Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01372 Eucalyptus grandis HOM05D007501 ORTHO05D009528 4.4e-103 377.9 180 100.0
MD03G1250700 Malus domestica HOM05D007501 ORTHO05D009528 2.0e-47 193.0 161 60.2
MD11G1270900 Malus domestica HOM05D007501 ORTHO05D009528 6.5e-46 188.0 166 57.8
RcHm_v2.0_Chr5g0029351 Rosa chinensis HOM05D007501 ORTHO05D009528 1.5e-45 186.8 171 56.7
GSVIVG01014087001 Vitis vinifera HOM05D007501 ORTHO05D009528 3.2e-45 185.7 166 58.4
PGR083G0065 Punica granatum HOM05D007501 ORTHO05D009528 4.0e-43 178.7 160 58.8
FAN21G3657 Fragaria x ananassa HOM05D007501 ORTHO05D009528 5.2e-43 178.3 167 55.7
Gohir.A11G289800 Gossypium hirsutum HOM05D007501 ORTHO05D009528 5.2e-43 178.3 164 57.9
Gorai.007G332200 Gossypium raimondii HOM05D007501 ORTHO05D009528 2.6e-42 176.0 164 57.3
Gohir.D11G302600 Gossypium hirsutum HOM05D007501 ORTHO05D009528 7.5e-42 174.5 164 56.7
FAN25G1377 Fragaria x ananassa HOM05D007501 ORTHO05D009528 9.7e-42 174.1 167 54.5
FvH4_3g17620 Fragaria vesca HOM05D007501 ORTHO05D009528 2.8e-41 172.6 166 52.4
FAN11G3003 Fragaria x ananassa HOM05D007501 ORTHO05D009528 2.8e-41 172.6 166 52.4
COL.COLO4_03607 Corchorus olitorius HOM05D007501 ORTHO05D009528 3.7e-41 172.2 163 55.2
CSS0000849 Camellia sinensis var. sinensis HOM05D007501 ORTHO05D009528 4.8e-41 171.8 173 55.5
QL08p025249 Quercus lobata HOM05D007501 ORTHO05D009528 1.1e-40 170.6 182 53.3
Prupe.4G155600 Prunus persica HOM05D007501 ORTHO05D009528 4.1e-40 168.7 172 52.3
Potri.011G103500 Populus trichocarpa HOM05D007501 ORTHO05D009528 5.3e-40 168.3 166 56.6
Manes.15G099000 Manihot esculenta HOM05D007501 ORTHO05D009528 1.2e-39 167.2 166 51.2
vmacro09418 Vaccinium macrocarpon HOM05D007501 ORTHO05D009528 2.0e-39 166.4 168 53.0
Haze_08443 Corylus avellana HOM05D007501 ORTHO05D009528 3.5e-39 165.6 171 50.3
TWI39G1127 Tripterygium wilfordii HOM05D007501 ORTHO05D009528 4.5e-39 165.2 160 52.5
RhsimUnG0206300 Rhododendron simsii HOM05D007501 ORTHO05D009528 5.9e-39 164.9 169 54.4
Ciclev10024060m.g Citrus clementina HOM05D007501 ORTHO05D009528 2.9e-38 162.5 164 53.0
Thecc.07G134800 Theobroma cacao HOM05D007501 ORTHO05D009528 5.0e-38 161.8 165 51.5
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 1.1e-37 160.6 164 53.0
Nn3g20958 Nelumbo nucifera HOM05D007501 ORTHO05D009528 1.5e-37 160.2 178 50.6
Sabra11G0077300 Salix brachista HOM05D007501 ORTHO05D009528 3.2e-37 159.1 162 54.3
Sabra11G0082200 Salix brachista HOM05D007501 ORTHO05D009528 3.2e-37 159.1 162 54.3
Dinv13355 Davidia involucrata HOM05D007501 ORTHO05D009528 4.2e-37 158.7 164 55.5
HanXRQChr11g0331231 Helianthus annuus HOM05D007501 ORTHO05D009528 4.2e-37 158.7 175 51.4
Manes.03G078700 Manihot esculenta HOM05D007501 ORTHO05D009528 4.2e-37 158.7 177 48.6
PSO675G1715 Papaver somniferum HOM05D007501 ORTHO05D009528 4.2e-37 158.7 167 51.5
Cfa019508 Carpinus fangiana HOM05D007501 ORTHO05D009528 9.4e-37 157.5 180 47.2
Cc05_g10640 Coffea canephora HOM05D007501 ORTHO05D009528 9.4e-37 157.5 165 52.7
Duzib213G0875 Durio zibethinus HOM05D007501 ORTHO05D009528 1.6e-36 156.8 156 54.5
PSO541G4098 Papaver somniferum HOM05D007501 ORTHO05D009528 1.6e-36 156.8 165 50.9
