Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01300 Eucalyptus grandis HOM05D004150 ORTHO05D005087 1.8e-284 981.9 480 100.0
PGR083G0816 Punica granatum HOM05D004150 ORTHO05D005087 7.6e-235 817.0 481 82.5
Cfa019528 Carpinus fangiana HOM05D004150 ORTHO05D005087 2.6e-219 765.4 480 77.3
Hma1.2p1_2701F.1_g327060 Hydrangea macrophylla HOM05D004150 ORTHO05D005087 1.6e-216 756.1 480 75.8
CiPaw.11G157600 Carya illinoinensis HOM05D004150 ORTHO05D005087 3.3e-214 748.4 480 76.2
CANSAT56G2087 Cannabis sativa HOM05D004150 ORTHO05D005087 7.4e-214 747.3 482 76.1
GSVIVG01014152001 Vitis vinifera HOM05D004150 ORTHO05D005087 8.2e-213 743.8 480 75.4
CSS0001873 Camellia sinensis var. sinensis HOM05D004150 ORTHO05D005087 1.8e-212 742.7 480 74.4
MD03G1246300 Malus domestica HOM05D004150 ORTHO05D005087 1.7e-210 736.1 480 73.3
Manes.03G091700 Manihot esculenta HOM05D004150 ORTHO05D005087 2.5e-209 732.3 484 75.0
COL.COLO4_17523 Corchorus olitorius HOM05D004150 ORTHO05D005087 3.2e-209 731.9 483 74.1
Potri.003G026500 Populus trichocarpa HOM05D004150 ORTHO05D005087 1.6e-208 729.6 484 73.3
Thecc.07G119700 Theobroma cacao HOM05D004150 ORTHO05D005087 2.7e-208 728.8 483 73.3
VMungo1080G1533 Vigna mungo HOM05D004150 ORTHO05D005087 6.7e-207 724.2 486 73.3
MD11G1267300 Malus domestica HOM05D004150 ORTHO05D005087 1.1e-206 723.4 480 72.3
Glyma.13G266400 Glycine max HOM05D004150 ORTHO05D005087 1.7e-205 719.5 483 73.5
TWI38G0344 Tripterygium wilfordii HOM05D004150 ORTHO05D005087 3.7e-205 718.4 486 72.0
Atru.chr2.2029 Acer truncatum HOM05D004150 ORTHO05D005087 1.8e-204 716.1 485 74.4
Gorai.002G053300 Gossypium raimondii HOM05D004150 ORTHO05D005087 2.4e-204 715.7 481 72.8
Potri.011G106600 Populus trichocarpa HOM05D004150 ORTHO05D005087 7.0e-204 714.1 486 72.4
Phvul.005G079200 Phaseolus vulgaris HOM05D004150 ORTHO05D005087 1.2e-203 713.4 487 72.9
Atru.chr2.2041 Acer truncatum HOM05D004150 ORTHO05D005087 1.6e-203 713.0 485 74.2
CSS0042666 Camellia sinensis var. sinensis HOM05D004150 ORTHO05D005087 2.0e-203 712.6 483 71.4
Gohir.A01G052900 Gossypium hirsutum HOM05D004150 ORTHO05D005087 2.6e-203 712.2 480 72.1
Gohir.D01G042500 Gossypium hirsutum HOM05D004150 ORTHO05D005087 2.6e-203 712.2 481 72.6
Manes.15G097400 Manihot esculenta HOM05D004150 ORTHO05D005087 5.9e-203 711.1 483 72.0
Psat5g234480 Pisum sativum HOM05D004150 ORTHO05D005087 1.3e-202 709.9 486 71.8
RcHm_v2.0_Chr5g0030011 Rosa chinensis HOM05D004150 ORTHO05D005087 2.2e-202 709.1 480 72.9
Glyma.12G231700 Glycine max HOM05D004150 ORTHO05D005087 6.5e-202 707.6 485 72.8
Cc05_g10890 Coffea canephora HOM05D004150 ORTHO05D005087 1.2e-200 703.4 480 71.0
TWI39G0561 Tripterygium wilfordii HOM05D004150 ORTHO05D005087 1.6e-200 703.0 482 70.5
Ca_03941_v3 Cicer arietinum L. HOM05D004150 ORTHO05D005087 1.0e-199 700.3 484 71.1
Medtr2g075340 Medicago truncatula HOM05D004150 ORTHO05D005087 1.8e-199 699.5 480 70.4
