Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01249 Eucalyptus grandis HOM05D005007 ORTHO05D006053 1.2e-52 209.5 105 100.0
Gohir.D01G042700 Gossypium hirsutum HOM05D005007 ORTHO05D006053 2.8e-25 118.6 107 60.7
Gorai.002G053600 Gossypium raimondii HOM05D005007 ORTHO05D006053 3.7e-25 118.2 107 60.7
Gohir.A01G053200 Gossypium hirsutum HOM05D005007 ORTHO05D006053 7.0e-24 114.0 104 58.7
Thecc.07G118400 Theobroma cacao HOM05D005007 ORTHO05D006053 4.5e-23 111.3 104 61.5
Prupe.4G161500 Prunus persica HOM05D005007 ORTHO05D006053 5.9e-23 110.9 111 55.0
RcHm_v2.0_Chr5g0030711 Rosa chinensis HOM05D005007 ORTHO05D006053 2.2e-22 109.0 113 57.5
CiPaw.12G113100 Carya illinoinensis HOM05D005007 ORTHO05D006053 3.2e-21 105.1 104 58.7
Atru.chr2.2102 Acer truncatum HOM05D005007 ORTHO05D006053 2.7e-20 102.1 94 56.4
Cpa.g.sc77.26 Carica papaya HOM05D005007 ORTHO05D006053 6.1e-20 100.9 96 59.4
QL08p025919 Quercus lobata HOM05D005007 ORTHO05D006053 8.0e-20 100.5 100 58.0
COL.COLO4_17528 Corchorus olitorius HOM05D005007 ORTHO05D006053 1.8e-19 99.4 100 56.0
Glyma.12G156400 Glycine max HOM05D005007 ORTHO05D006053 1.8e-19 99.4 106 55.7
MD11G1264800 Malus domestica HOM05D005007 ORTHO05D006053 4.0e-19 98.2 100 58.0
Lalb_Chr03g0031211 Lupinus albus HOM05D005007 ORTHO05D006053 6.8e-19 97.4 107 54.2
Phvul.011G165600 Phaseolus vulgaris HOM05D005007 ORTHO05D006053 2.0e-18 95.9 103 53.4
Sc16g0007670 Simmondsia chinensis HOM05D005007 ORTHO05D006053 2.6e-18 95.5 94 52.1
Ciclev10022947m.g Citrus clementina HOM05D005007 ORTHO05D006053 4.4e-18 94.7 83 63.9
Rhsim06G0209000 Rhododendron simsii HOM05D005007 ORTHO05D006053 4.4e-18 94.7 86 55.8
Sabra16G0257800 Salix brachista HOM05D005007 ORTHO05D006053 2.2e-17 92.4 85 58.8
CiPaw.11G159400 Carya illinoinensis HOM05D005007 ORTHO05D006053 2.8e-17 92.0 103 59.2
Glyma.06G227850 Glycine max HOM05D005007 ORTHO05D006053 2.8e-17 92.0 105 49.5
Glyma.06G227900 Glycine max HOM05D005007 ORTHO05D006053 2.8e-17 92.0 105 49.5
GSVIVG01021255001 Vitis vinifera HOM05D005007 ORTHO05D006053 3.7e-17 91.7 102 54.9
Manes.15G095801 Manihot esculenta HOM05D005007 ORTHO05D006053 4.8e-17 91.3 110 50.9
Nn3g21105 Nelumbo nucifera HOM05D005007 ORTHO05D006053 8.3e-17 90.5 105 52.4
vmacro11948 Vaccinium macrocarpon HOM05D005007 ORTHO05D006053 1.4e-16 89.7 85 56.5
Actinidia35210 Actinidia chinensis HOM05D005007 ORTHO05D006053 1.8e-16 89.4 104 49.0
Haze_09314 Corylus avellana HOM05D005007 ORTHO05D006053 1.8e-16 89.4 103 54.4