Peaxi162Scf01338g00001 Petunia axillaris HOM05D007501 ORTHO05D009528 1.8e-35 153.3 164 50.6
Oeu059251.1 Olea europaea HOM05D007501 ORTHO05D009528 4.0e-35 152.1 160 53.1
Potri.001G382800 Populus trichocarpa HOM05D007501 ORTHO05D009528 5.7e-34 148.3 173 52.6
arahy.Tifrunner.gnm1.ann1.5U50EQ Arachis hypogaea HOM05D007501 ORTHO05D009528 2.2e-33 146.4 168 48.2
Glyma.15G210500 Glycine max HOM05D007501 ORTHO05D009528 4.8e-33 145.2 181 46.4
Lj3g0021891 Lotus japonicus HOM05D007501 ORTHO05D009528 1.8e-32 143.3 186 45.2
ECA236G0060 Erigeron canadensis HOM05D007501 ORTHO05D009528 2.4e-32 142.9 159 50.3
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 4.1e-32 142.1 182 47.3
Aqoxy4G00171 Aquilegia oxysepala HOM05D007501 ORTHO05D009528 7.0e-32 141.4 162 46.3
Glyma.15G211700 Glycine max HOM05D007501 ORTHO05D009528 1.6e-31 140.2 183 47.0
PGSC0003DMG400021255 Solanum tuberosum HOM05D007501 ORTHO05D009528 1.6e-31 140.2 162 48.1
Sopen10g003430 Solanum pennellii HOM05D007501 ORTHO05D009528 2.3e-30 136.3 160 46.2
VMungo1127G2061 Vigna mungo HOM05D007501 ORTHO05D009528 2.3e-30 136.3 184 45.1
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 5.0e-30 135.2 163 46.6
DCAR_019618 Daucus carota HOM05D007501 ORTHO05D009528 6.5e-30 134.8 165 48.5
CARHR089710 Cardamine hirsuta HOM05D007501 ORTHO05D009528 1.1e-29 134.0 158 48.7
Solyc10g007490.2 Solanum lycopersicum HOM05D007501 ORTHO05D009528 1.1e-29 134.0 161 44.7
Thhalv10021658m.g Eutrema salsugineum HOM05D007501 ORTHO05D009528 3.2e-29 132.5 158 50.0
Sp3g12990 Schrenkiella parvula HOM05D007501 ORTHO05D009528 5.5e-29 131.7 160 49.4
AL3G27070 Arabidopsis lyrata HOM05D007501 ORTHO05D009528 1.2e-28 130.6 157 49.7
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 1.2e-28 130.6 184 45.1
Carub.0003s1443 Capsella rubella HOM05D007501 ORTHO05D009528 1.6e-28 130.2 155 51.0
CiPaw.12G110200 Carya illinoinensis HOM05D007501 ORTHO05D009528 2.8e-28 129.4 163 49.1
AT3G14760 Arabidopsis thaliana HOM05D007501 ORTHO05D009528 1.0e-27 127.5 157 49.7
arahy.Tifrunner.gnm1.ann1.652QPS Arachis hypogaea HOM05D007501 ORTHO05D009528 1.0e-27 127.5 170 44.1
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 1.8e-27 126.7 160 42.5
Nitab4.5_0000383g0020 Nicotiana tabacum HOM05D007501 ORTHO05D009528 4.0e-27 125.6 143 47.6
A01p39060 Brassica napus HOM05D007501 ORTHO05D009528 8.8e-27 124.4 160 46.9
SalBow8G3616 Salvia bowleyana HOM05D007501 ORTHO05D009528 3.4e-26 122.5 158 43.7
Sopen07g030380 Solanum pennellii HOM05D007501 ORTHO05D009528 3.4e-26 122.5 161 44.7
BraA01t03953Z Brassica rapa HOM05D007501 ORTHO05D009528 4.4e-26 122.1 160 46.2
C01p49690 Brassica napus HOM05D007501 ORTHO05D009528 7.5e-26 121.3 168 44.0
BolC1t04925H Brassica oleracea HOM05D007501 ORTHO05D009528 1.3e-25 120.6 160 45.6
TPR.G16483 Trifolium pratense HOM05D007501 ORTHO05D009528 3.7e-25 119.0 205 39.0
Peaxi162Scf00111g00124 Petunia axillaris HOM05D007501 ORTHO05D009528 8.3e-25 117.9 162 42.0
Psat4g135600 Pisum sativum HOM05D007501 ORTHO05D009528 1.1e-24 117.5 189 40.7
PGSC0003DMG400043590 Solanum tuberosum HOM05D007501 ORTHO05D009528 1.1e-24 117.5 161 43.5