Ciclev10019972m.g Citrus clementina HOM05D004150 ORTHO05D005087 2.3e-199 699.1 488 71.9
Solyc07g062250.3 Solanum lycopersicum HOM05D004150 ORTHO05D005087 4.0e-199 698.4 525 65.0
FAN21G0088 Fragaria x ananassa HOM05D004150 ORTHO05D005087 6.8e-199 697.6 481 71.7
FvH4_3g17970 Fragaria vesca HOM05D004150 ORTHO05D005087 2.6e-198 695.7 482 72.0
Gohir.A13G149900 Gossypium hirsutum HOM05D004150 ORTHO05D005087 3.4e-198 695.3 483 70.8
Nn6g34456 Nelumbo nucifera HOM05D004150 ORTHO05D005087 3.4e-198 695.3 480 70.4
Sc03g0010640 Simmondsia chinensis HOM05D004150 ORTHO05D005087 3.4e-198 695.3 484 69.6
PGSC0003DMG400007094 Solanum tuberosum HOM05D004150 ORTHO05D005087 7.5e-198 694.1 523 64.4
Sopen07g030520 Solanum pennellii HOM05D004150 ORTHO05D005087 9.7e-198 693.7 525 64.4
CsaV3_4G032910 Cucumis sativus L. HOM05D004150 ORTHO05D005087 2.2e-197 692.6 478 71.1
CAN.G375.32 Capsicum annuum HOM05D004150 ORTHO05D005087 1.8e-196 689.5 524 64.1
MBI06_g16571_MAGBIO Magnolia biondii HOM05D004150 ORTHO05D005087 1.8e-196 689.5 488 69.5
Lj1A826G61 Lonicera japonica HOM05D004150 ORTHO05D005087 1.2e-195 686.8 486 67.9
THA.LOC104815577 Tarenaya hassleriana HOM05D004150 ORTHO05D005087 2.0e-195 686.0 482 70.5
Lsat_1_v5_gn_9_100501 Lactuca sativa HOM05D004150 ORTHO05D005087 8.5e-194 680.6 484 69.0
Lj3g0004524 Lotus japonicus HOM05D004150 ORTHO05D005087 8.5e-194 680.6 491 70.7
Sabra16G0254300 Salix brachista HOM05D004150 ORTHO05D005087 1.5e-193 679.9 533 65.1
MELO3C025660.2 Cucumis melo HOM05D004150 ORTHO05D005087 1.9e-193 679.5 490 68.8
ClCG11G017260 Citrullus lanatus HOM05D004150 ORTHO05D005087 4.2e-193 678.3 547 62.9
Lalb_Chr19g0133751 Lupinus albus HOM05D004150 ORTHO05D005087 7.2e-193 677.6 482 69.7
FAN25G1025 Fragaria x ananassa HOM05D004150 ORTHO05D005087 9.4e-193 677.2 520 66.9
Oeu010027.3 Olea europaea HOM05D004150 ORTHO05D005087 8.0e-192 674.1 505 65.5
Oeu058459.1 Olea europaea HOM05D004150 ORTHO05D005087 8.0e-192 674.1 481 67.4
PSO170G1443 Papaver somniferum HOM05D004150 ORTHO05D005087 8.0e-192 674.1 482 67.0
EL10Ac4g08396 Beta vulgaris HOM05D004150 ORTHO05D005087 1.4e-191 673.3 482 66.2
Nitab4.5_0000347g0180 Nicotiana tabacum HOM05D004150 ORTHO05D005087 3.0e-191 672.2 523 62.7
Lalb_Chr25g0285681 Lupinus albus HOM05D004150 ORTHO05D005087 1.5e-190 669.8 482 69.3
THA.LOC104810428 Tarenaya hassleriana HOM05D004150 ORTHO05D005087 1.5e-190 669.8 482 68.9
FAN11G2611 Fragaria x ananassa HOM05D004150 ORTHO05D005087 2.6e-190 669.1 501 68.5
FAN16G0401 Fragaria x ananassa HOM05D004150 ORTHO05D005087 2.6e-190 669.1 518 66.2
Peaxi162Scf00111g01477 Petunia axillaris HOM05D004150 ORTHO05D005087 2.6e-190 669.1 523 62.3
PSO782G0021 Papaver somniferum HOM05D004150 ORTHO05D005087 4.4e-190 668.3 482 66.6
Aqoxy1G01964 Aquilegia oxysepala HOM05D004150 ORTHO05D005087 2.8e-189 665.6 480 67.3
