Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01156 Eucalyptus grandis HOM05D001081 ORTHO05D007101 4.1e-113 411.4 203 100.0
Cpa.g.sc3.88 Carica papaya HOM05D001081 ORTHO05D007101 2.0e-59 233.0 125 89.6
PGR083G2221 Punica granatum HOM05D001081 ORTHO05D007101 3.4e-59 232.3 127 89.0
Duzib205G0894 Durio zibethinus HOM05D001081 ORTHO05D007101 3.8e-58 228.8 125 87.2
Duzib068G1165 Durio zibethinus HOM05D001081 ORTHO05D007101 8.4e-58 227.6 125 86.4
Cfa016232 Carpinus fangiana HOM05D001081 ORTHO05D007101 1.1e-57 227.3 125 86.4
QL09p008866 Quercus lobata HOM05D001081 ORTHO05D007101 1.1e-57 227.3 126 86.5
QL09p009112 Quercus lobata HOM05D001081 ORTHO05D007101 1.1e-57 227.3 126 86.5
Gohir.A05G100100 Gossypium hirsutum HOM05D001081 ORTHO05D007101 1.4e-57 226.9 125 85.6
RcHm_v2.0_Chr1g0380551 Rosa chinensis HOM05D001081 ORTHO05D007101 1.9e-57 226.5 125 88.0
Thecc.03G199300 Theobroma cacao HOM05D001081 ORTHO05D007101 1.9e-57 226.5 125 86.4
CiPaw.06G046200 Carya illinoinensis HOM05D001081 ORTHO05D007101 3.2e-57 225.7 125 87.2
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 3.2e-57 225.7 126 85.7
FAN10G3364 Fragaria x ananassa HOM05D001081 ORTHO05D007101 3.2e-57 225.7 125 88.0
FAN10G4231 Fragaria x ananassa HOM05D001081 ORTHO05D007101 3.2e-57 225.7 125 88.0
Nn6g34886 Nelumbo nucifera HOM05D001081 ORTHO05D007101 4.2e-57 225.3 126 84.9
COL.COLO4_16767 Corchorus olitorius HOM05D001081 ORTHO05D007101 5.4e-57 224.9 125 85.6
Gohir.D05G099900 Gossypium hirsutum HOM05D001081 ORTHO05D007101 5.4e-57 224.9 125 84.8
Gorai.009G103900 Gossypium raimondii HOM05D001081 ORTHO05D007101 5.4e-57 224.9 125 84.8
Nn3g16671 Nelumbo nucifera HOM05D001081 ORTHO05D007101 5.4e-57 224.9 126 84.9
CANSAT21G1508 Cannabis sativa HOM05D001081 ORTHO05D007101 7.1e-57 224.6 125 88.0
FvH4_7g31560 Fragaria vesca HOM05D001081 ORTHO05D007101 1.2e-56 223.8 125 87.2
FAN06G0656 Fragaria x ananassa HOM05D001081 ORTHO05D007101 1.2e-56 223.8 125 87.2
VMungo0251G0734 Vigna mungo HOM05D001081 ORTHO05D007101 1.6e-56 223.4 125 84.0
Lj5g0017992 Lotus japonicus HOM05D001081 ORTHO05D007101 4.6e-56 221.9 126 85.7
Sed0012325 Sechium edule HOM05D001081 ORTHO05D007101 6.0e-56 221.5 125 83.2
THA.LOC104798899 Tarenaya hassleriana HOM05D001081 ORTHO05D007101 6.0e-56 221.5 125 84.0
Aqoxy4G03008 Aquilegia oxysepala HOM05D001081 ORTHO05D007101 7.8e-56 221.1 126 84.1
FAN06G3917 Fragaria x ananassa HOM05D001081 ORTHO05D007101 7.8e-56 221.1 125 86.4
Lj4g0009093 Lotus japonicus HOM05D001081 ORTHO05D007101 7.8e-56 221.1 126 84.1
Phvul.003G125501 Phaseolus vulgaris HOM05D001081 ORTHO05D007101 7.8e-56 221.1 125 82.4
Sed0024875 Sechium edule HOM05D001081 ORTHO05D007101 7.8e-56 221.1 125 84.8
Aqoxy3G01434 Aquilegia oxysepala HOM05D001081 ORTHO05D007101 1.0e-55 220.7 126 85.7
Phvul.001G061700 Phaseolus vulgaris HOM05D001081 ORTHO05D007101 1.3e-55 220.3 125 82.4