CsaV3_4G032800 Cucumis sativus L. HOM05D007501 ORTHO05D009528 4.1e-24 115.5 157 43.3
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 9.2e-24 114.4 157 42.7
Nitab4.5_0008460g0030 Nicotiana tabacum HOM05D007501 ORTHO05D009528 1.2e-23 114.0 161 42.2
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 2.0e-23 113.2 159 44.7
Dinv26703 Davidia involucrata HOM05D007501 ORTHO05D009528 2.7e-23 112.8 142 44.4
CAN.G375.54 Capsicum annuum HOM05D007501 ORTHO05D009528 4.5e-23 112.1 161 43.5
Medtr8g042500 Medicago truncatula HOM05D007501 ORTHO05D009528 4.5e-23 112.1 192 39.1
Nitab4.5_0001140g0140 Nicotiana tabacum HOM05D007501 ORTHO05D009528 4.5e-23 112.1 161 42.2
ClCG11G017140 Citrullus lanatus HOM05D007501 ORTHO05D009528 5.9e-23 111.7 158 41.8
Aa31LG8G1980 Aethionema arabicum HOM05D007501 ORTHO05D009528 7.8e-23 111.3 157 40.8
AUR62013946 Chenopodium quinoa HOM05D007501 ORTHO05D009528 1.0e-22 110.9 162 40.1
MELO3C027342.2 Cucumis melo HOM05D007501 ORTHO05D009528 2.9e-22 109.4 157 42.0
AUR62019665 Chenopodium quinoa HOM05D007501 ORTHO05D009528 3.3e-21 105.9 161 39.1
Lalb_Chr03g0031351 Lupinus albus HOM05D007501 ORTHO05D009528 1.6e-20 103.6 162 41.4
BcaC09g48445 Brassica carinata HOM05D007501 ORTHO05D009528 2.1e-20 103.2 157 41.4
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 1.0e-19 100.9 157 38.9
Sed0021060 Sechium edule HOM05D007501 ORTHO05D009528 1.8e-16 90.1 157 36.9
EL10Ac4g08429 Beta vulgaris HOM05D007501 ORTHO05D009528 4.6e-15 85.5 97 45.4
ATR0681G022 Amborella trichopoda HOM05D007501 ORTHO05D009528 3.9e-14 82.4 100 50.0
Peaxi162Scf00069g01713 Petunia axillaris HOM05D007501 ORTHO05D009528 1.1e-13 80.9 103 43.7
Zm00001eb055040 Zea mays HOM05D007501 ORTHO05D009528 1.7e-09 67.0 38 73.7
Os02g0320600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 2.2e-09 66.6 43 67.4
Zm00001eb100670 Zea mays HOM05D007501 ORTHO05D009528 3.7e-09 65.9 58 44.8
SEGI_41065 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 1.1e-08 64.3 96 37.5
Zm00001eb314570 Zea mays HOM05D007501 ORTHO05D009528 1.1e-08 64.3 42 59.5
Os02g0321600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 1.9e-08 63.5 37 64.9
Pp3c23_15940 Physcomitrium patens HOM05D035914 ORTHO05D050329 9.2e-08 61.2 114 35.1
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 2.0e-07 60.1 46 52.2
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 3.5e-07 59.3 46 52.2
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 3.5e-07 59.3 46 52.2
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 1.0e-06 57.8 107 34.6
SEGI_16996 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 1.0e-06 57.8 34 70.6
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 1.3e-06 57.4 40 57.5
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 1.7e-06 57.0 50 48.0
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 3.0e-06 56.2 113 31.0
Potri.010G130600 Populus trichocarpa HOM05D002803 ORTHO05D003089 5.0e-06 55.5 88 34.1
MD13G1047600 Malus domestica HOM05D002803 ORTHO05D003089 6.6e-06 55.1 34 67.6
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 8.6e-06 54.7 50 44.0


User provided reference genes

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