HanXRQChr10g0305531 Helianthus annuus HOM05D004150 ORTHO05D005087 4.2e-185 651.7 485 65.2
SGA_v2.0_scaffold130G34274 Striga asiatica HOM05D004150 ORTHO05D005087 9.5e-185 650.6 507 63.3
MSTRG.14976 Avicennia marina HOM05D004150 ORTHO05D005087 1.6e-184 649.8 481 65.1
TPR.G13030 Trifolium pratense HOM05D004150 ORTHO05D005087 2.8e-184 649.0 485 67.0
Lalb_Chr03g0031251 Lupinus albus HOM05D004150 ORTHO05D005087 3.4e-182 642.1 482 66.8
TAR629G2423 Trochodendron aralioides HOM05D004150 ORTHO05D005087 1.3e-181 640.2 442 70.4
Aa31LG8G2040 Aethionema arabicum HOM05D004150 ORTHO05D005087 1.7e-181 639.8 482 65.4
Gohir.D13G154200 Gossypium hirsutum HOM05D004150 ORTHO05D005087 2.8e-181 639.0 442 70.8
AL3G27140 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 3.7e-181 638.6 484 66.1
HanXRQChr17g0556791 Helianthus annuus HOM05D004150 ORTHO05D005087 4.9e-181 638.3 480 64.8
vmacro09408 Vaccinium macrocarpon HOM05D004150 ORTHO05D005087 4.9e-181 638.3 488 65.0
AT3G14830 Arabidopsis thaliana HOM05D004150 ORTHO05D005087 1.8e-180 636.3 485 65.4
Actinidia21439 Actinidia chinensis HOM05D004150 ORTHO05D005087 1.2e-179 633.6 482 65.4
Rhsim04G0036400 Rhododendron simsii HOM05D004150 ORTHO05D005087 2.0e-179 632.9 486 64.8
Sed0003063 Sechium edule HOM05D004150 ORTHO05D005087 2.0e-179 632.9 441 71.0
Rhsim04G0035400 Rhododendron simsii HOM05D004150 ORTHO05D005087 2.9e-178 629.0 486 64.4
ECA234G0958 Erigeron canadensis HOM05D004150 ORTHO05D005087 5.0e-178 628.2 483 64.0
CARHR089770 Cardamine hirsuta HOM05D004150 ORTHO05D005087 1.9e-177 626.3 482 63.9
SalBow7G0391 Salvia bowleyana HOM05D004150 ORTHO05D005087 3.6e-176 622.1 481 64.2
Actinidia12595 Actinidia chinensis HOM05D004150 ORTHO05D005087 2.3e-175 619.4 547 58.3
Thhalv10011465m.g Eutrema salsugineum HOM05D004150 ORTHO05D005087 5.2e-175 618.2 485 63.3
AUR62019617 Chenopodium quinoa HOM05D004150 ORTHO05D005087 6.8e-175 617.8 484 63.2
Sp1g39990 Schrenkiella parvula HOM05D004150 ORTHO05D005087 1.2e-174 617.1 480 63.5
AUR62039606 Chenopodium quinoa HOM05D004150 ORTHO05D005087 1.5e-174 616.7 482 62.7
Ah.04g164080 Amaranthus hybridus HOM05D004150 ORTHO05D005087 3.4e-174 615.5 480 62.5
Gorai.013G174200 Gossypium raimondii HOM05D004150 ORTHO05D005087 2.2e-173 612.8 494 63.4
Carub.0003s1449 Capsella rubella HOM05D004150 ORTHO05D005087 1.9e-172 609.8 487 63.2
C05p52450 Brassica napus HOM05D004150 ORTHO05D005087 7.0e-172 607.8 484 63.6
BcaC05g29034 Brassica carinata HOM05D004150 ORTHO05D005087 1.2e-171 607.1 484 63.4
BolC5t33929H Brassica oleracea HOM05D004150 ORTHO05D005087 3.5e-171 605.5 484 63.0
Migut.H02018 Erythranthe guttata HOM05D004150 ORTHO05D005087 5.0e-170 601.7 442 65.4
Dinv15009 Davidia involucrata HOM05D004150 ORTHO05D005087 6.6e-170 601.3 393 73.8
BraA05t22282Z Brassica rapa HOM05D004150 ORTHO05D005087 3.3e-169 599.0 483 62.7
Carub.0001s4264 Capsella rubella HOM05D004150 ORTHO05D005087 3.6e-168 595.5 481 63.0
