Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 3.1e-94 348.6 195 100.0
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 2.0e-56 223.0 172 73.8
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 2.9e-55 219.2 184 71.7
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 2.9e-55 219.2 182 73.1
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.9e-54 216.5 183 72.1
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 1.2e-53 213.8 182 68.1
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 2.0e-53 213.0 183 70.5
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 6.0e-53 211.5 180 70.6
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 1.0e-52 210.7 182 69.2
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 3.9e-52 208.8 178 71.3
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 6.6e-52 208.0 175 69.7
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 8.6e-52 207.6 183 67.8
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 1.5e-51 206.8 178 69.7
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.9e-51 206.5 180 70.6
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 2.5e-51 206.1 184 69.6
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 2.5e-51 206.1 179 69.8
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 2.5e-51 206.1 182 67.0
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 3.3e-51 205.7 178 68.5
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 3.3e-51 205.7 180 70.6
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 3.3e-51 205.7 180 70.6
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 9.5e-51 204.1 179 70.4
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 9.5e-51 204.1 181 66.9
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 9.5e-51 204.1 180 66.1
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 1.6e-50 203.4 180 66.7
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 2.1e-50 203.0 177 68.4
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 3.6e-50 202.2 177 68.9
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 4.7e-50 201.8 179 67.0
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 4.7e-50 201.8 179 67.0
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.4e-49 200.3 179 67.0
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 2.3e-49 199.5 145 76.6
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 6.8e-49 198.0 185 65.4
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 8.9e-49 197.6 181 65.2
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 8.9e-49 197.6 184 66.8
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 1.2e-48 197.2 182 64.8
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 2.0e-48 196.4 174 67.8
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.0e-48 196.4 192 64.6
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 3.4e-48 195.7 147 74.1
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 3.4e-48 195.7 182 65.4
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 5.8e-48 194.9 182 65.4
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 5.8e-48 194.9 182 65.4
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 1.3e-47 193.7 181 64.1
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 1.7e-47 193.4 195 63.1
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 1.7e-47 193.4 171 68.4
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 2.2e-47 193.0 183 65.0
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 2.9e-47 192.6 182 65.4
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 3.7e-47 192.2 183 65.0
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 4.9e-47 191.8 176 64.8
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 4.9e-47 191.8 179 63.7
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 8.3e-47 191.0 170 67.1
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 1.4e-46 190.3 182 65.4
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 2.4e-46 189.5 181 65.2
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 2.4e-46 189.5 181 65.2
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 3.2e-46 189.1 182 65.4
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 3.2e-46 189.1 178 65.2
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 3.2e-46 189.1 188 63.8
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 4.1e-46 188.7 193 63.7
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 7.1e-46 188.0 177 66.1
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 1.2e-45 187.2 180 64.4
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 1.2e-45 187.2 182 62.6
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 1.6e-45 186.8 180 64.4
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 2.1e-45 186.4 187 63.6
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 2.1e-45 186.4 183 66.1
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 2.1e-45 186.4 187 63.6
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 2.1e-45 186.4 180 65.6
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 2.1e-45 186.4 180 65.6
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 2.7e-45 186.0 177 66.1
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 4.6e-45 185.3 177 63.3
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 7.8e-45 184.5 184 62.0
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 1.0e-44 184.1 145 73.8
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 1.3e-44 183.7 180 62.8
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 1.7e-44 183.3 184 65.2
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 2.3e-44 183.0 175 64.6
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 2.3e-44 183.0 187 62.6
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 3.0e-44 182.6 112 87.5
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 5.1e-44 181.8 187 62.0
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 5.1e-44 181.8 138 73.2
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 1.5e-43 180.3 184 62.5
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 1.5e-43 180.3 167 63.5
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 1.5e-43 180.3 178 61.2
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 1.9e-43 179.9 220 55.9
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 2.5e-43 179.5 194 59.8
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.5e-43 179.5 182 63.7
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 2.5e-43 179.5 181 60.8
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 2.5e-43 179.5 182 61.5
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 3.3e-43 179.1 180 62.8
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 7.3e-43 177.9 182 61.5
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 9.5e-43 177.6 184 63.0
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 9.5e-43 177.6 182 61.0
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 9.5e-43 177.6 182 61.0
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 1.2e-42 177.2 180 63.3
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.2e-42 177.2 195 59.0
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 2.1e-42 176.4 182 59.3
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 2.8e-42 176.0 191 60.7
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 6.2e-42 174.9 125 73.6
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 6.2e-42 174.9 125 73.6
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 6.2e-42 174.9 125 73.6
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 8.1e-42 174.5 110 85.5
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 8.1e-42 174.5 197 58.9
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 1.4e-41 173.7 187 58.3
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 4.0e-41 172.2 181 61.9
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 1.2e-40 170.6 182 59.3
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 1.5e-40 170.2 186 57.5
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 7.6e-40 167.9 117 75.2
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 8.4e-39 164.5 190 59.5
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 1.1e-38 164.1 182 58.2
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.4e-38 163.7 119 73.1
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 2.7e-37 159.5 182 56.6
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 2.5e-35 152.9 272 43.0
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 1.1e-33 147.5 180 54.4
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 4.4e-32 142.1 112 69.6
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 8.4e-31 137.9 176 52.8
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 4.2e-30 135.6 165 53.3
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 5.4e-30 135.2 187 48.7
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 6.0e-29 131.7 191 48.2
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 6.2e-26 121.7 101 64.4
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 5.3e-25 118.6 108 61.1
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 1.2e-24 117.5 141 58.2
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 3.4e-24 115.9 165 49.1
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 9.9e-24 114.4 78 73.1
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 3.2e-22 109.4 107 55.1
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 4.2e-22 109.0 350 32.3
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 7.4e-19 98.2 77 66.2
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.2e-16 90.9 70 71.4
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 2.6e-16 89.7 111 58.6
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 4.5e-16 89.0 128 46.1
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 2.3e-12 76.6 91 48.4
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 2.1e-10 70.1 107 54.2
QL11p029078 Quercus lobata HOM05D006014 ORTHO05D013998 4.5e-08 62.4 40 80.0
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 4.5e-08 62.4 117 43.6
Atru.chr2.2408 Acer truncatum HOM05D006014 ORTHO05D007608 2.9e-07 59.7 49 73.5


User provided reference genes

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