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 4.2e-181 638.6 549 59.7
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 5.4e-181 638.3 558 58.8
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 2.7e-180 636.0 562 59.4
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 3.0e-179 632.5 548 59.5
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 8.7e-179 630.9 569 57.6
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 2.5e-178 629.4 534 60.1
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 1.6e-177 626.7 579 58.5
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 3.6e-177 625.5 557 59.2
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 4.0e-176 622.1 583 56.6
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 9.0e-176 620.9 537 59.2
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 1.5e-175 620.2 563 57.2
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 9.9e-175 617.5 534 59.9
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 2.2e-174 616.3 615 55.1
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 2.9e-174 615.9 534 59.9
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 2.9e-174 615.9 546 59.0
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 3.8e-174 615.5 548 58.8
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 4.9e-174 615.1 548 59.9
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.1e-173 614.0 532 59.6
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 1.9e-173 613.2 543 58.9
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 2.4e-173 612.8 533 58.9
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 7.1e-173 611.3 556 59.2
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 9.3e-173 610.9 533 60.0
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 1.6e-172 610.1 533 58.7
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 2.3e-171 606.3 540 58.1
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 3.0e-171 605.9 621 54.1
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 5.1e-171 605.1 559 56.4
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 4.3e-170 602.1 536 58.2
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 1.6e-169 600.1 547 58.3
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 3.7e-169 599.0 554 57.8
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 3.7e-169 599.0 571 55.0
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 4.8e-169 598.6 542 57.6
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 1.5e-167 593.6 595 54.8
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 2.2e-166 589.7 533 57.0
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 2.9e-166 589.3 595 54.5
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 3.8e-166 589.0 570 55.6
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 6.5e-166 588.2 577 56.0
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 8.4e-166 587.8 545 57.4
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 1.4e-165 587.0 642 52.0
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 9.3e-165 584.3 536 56.3
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 2.1e-164 583.2 548 54.6
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.4e-160 570.5 574 54.2
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.4e-160 569.7 499 59.3
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 1.7e-158 563.5 570 52.5
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.9e-154 550.1 504 57.5
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 4.1e-152 542.3 562 52.0
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 1.5e-151 540.4 520 56.9
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 1.0e-150 537.7 494 56.9
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 2.2e-150 536.6 507 55.8
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.9e-149 533.5 516 56.8
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 6.1e-148 528.5 520 55.8
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 1.8e-147 526.9 558 52.7
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 9.1e-144 514.6 561 49.6
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 3.0e-139 499.6 542 51.3
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 3.9e-139 499.2 408 62.0
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 2.8e-129 466.5 493 51.9
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 8.2e-129 464.9 501 51.5
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 8.2e-129 464.9 377 62.3
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 5.7e-122 442.2 562 46.1
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.6e-119 434.1 558 43.7
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 2.9e-110 403.3 587 40.2
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.1e-108 397.1 441 48.8
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 1.0e-107 394.8 349 57.0
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.0e-103 380.6 530 41.1
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.0e-99 368.2 282 66.0
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 1.0e-99 368.2 369 57.2
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 1.3e-97 361.3 373 55.2
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 3.2e-96 356.7 274 64.2
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 1.9e-93 347.4 338 57.1
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 9.8e-90 335.1 422 46.4
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 5.1e-86 322.8 283 58.7
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 2.6e-74 283.9 283 53.7
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.6e-71 274.6 218 60.6
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 6.0e-71 272.7 436 42.0
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 4.9e-65 253.1 246 56.9
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 8.7e-54 215.7 211 57.3
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 3.7e-52 210.3 241 49.8
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 4.3e-45 186.8 159 62.9
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.4e-43 181.0 189 50.3
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.4e-43 181.0 189 50.3
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 9.0e-43 179.1 189 54.5
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 3.2e-40 170.6 124 61.3
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 7.9e-39 166.0 101 74.3
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 1.8e-38 164.9 201 44.8
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 7.7e-34 149.4 171 48.5
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 3.6e-31 140.6 117 50.4
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 5.3e-27 126.7 95 62.1
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 6.5e-25 119.8 160 46.2
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 5.2e-14 83.6 133 44.4
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.3e-12 79.0 148 38.5
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 1.2e-10 72.4 317 23.7
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 1.3e-09 68.9 68 54.4
FAN16G0561 Fragaria x ananassa HOM05D007146 ORTHO05D008971 4.7e-07 60.5 86 47.7


User provided reference genes

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