SalBow7G2341 Salvia bowleyana HOM05D005007 ORTHO05D006053 1.8e-16 89.4 89 52.8
TWI39G0558 Tripterygium wilfordii HOM05D005007 ORTHO05D006053 1.8e-16 89.4 88 62.5
CANSAT35G0905 Cannabis sativa HOM05D005007 ORTHO05D006053 3.1e-16 88.6 81 55.6
ClCG07G010220 Citrullus lanatus HOM05D005007 ORTHO05D006053 5.4e-16 87.8 91 57.1
Potri.001G393001 Populus trichocarpa HOM05D005007 ORTHO05D006053 7.0e-16 87.4 104 51.9
EL10Ac4g08365 Beta vulgaris HOM05D005007 ORTHO05D006053 9.1e-16 87.0 96 51.0
CsaV3_4G008110 Cucumis sativus L. HOM05D005007 ORTHO05D006053 1.2e-15 86.7 94 52.1
Sed0025620 Sechium edule HOM05D005007 ORTHO05D006053 2.0e-15 85.9 106 50.0
VMungo1127G1862 Vigna mungo HOM05D005007 ORTHO05D006053 3.5e-15 85.1 106 50.0
Lalb_Chr01g0006861 Lupinus albus HOM05D005007 ORTHO05D006053 7.7e-15 84.0 104 48.1
Manes.16G043000 Manihot esculenta HOM05D005007 ORTHO05D006053 1.0e-14 83.6 106 46.2
Potri.011G070400 Populus trichocarpa HOM05D005007 ORTHO05D006053 1.0e-14 83.6 110 46.4
Potri.011G108700 Populus trichocarpa HOM05D005007 ORTHO05D006053 1.0e-14 83.6 93 55.9
TWI09G0208 Tripterygium wilfordii HOM05D005007 ORTHO05D006053 1.0e-14 83.6 103 48.5
MD10G1275600 Malus domestica HOM05D005007 ORTHO05D006053 2.2e-14 82.4 111 48.6
Potri.001G389150 Populus trichocarpa HOM05D005007 ORTHO05D006053 2.9e-14 82.0 96 52.1
Duzib160G0236 Durio zibethinus HOM05D005007 ORTHO05D006053 3.8e-14 81.6 83 55.4
TPR.G6805 Trifolium pratense HOM05D000213 ORTHO05D000426 3.8e-14 81.6 74 58.1
Actinidia39520 Actinidia chinensis HOM05D005007 ORTHO05D006053 5.0e-14 81.3 88 52.3
arahy.Tifrunner.gnm1.ann1.HJBU6U Arachis hypogaea HOM05D005007 ORTHO05D006053 5.0e-14 81.3 95 50.5
Migut.H01413 Erythranthe guttata HOM05D005007 ORTHO05D006053 6.5e-14 80.9 104 46.2
arahy.Tifrunner.gnm1.ann1.VZS9XU Arachis hypogaea HOM05D005007 ORTHO05D006053 8.5e-14 80.5 100 50.0
Potri.004G061100 Populus trichocarpa HOM05D005007 ORTHO05D006053 8.5e-14 80.5 90 52.2
CsaV3_6G051040 Cucumis sativus L. HOM05D005007 ORTHO05D006053 1.1e-13 80.1 89 48.3
Sabra11G0096200 Salix brachista HOM05D005007 ORTHO05D006053 1.1e-13 80.1 89 55.1
Ciclev10017907m.g Citrus clementina HOM05D005007 ORTHO05D006053 1.9e-13 79.3 67 56.7
MELO3C007199.2 Cucumis melo HOM05D005007 ORTHO05D006053 1.9e-13 79.3 89 48.3
Sabra04G0040400 Salix brachista HOM05D005007 ORTHO05D006053 1.9e-13 79.3 95 48.4
arahy.Tifrunner.gnm1.ann1.G1B0F8 Arachis hypogaea HOM05D005007 ORTHO05D006053 2.5e-13 79.0 83 49.4
Dinv12754 Davidia involucrata HOM05D005007 ORTHO05D006053 2.5e-13 79.0 105 46.7