FAN01G2588 Fragaria x ananassa HOM05D001081 ORTHO05D007101 1.7e-55 219.9 148 77.0
TAR625G0271 Trochodendron aralioides HOM05D001081 ORTHO05D007101 1.7e-55 219.9 126 85.7
Ciclev10022846m.g Citrus clementina HOM05D001081 ORTHO05D007101 2.3e-55 219.5 125 84.0
CsaV3_3G019840 Cucumis sativus L. HOM05D001081 ORTHO05D007101 3.0e-55 219.2 118 88.1
MELO3C008496.2 Cucumis melo HOM05D001081 ORTHO05D007101 3.9e-55 218.8 118 88.1
Cc10_g01340 Coffea canephora HOM05D001081 ORTHO05D007101 5.1e-55 218.4 125 84.8
Lalb_Chr13g0294051 Lupinus albus HOM05D001081 ORTHO05D007101 5.1e-55 218.4 125 81.6
Atru.chr12.2201 Acer truncatum HOM05D001081 ORTHO05D007101 6.6e-55 218.0 126 84.1
GSVIVG01009969001 Vitis vinifera HOM05D001081 ORTHO05D007101 6.6e-55 218.0 127 83.5
Glyma.05G143900 Glycine max HOM05D001081 ORTHO05D007101 1.1e-54 217.2 125 81.6
THA.LOC104823111 Tarenaya hassleriana HOM05D001081 ORTHO05D007101 1.1e-54 217.2 125 82.4
TWI74G0183 Tripterygium wilfordii HOM05D001081 ORTHO05D007101 1.1e-54 217.2 126 81.0
Ca_18157_v3 Cicer arietinum L. HOM05D001081 ORTHO05D007101 1.5e-54 216.9 125 83.2
TPR.G9557 Trifolium pratense HOM05D001081 ORTHO05D007101 2.5e-54 216.1 127 82.7
FAN03G0412 Fragaria x ananassa HOM05D001081 ORTHO05D007101 3.3e-54 215.7 125 84.8
Manes.18G126800 Manihot esculenta HOM05D001081 ORTHO05D007101 4.3e-54 215.3 126 81.7
ECA238G0006 Erigeron canadensis HOM05D001081 ORTHO05D007101 5.6e-54 214.9 124 80.6
Glyma.08G100200 Glycine max HOM05D001081 ORTHO05D007101 7.3e-54 214.5 125 80.0
MD07G1288300 Malus domestica HOM05D001081 ORTHO05D007101 9.6e-54 214.2 125 81.6
Lj4P697T30 Lonicera japonica HOM05D001081 ORTHO05D007101 1.3e-53 213.8 124 79.8
Psat7g080240 Pisum sativum HOM05D001081 ORTHO05D007101 1.3e-53 213.8 125 81.6
Ah.05g173160 Amaranthus hybridus HOM05D001081 ORTHO05D007101 2.1e-53 213.0 124 80.6
HanXRQChr14g0429651 Helianthus annuus HOM05D001081 ORTHO05D007101 2.1e-53 213.0 124 79.8
A01p13390 Brassica napus HOM05D001081 ORTHO05D007101 2.8e-53 212.6 125 80.8
BraA01t01281Z Brassica rapa HOM05D001081 ORTHO05D007101 2.8e-53 212.6 125 80.8
TAR381G1700 Trochodendron aralioides HOM05D001081 ORTHO05D007101 2.8e-53 212.6 127 81.9
unitig_32.g11232 Utricularia gibba HOM05D001081 ORTHO05D007101 2.8e-53 212.6 124 80.6
Carub.0007s1934 Capsella rubella HOM05D001081 ORTHO05D007101 3.6e-53 212.2 125 80.0
Thhalv10026223m.g Eutrema salsugineum HOM05D001081 ORTHO05D007101 3.6e-53 212.2 125 80.8
Potri.015G012700 Populus trichocarpa HOM05D001081 ORTHO05D007101 3.6e-53 212.2 125 80.0
AL7G31700 Arabidopsis lyrata HOM05D001081 ORTHO05D007101 4.8e-53 211.8 125 80.8
Potri.012G015800 Populus trichocarpa HOM05D001081 ORTHO05D007101 4.8e-53 211.8 125 79.2
Sc13g0009920 Simmondsia chinensis HOM05D001081 ORTHO05D007101 6.2e-53 211.5 131 80.2
BcaC09g51172 Brassica carinata HOM05D001081 ORTHO05D007101 8.1e-53 211.1 125 80.8
