Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 3.5e-289 997.7 532 100.0
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 5.8e-252 874.0 533 90.1
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.8e-240 835.9 532 86.1
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 3.5e-204 715.3 525 71.0
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 6.5e-203 711.1 527 71.7
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 1.1e-202 710.3 533 70.9
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 1.2e-201 706.8 527 70.4
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 3.6e-201 705.3 527 69.4
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 1.3e-198 696.8 525 69.9
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.4e-197 693.3 528 70.3
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 4.1e-197 691.8 527 68.7
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 5.4e-197 691.4 527 69.3
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 1.3e-195 686.8 525 70.7
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 1.7e-195 686.4 525 69.3
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 1.7e-195 686.4 527 68.5
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 5.0e-195 684.9 531 68.7
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 1.9e-194 682.9 527 67.9
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 5.5e-194 681.4 527 68.7
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 9.5e-194 680.6 525 68.0
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 9.5e-194 680.6 527 68.9
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 5.2e-192 674.9 527 67.6
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 6.8e-192 674.5 527 68.3
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 6.8e-192 674.5 526 66.2
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 1.2e-191 673.7 525 67.2
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 1.7e-190 669.8 542 66.6
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 1.1e-189 667.2 539 65.7
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 1.1e-189 667.2 498 71.3
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 1.8e-189 666.4 527 67.6
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 3.2e-189 665.6 526 67.3
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 3.2e-189 665.6 527 66.8
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 3.2e-189 665.6 525 66.7
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 2.0e-188 662.9 524 66.8
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 2.5e-186 656.0 527 67.2
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 9.5e-186 654.1 551 64.2
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 1.2e-185 653.7 534 65.0
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 1.6e-185 653.3 527 66.0
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 3.6e-185 652.1 524 66.0
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 3.6e-185 652.1 526 65.8
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 3.6e-185 652.1 551 64.1
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 8.9e-184 647.5 539 64.7
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 3.4e-183 645.6 527 64.1
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 4.4e-183 645.2 527 64.1
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 2.2e-182 642.9 530 64.2
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 3.7e-182 642.1 527 65.1
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 3.7e-182 642.1 527 64.5
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 1.1e-181 640.6 527 64.9
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 4.1e-181 638.6 527 63.8
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 1.6e-180 636.7 525 64.6
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 2.0e-180 636.3 527 63.2
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.7e-180 636.0 541 64.5
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 6.0e-180 634.8 525 65.3
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 2.3e-179 632.9 524 64.7
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 2.3e-179 632.9 524 64.7
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 2.3e-179 632.9 525 64.8
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 5.0e-179 631.7 525 64.8
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 6.6e-179 631.3 571 60.6
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 3.3e-178 629.0 525 63.2
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 9.5e-178 627.5 529 62.6
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 3.4e-175 619.0 528 61.9
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 4.9e-174 615.1 526 62.2
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 4.1e-173 612.1 464 70.3
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 2.1e-172 609.8 564 59.8
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 1.7e-171 606.7 645 55.0
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 2.5e-170 602.8 528 60.2
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 2.9e-166 589.3 526 61.2
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 9.6e-162 574.3 521 58.2
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 2.1e-161 573.2 521 57.8
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 1.4e-160 570.5 527 62.0
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 7.6e-159 564.7 529 56.7
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 1.3e-158 563.9 521 57.0
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 2.4e-157 559.7 519 58.8
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 5.4e-157 558.5 521 57.0
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 5.4e-157 558.5 573 56.0
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 1.6e-156 557.0 519 59.3
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 2.1e-156 556.6 521 58.3
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 3.9e-155 552.4 526 58.4
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 6.6e-155 551.6 521 56.4
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 1.3e-153 547.4 464 64.7
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 1.8e-152 543.5 548 54.2
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 5.8e-151 538.5 535 54.4
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 9.9e-151 537.7 547 53.9
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 7.9e-148 528.1 532 54.9
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 1.1e-144 517.7 521 54.3
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 1.4e-141 507.3 449 61.5
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 3.2e-141 506.1 451 62.1
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 2.4e-136 490.0 423 63.8
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 5.3e-136 488.8 529 49.3
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 1.0e-134 484.6 530 49.6
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 3.0e-131 473.0 389 66.1
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 1.4e-120 437.6 401 60.6
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.3e-118 431.0 407 60.0
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 8.8e-115 418.3 555 46.3
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.1e-112 411.4 525 47.0
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 4.4e-106 389.4 330 63.9
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 1.8e-104 384.0 331 63.1
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 4.0e-91 339.7 290 61.7
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 4.0e-91 339.7 290 61.7
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 3.1e-88 330.1 378 53.2
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 1.2e-84 318.2 516 38.4
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 1.2e-79 301.6 530 37.2
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 7.7e-79 298.9 370 50.5
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 8.0e-76 288.9 524 36.3
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 6.8e-75 285.8 236 66.1
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 9.2e-72 275.4 270 58.1
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 9.2e-72 275.4 198 68.2
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 2.6e-66 257.3 260 60.0
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 3.1e-59 233.8 172 67.4
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 2.7e-55 220.7 215 55.8
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 1.0e-54 218.8 163 65.0
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 1.8e-51 208.0 229 49.3
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 4.9e-49 199.9 462 32.0
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 3.9e-38 163.7 290 37.9
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 1.3e-36 158.7 106 72.6
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 4.8e-36 156.8 113 67.3
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 2.8e-28 131.0 124 54.8
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 8.7e-22 109.4 135 43.0
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 9.6e-21 105.9 112 53.6
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 1.7e-17 95.1 101 51.5
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-11 74.3 77 48.1
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 1.1e-08 65.9 138 39.1
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 2.7e-07 61.2 51 56.9
RcHm_v2.0_Chr1g0340011 Rosa chinensis HOM05D005607 ORTHO05D008142 1.3e-06 58.9 71 52.1
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 3.9e-06 57.4 63 57.1


User provided reference genes

Program Settings