Thecc.06G165800 Theobroma cacao HOM05D005007 ORTHO05D006053 2.5e-13 79.0 102 52.0
Oeu060171.1 Olea europaea HOM05D005007 ORTHO05D006053 3.2e-13 78.6 103 44.7
PGR042G3787 Punica granatum HOM05D005007 ORTHO05D006053 3.2e-13 78.6 83 50.6
Dinv32340 Davidia involucrata HOM05D005007 ORTHO05D006053 4.2e-13 78.2 100 49.0
Duzib192G0425 Durio zibethinus HOM05D005007 ORTHO05D006053 4.2e-13 78.2 84 51.2
Glyma.08G118300 Glycine max HOM05D005007 ORTHO05D006053 4.2e-13 78.2 83 51.8
Sabra11G0055100 Salix brachista HOM05D005007 ORTHO05D006053 5.5e-13 77.8 92 50.0
SalBow8G4395 Salvia bowleyana HOM05D005007 ORTHO05D006053 5.5e-13 77.8 82 47.6
Glyma.05G160900 Glycine max HOM05D005007 ORTHO05D006053 7.2e-13 77.4 83 54.2
COL.COLO4_31238 Corchorus olitorius HOM05D005007 ORTHO05D006053 9.5e-13 77.0 105 46.7
MBI06_g18688_MAGBIO Magnolia biondii HOM05D005007 ORTHO05D006053 9.5e-13 77.0 89 46.1
MD00G1009400 Malus domestica HOM05D005007 ORTHO05D006053 9.5e-13 77.0 109 49.5
MD05G1295500 Malus domestica HOM05D005007 ORTHO05D006053 9.5e-13 77.0 109 49.5
Actinidia18804 Actinidia chinensis HOM05D005007 ORTHO05D006053 1.2e-12 76.6 69 56.5
Medtr8g087320 Medicago truncatula HOM05D005007 ORTHO05D006053 1.2e-12 76.6 73 53.4
Atru.chr10.1572 Acer truncatum HOM05D005007 ORTHO05D006053 1.6e-12 76.3 107 43.9
Lalb_Chr13g0295281 Lupinus albus HOM05D005007 ORTHO05D006053 1.6e-12 76.3 98 50.0
Manes.17G059100 Manihot esculenta HOM05D005007 ORTHO05D006053 1.6e-12 76.3 99 44.4
Phvul.002G241000 Phaseolus vulgaris HOM05D005007 ORTHO05D006053 1.6e-12 76.3 81 48.1
Actinidia35601 Actinidia chinensis HOM05D005007 ORTHO05D006053 2.1e-12 75.9 100 44.0
Sabra11G0058300 Salix brachista HOM05D005007 ORTHO05D006053 2.1e-12 75.9 73 54.8
Aqoxy4G00249 Aquilegia oxysepala HOM05D005007 ORTHO05D006053 2.7e-12 75.5 73 54.8
Migut.H01416 Erythranthe guttata HOM05D005007 ORTHO05D006053 2.7e-12 75.5 93 47.3
Ca_17898_v3 Cicer arietinum L. HOM05D005007 ORTHO05D006053 4.7e-12 74.7 74 54.1
Sed0011988 Sechium edule HOM05D005007 ORTHO05D006053 4.7e-12 74.7 104 45.2
Gohir.A06G133600 Gossypium hirsutum HOM05D005007 ORTHO05D006053 6.1e-12 74.3 102 45.1
Gohir.D06G138700 Gossypium hirsutum HOM05D005007 ORTHO05D006053 6.1e-12 74.3 102 45.1
Lsat_1_v5_gn_7_25701 Lactuca sativa HOM05D005007 ORTHO05D006053 6.1e-12 74.3 79 53.2
Prupe.4G066600 Prunus persica HOM05D005007 ORTHO05D006053 6.1e-12 74.3 75 54.7
Sed0017213 Sechium edule HOM05D005007 ORTHO05D006053 6.1e-12 74.3 92 42.4