A05p34660 Brassica napus HOM05D004150 ORTHO05D005087 4.7e-168 595.1 484 62.6
CARHR043670 Cardamine hirsuta HOM05D004150 ORTHO05D005087 6.2e-168 594.7 481 62.0
BcaB06g25355 Brassica carinata HOM05D004150 ORTHO05D005087 8.0e-168 594.3 481 62.0
BcaC08g43529 Brassica carinata HOM05D004150 ORTHO05D005087 1.4e-167 593.6 483 61.5
BolC6t35999H Brassica oleracea HOM05D004150 ORTHO05D005087 1.4e-167 593.6 483 61.5
BraA06t23329Z Brassica rapa HOM05D004150 ORTHO05D005087 1.4e-167 593.6 483 61.5
ATR0127G006 Amborella trichopoda HOM05D004150 ORTHO05D005087 1.8e-167 593.2 487 61.6
A06p01010 Brassica napus HOM05D004150 ORTHO05D005087 2.3e-167 592.8 483 61.5
AT1G53450 Arabidopsis thaliana HOM05D004150 ORTHO05D005087 9.8e-166 587.4 480 61.7
BcaB07g33329 Brassica carinata HOM05D004150 ORTHO05D005087 4.9e-165 585.1 480 60.4
Prupe.4G158300 Prunus persica HOM05D004150 ORTHO05D005087 4.9e-165 585.1 401 70.3
Dinv18386 Davidia involucrata HOM05D004150 ORTHO05D005087 5.4e-164 581.6 393 72.0
C06p09220 Brassica napus HOM05D004150 ORTHO05D005087 9.2e-164 580.9 483 60.5
TAR627G0919 Trochodendron aralioides HOM05D004150 ORTHO05D005087 2.5e-161 572.8 397 71.5
Potri.001G386700 Populus trichocarpa HOM05D004150 ORTHO05D005087 1.6e-160 570.1 397 70.8
Duzib213G1096 Durio zibethinus HOM05D004150 ORTHO05D005087 4.9e-157 558.5 441 64.6
Os01g0729900 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 2.3e-154 549.7 494 55.3
Zm00001eb154220 Zea mays HOM05D004150 ORTHO05D005087 5.6e-153 545.0 500 55.0
ECA240G3777 Erigeron canadensis HOM05D004150 ORTHO05D005087 4.4e-150 535.4 397 65.5
Hund10457 Selenicereus undatus HOM05D004150 ORTHO05D005087 3.8e-149 532.3 442 60.9
QL08p025853 Quercus lobata HOM05D004150 ORTHO05D005087 1.9e-148 530.0 290 84.1
CiPaw.12G111300 Carya illinoinensis HOM05D004150 ORTHO05D005087 3.2e-148 529.3 357 73.4
Os05g0530300 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 1.0e-146 524.2 508 52.8
Sabra11G0094900 Salix brachista HOM05D004150 ORTHO05D005087 5.1e-146 521.9 442 61.8
CDE06G0863 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 6.4e-141 505.0 464 55.8
HPP92_005189 Vanilla planifolia HOM05D004150 ORTHO05D005087 3.2e-140 502.7 441 57.1
Cpa.g.sc77.46 Carica papaya HOM05D004150 ORTHO05D005087 9.3e-140 501.1 283 79.9
Nn3g21055 Nelumbo nucifera HOM05D004150 ORTHO05D005087 1.0e-138 497.7 401 63.8
Zm00001eb361900 Zea mays HOM05D004150 ORTHO05D005087 9.6e-137 491.1 457 54.9
Nitab4.5_0024430g0010 Nicotiana tabacum HOM05D004150 ORTHO05D005087 4.8e-136 488.8 287 76.3
AL1G61960 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 1.6e-131 473.8 340 65.6
unitig_21.g20061 Utricularia gibba HOM05D004150 ORTHO05D005087 6.7e-130 468.4 482 50.4
DCAR_013267 Daucus carota HOM05D004150 ORTHO05D005087 2.1e-120 436.8 288 67.7
AagrBONN_evm.TU.Sc2ySwM_362.2802 Anthoceros agrestis HOM05D004150 ORTHO05D005087 1.7e-117 427.2 530 45.7
