Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 0.0e+00 1085.1 621 100.0
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 3.7e-56 223.8 591 37.4
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 5.3e-55 219.9 568 37.7
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 1.4e-42 178.7 577 34.7
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 5.2e-42 176.8 645 33.8
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 5.2e-42 176.8 642 36.0
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.0e-41 174.9 515 35.3
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 7.5e-41 172.9 599 35.2
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 9.8e-41 172.6 638 37.5
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 3.7e-40 170.6 679 34.0
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 3.7e-40 170.6 593 32.5
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 4.9e-40 170.2 548 33.6
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.4e-39 167.9 636 34.7
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 7.0e-39 166.4 428 34.1
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 5.0e-37 160.2 655 33.9
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 8.6e-37 159.5 641 33.9
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 1.5e-36 158.7 695 34.5
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 1.9e-36 158.3 571 32.4
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 3.3e-36 157.5 658 31.0
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 5.6e-36 156.8 600 32.2
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 5.6e-36 156.8 699 32.6
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 1.2e-35 155.6 646 33.7
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 1.6e-35 155.2 553 32.4
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 3.6e-35 154.1 620 31.6
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 8.0e-35 152.9 600 31.8
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 4.0e-34 150.6 497 31.4
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 5.2e-34 150.2 580 32.6
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 1.2e-33 149.1 543 31.5
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 1.7e-32 145.2 557 31.2
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 2.2e-32 144.8 517 31.3
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 1.4e-31 142.1 695 31.5
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 4.1e-31 140.6 602 33.6
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 1.6e-30 138.7 574 33.3
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 2.7e-30 137.9 587 30.5
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 3.5e-30 137.5 545 32.5
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 2.9e-29 134.4 589 31.2
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 1.9e-28 131.7 567 30.0
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 7.3e-28 129.8 550 30.5
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 1.2e-25 122.5 582 28.5
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 1.2e-25 122.5 701 29.8
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 1.5e-25 122.1 627 29.7
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 2.2e-24 118.2 496 30.4
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 1.1e-23 115.9 473 30.0
MELO3C025606.2 Cucumis melo HOM05D007892 ORTHO05D009211 2.4e-23 114.8 552 30.3
Atru.chr2.2419 Acer truncatum HOM05D007892 ORTHO05D009211 7.0e-23 113.2 386 31.1
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 7.0e-23 113.2 565 31.0
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 4.6e-22 110.5 511 29.7
Glyma.13G273900 Glycine max HOM05D007892 ORTHO05D009211 1.7e-21 108.6 611 30.1
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 3.9e-21 107.5 452 28.1
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 1.1e-20 105.9 494 28.9
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 3.3e-20 104.4 541 29.9
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 9.5e-20 102.8 583 29.5
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 1.6e-19 102.1 510 30.0
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 2.1e-19 101.7 472 27.3
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 2.9e-16 91.3 535 28.0
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 3.2e-15 87.8 601 29.0
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 4.1e-15 87.4 463 29.8
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 7.1e-15 86.7 627 27.9
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 9.2e-15 86.3 608 27.8
Ah.06g184550 Amaranthus hybridus HOM05D007892 ORTHO05D009211 1.6e-14 85.5 457 28.2
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 6.6e-13 80.1 621 28.3
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 1.5e-12 79.0 518 27.0
Os07g0107900 Oryza sativa ssp. japonica HOM05D061528 ORTHO05D009211 3.3e-12 77.8 441 25.6
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 7.3e-12 76.6 567 28.2
A02p10690 Brassica napus HOM05D012500 ORTHO05D009211 1.6e-11 75.5 345 25.2
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 1.6e-11 75.5 621 28.2
Psat0s3104g0160 Pisum sativum HOM05D007892 ORTHO05D009211 2.1e-11 75.1 438 27.2
BraA02t06132Z Brassica rapa HOM05D012500 ORTHO05D009211 1.8e-10 72.0 345 24.9
Migut.M00782 Erythranthe guttata HOM05D007892 ORTHO05D009211 2.3e-10 71.6 601 27.6
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 3.1e-10 71.2 415 25.8
C02p17810 Brassica napus HOM05D012500 ORTHO05D009211 5.2e-10 70.5 349 26.4
THA.LOC104799933 Tarenaya hassleriana HOM05D012500 ORTHO05D009211 1.2e-09 69.3 345 29.3
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 1.5e-09 68.9 691 26.9
arahy.Tifrunner.gnm1.ann1.N2Q107 Arachis hypogaea HOM05D007892 ORTHO05D009211 1.5e-09 68.9 125 40.0
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 1.5e-09 68.9 624 27.4
Zm00001eb298400 Zea mays HOM05D061528 ORTHO05D009211 1.5e-09 68.9 371 27.0
BcaC03g14367 Brassica carinata HOM05D012500 ORTHO05D009211 3.4e-09 67.8 346 24.3
BolC2t07910H Brassica oleracea HOM05D012500 ORTHO05D009211 3.4e-09 67.8 347 24.5
CDE05G2993 Ceratophyllum demersum HOM05D007892 ORTHO05D009211 3.4e-09 67.8 51 64.7
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 9.9e-09 66.2 586 26.3
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 9.9e-09 66.2 51 62.7
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 1.9e-07 62.0 597 25.5
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.2e-06 59.3 599 27.4
Carub.0008s1424 Capsella rubella HOM05D012500 ORTHO05D009211 2.7e-06 58.2 414 25.6


User provided reference genes

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