Gorai.010G161300 Gossypium raimondii HOM05D005007 ORTHO05D006053 8.0e-12 73.9 102 45.1
ClCG01G023890 Citrullus lanatus HOM05D005007 ORTHO05D006053 1.0e-11 73.6 99 47.5
Psat7g068680 Pisum sativum HOM05D005007 ORTHO05D006053 1.0e-11 73.6 74 52.7
QL05p049974 Quercus lobata HOM05D005007 ORTHO05D006053 1.0e-11 73.6 70 54.3
Haze_05357 Corylus avellana HOM05D005007 ORTHO05D006053 1.4e-11 73.2 80 42.5
FvH4_3g07320 Fragaria vesca HOM05D005007 ORTHO05D006053 1.4e-11 73.2 105 44.8
FAN11G0120 Fragaria x ananassa HOM05D005007 ORTHO05D006053 1.4e-11 73.2 105 44.8
Peaxi162Scf00202g00119 Petunia axillaris HOM05D005007 ORTHO05D006053 1.8e-11 72.8 93 47.3
RcHm_v2.0_Chr5g0011631 Rosa chinensis HOM05D005007 ORTHO05D006053 2.3e-11 72.4 82 47.6
CSS0021075 Camellia sinensis var. sinensis HOM05D005007 ORTHO05D006053 3.0e-11 72.0 96 43.8
Ah.14g087010 Amaranthus hybridus HOM05D005007 ORTHO05D006053 4.0e-11 71.6 102 46.1
CiPaw.09G137100 Carya illinoinensis HOM05D005007 ORTHO05D006053 4.0e-11 71.6 95 45.3
AUR62039477 Chenopodium quinoa HOM05D005007 ORTHO05D006053 4.0e-11 71.6 83 50.6
Migut.M00716 Erythranthe guttata HOM05D005007 ORTHO05D006053 4.0e-11 71.6 100 42.0
Rhsim02G0146700 Rhododendron simsii HOM05D005007 ORTHO05D006053 4.0e-11 71.6 80 50.0
HanXRQChr02g0038411 Helianthus annuus HOM05D005007 ORTHO05D006053 5.2e-11 71.2 93 43.0
FAN25G2704 Fragaria x ananassa HOM05D005007 ORTHO05D006053 8.8e-11 70.5 100 44.0
Oeu039881.1 Olea europaea HOM05D005007 ORTHO05D006053 8.8e-11 70.5 102 43.1
CDE10G0299 Ceratophyllum demersum HOM05D005007 ORTHO05D006053 1.2e-10 70.1 91 40.7
Hma1.2p1_0934F.1_g238510 Hydrangea macrophylla HOM05D005007 ORTHO05D006053 1.2e-10 70.1 94 42.6
DCAR_003989 Daucus carota HOM05D005007 ORTHO05D006053 1.5e-10 69.7 84 46.4
Duzib235G0435 Durio zibethinus HOM05D005007 ORTHO05D006053 1.5e-10 69.7 99 45.5
PGSC0003DMG400044408 Solanum tuberosum HOM05D005007 ORTHO05D006053 1.5e-10 69.7 82 48.8
Cpa.g.sc7.108 Carica papaya HOM05D005007 ORTHO05D006053 2.0e-10 69.3 105 38.1
Lsat_1_v5_gn_5_126541 Lactuca sativa HOM05D005007 ORTHO05D006053 2.0e-10 69.3 101 43.6
Gohir.A05G153450 Gossypium hirsutum HOM05D005007 ORTHO05D006053 3.4e-10 68.6 84 45.2
MSTRG.7429 Avicennia marina HOM05D005007 ORTHO05D006053 4.4e-10 68.2 96 44.8
Cc02_g15570 Coffea canephora HOM05D005007 ORTHO05D006053 4.4e-10 68.2 106 42.5
FAN21G0366 Fragaria x ananassa HOM05D005007 ORTHO05D006053 4.4e-10 68.2 62 58.1
Peaxi162Scf00111g01466 Petunia axillaris HOM05D005007 ORTHO05D006053 4.4e-10 68.2 68 55.9