Os06g0152800 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 2.9e-117 426.4 383 55.1
SMO169G0186 Selaginella moellendorffii HOM05D004150 ORTHO05D005087 5.1e-114 415.6 287 66.2
Mapoly0001s0101 Marchantia polymorpha HOM05D004150 ORTHO05D005087 4.5e-110 402.5 290 66.2
Zm00001eb271010 Zea mays HOM05D004150 ORTHO05D005087 2.4e-103 380.2 304 58.9
SEGI_28417 Sequoiadendron giganteum HOM05D004150 ORTHO05D005087 4.5e-102 375.9 481 42.2
Pp3c9_8060 Physcomitrium patens HOM05D004150 ORTHO05D005087 6.5e-101 372.1 539 42.3
CDE02G2021 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 1.8e-98 364.0 306 59.8
Hma1.2p1_1650F.1_g295710 Hydrangea macrophylla HOM05D004150 ORTHO05D005087 2.4e-95 353.6 301 64.5
Zm00001eb293260 Zea mays HOM05D004150 ORTHO05D005087 1.2e-86 324.7 380 48.2
Mapoly0030s0045 Marchantia polymorpha HOM05D004150 ORTHO05D005087 2.5e-68 263.8 439 41.2
Haze_09270 Corylus avellana HOM05D004150 ORTHO05D005087 1.8e-66 257.7 205 61.5
Haze_09266 Corylus avellana HOM05D004150 ORTHO05D005087 1.3e-61 241.5 193 66.8
Gorai.010G164000 Gossypium raimondii HOM05D004150 ORTHO05D005087 1.6e-51 208.0 179 58.1
QL08p025867 Quercus lobata HOM05D004150 ORTHO05D005087 9.2e-47 192.2 194 55.7
Gohir.D04G018433 Gossypium hirsutum HOM05D004150 ORTHO05D005087 2.4e-39 167.5 95 77.9
Gorai.001G168800 Gossypium raimondii HOM05D004150 ORTHO05D005087 9.2e-39 165.6 92 79.3
Haze_09267 Corylus avellana HOM05D004150 ORTHO05D005087 2.7e-38 164.1 144 56.2
Haze_09268 Corylus avellana HOM05D004150 ORTHO05D005087 2.7e-38 164.1 144 56.2
Gohir.A02G079101 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.3e-37 161.8 161 55.9
Gohir.A11G228702 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.7e-37 161.4 92 77.2
CDE09G0238 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 5.6e-36 156.4 127 52.8
EL10Ac9g22809 Beta vulgaris HOM05D004150 ORTHO05D005087 1.1e-34 152.1 194 45.4
arahy.Tifrunner.gnm1.ann1.H8RDCT Arachis hypogaea HOM05D004150 ORTHO05D005087 5.2e-34 149.8 87 80.5
arahy.Tifrunner.gnm1.ann1.R67SZW Arachis hypogaea HOM05D004150 ORTHO05D005087 5.2e-34 149.8 87 80.5
AL1G62010 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 5.8e-33 146.4 128 62.5
VMungo1309G1261 Vigna mungo HOM05D004150 ORTHO05D005087 9.9e-33 145.6 113 66.4
Haze_11864 Corylus avellana HOM05D004150 ORTHO05D005087 6.0e-30 136.3 158 50.6
Actinidia33318 Actinidia chinensis HOM05D004150 ORTHO05D005087 2.5e-28 131.0 182 43.4
BolC5t30531H Brassica oleracea HOM05D004150 ORTHO05D032065 2.6e-25 120.9 163 42.9
Aqoxy1G01962 Aquilegia oxysepala HOM05D004150 ORTHO05D005087 2.2e-24 117.9 141 48.2
VMungo0251G3124 Vigna mungo HOM05D004150 ORTHO05D005087 4.2e-15 87.0 76 60.5
ECA240G1314 Erigeron canadensis HOM05D000062 ORTHO05D000043 7.4e-12 76.3 45 71.1


User provided reference genes

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