Gohir.D05G156101 Gossypium hirsutum HOM05D005007 ORTHO05D006053 5.7e-10 67.8 72 50.0
CSS0026874 Camellia sinensis var. sinensis HOM05D005007 ORTHO05D006053 7.5e-10 67.4 64 54.7
ECA236G3784 Erigeron canadensis HOM05D005007 ORTHO05D006053 7.5e-10 67.4 81 46.9
unitig_0.g744 Utricularia gibba HOM05D005007 ORTHO05D006053 9.8e-10 67.0 85 45.9
Ah.09g233580 Amaranthus hybridus HOM05D005007 ORTHO05D006053 3.7e-09 65.1 62 51.6
FAN16G2723 Fragaria x ananassa HOM05D005007 ORTHO05D006053 4.9e-09 64.7 94 43.6
CDE10G1215 Ceratophyllum demersum HOM05D005007 ORTHO05D006053 6.3e-09 64.3 48 58.3
Nitab4.5_0007471g0020 Nicotiana tabacum HOM05D005007 ORTHO05D006053 8.3e-09 63.9 98 44.9
DCAR_007938 Daucus carota HOM05D005007 ORTHO05D006053 1.1e-08 63.5 78 47.4
ATR0012G015 Amborella trichopoda HOM05D005007 ORTHO05D006053 1.8e-08 62.8 88 37.5
Nitab4.5_0000437g0140 Nicotiana tabacum HOM05D005007 ORTHO05D006053 1.8e-08 62.8 98 44.9
PGSC0003DMG400028468 Solanum tuberosum HOM05D005007 ORTHO05D006053 1.8e-08 62.8 98 44.9
Solyc02g072170.3 Solanum lycopersicum HOM05D005007 ORTHO05D006053 1.2e-07 60.1 101 41.6
Sopen02g021150 Solanum pennellii HOM05D005007 ORTHO05D006053 1.2e-07 60.1 101 41.6
HPP92_008753 Vanilla planifolia HOM05D005007 ORTHO05D006053 2.7e-07 58.9 94 41.5
DCAR_005144 Daucus carota HOM05D005007 ORTHO05D006053 3.5e-07 58.5 102 40.2
C03p81500 Brassica napus HOM05D005007 ORTHO05D006053 4.5e-07 58.2 59 44.1
BolC3t20421H Brassica oleracea HOM05D005007 ORTHO05D006053 4.5e-07 58.2 59 44.1
BcaB04g18501 Brassica carinata HOM05D005007 ORTHO05D006053 1.0e-06 57.0 85 37.6
BraA08t33391Z Brassica rapa HOM05D005007 ORTHO05D006053 1.0e-06 57.0 67 43.3
SGA_v2.0_scaffold181G39748 Striga asiatica HOM05D002453 ORTHO05D008746 1.0e-06 57.0 42 54.8
Eucgr.D00467 Eucalyptus grandis HOM05D005007 ORTHO05D006053 1.7e-06 56.2 51 49.0
Thhalv10027446m.g Eutrema salsugineum HOM05D005007 ORTHO05D006053 2.3e-06 55.8 66 39.4
Nn6g34499 Nelumbo nucifera HOM05D005007 ORTHO05D006053 2.3e-06 55.8 49 59.2
Carub.0007s2243 Capsella rubella HOM05D005007 ORTHO05D006053 2.9e-06 55.5 67 43.3
Actinidia16774 Actinidia chinensis HOM05D005007 ORTHO05D006053 3.8e-06 55.1 61 42.6
CARHR225660 Cardamine hirsuta HOM05D005007 ORTHO05D006053 5.0e-06 54.7 54 42.6
Sp7g17510 Schrenkiella parvula HOM05D005007 ORTHO05D006053 5.0e-06 54.7 66 40.9
Os06g0551500 Oryza sativa ssp. japonica HOM05D005007 ORTHO05D006053 6.6e-06 54.3 58 50.0


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