BcaNung05107 Brassica carinata HOM05D001081 ORTHO05D007101 8.1e-53 211.1 125 80.8
BolC1t01570H Brassica oleracea HOM05D001081 ORTHO05D007101 8.1e-53 211.1 125 80.8
C01p16100 Brassica napus HOM05D001081 ORTHO05D007101 1.4e-52 210.3 125 80.8
CDE05G3015 Ceratophyllum demersum HOM05D001081 ORTHO05D007101 1.4e-52 210.3 126 79.4
AT4G22000 Arabidopsis thaliana HOM05D001081 ORTHO05D007101 1.8e-52 209.9 125 80.0
Sp7g20190 Schrenkiella parvula HOM05D001081 ORTHO05D007101 1.8e-52 209.9 125 80.0
CAN.G411.51 Capsicum annuum HOM05D001081 ORTHO05D007101 2.4e-52 209.5 126 77.0
Hund21005 Selenicereus undatus HOM05D001081 ORTHO05D007101 2.4e-52 209.5 127 78.0
Ah.03g146510 Amaranthus hybridus HOM05D001081 ORTHO05D007101 3.1e-52 209.1 124 79.0
AUR62023429 Chenopodium quinoa HOM05D001081 ORTHO05D007101 4.0e-52 208.8 126 80.2
Medtr8g079498 Medicago truncatula HOM05D001081 ORTHO05D007101 5.3e-52 208.4 126 80.2
Nitab4.5_0004146g0010 Nicotiana tabacum HOM05D001081 ORTHO05D007101 5.3e-52 208.4 124 79.0
PGSC0003DMG401028646 Solanum tuberosum HOM05D001081 ORTHO05D007101 5.3e-52 208.4 124 77.4
PGSC0003DMG402028646 Solanum tuberosum HOM05D001081 ORTHO05D007101 5.3e-52 208.4 124 77.4
SGA_v2.0_scaffold19G08564 Striga asiatica HOM05D001081 ORTHO05D007101 6.9e-52 208.0 124 79.0
AUR62018052 Chenopodium quinoa HOM05D001081 ORTHO05D007101 9.0e-52 207.6 126 79.4
Prupe.2G309800 Prunus persica HOM05D001081 ORTHO05D007101 1.2e-51 207.2 125 80.0
Atru.chr9.478 Acer truncatum HOM05D001081 ORTHO05D007101 2.0e-51 206.5 126 79.4
Nitab4.5_0004513g0030 Nicotiana tabacum HOM05D001081 ORTHO05D007101 2.6e-51 206.1 124 77.4
SGA_v2.0_scaffold25G11207 Striga asiatica HOM05D001081 ORTHO05D007101 2.6e-51 206.1 124 78.2
Aa31LG6G3950 Aethionema arabicum HOM05D001081 ORTHO05D007101 3.4e-51 205.7 125 77.6
PSO541G4732 Papaver somniferum HOM05D001081 ORTHO05D007101 3.4e-51 205.7 126 78.6
PSO675G3624 Papaver somniferum HOM05D001081 ORTHO05D007101 3.4e-51 205.7 126 78.6
Lsat_1_v5_gn_2_7800 Lactuca sativa HOM05D000015 ORTHO05D002445 5.8e-51 204.9 125 77.6
CARHR228810 Cardamine hirsuta HOM05D001081 ORTHO05D007101 7.6e-51 204.5 126 78.6
MSTRG.22347 Avicennia marina HOM05D001081 ORTHO05D007101 9.9e-51 204.1 124 78.2
Peaxi162Scf00071g00017 Petunia axillaris HOM05D001081 ORTHO05D007101 1.3e-50 203.8 124 78.2
SalBow6G0310 Salvia bowleyana HOM05D001081 ORTHO05D007101 1.7e-50 203.4 124 78.2
MBI07_g23667_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D007101 4.9e-50 201.8 129 76.0
EL10Ac1g00785 Beta vulgaris HOM05D001081 ORTHO05D007101 6.4e-50 201.4 124 77.4
SHI02421 Sapria himalayana HOM05D006156 ORTHO05D007101 1.1e-49 200.7 125 73.6
vmacro12512 Vaccinium macrocarpon HOM05D001081 ORTHO05D007101 1.4e-49 200.3 127 74.0
Sopen12g021840 Solanum pennellii HOM05D001081 ORTHO05D007101 5.4e-49 198.4 124 74.2
DCAR_013886 Daucus carota HOM05D001081 ORTHO05D007101 9.3e-49 197.6 124 74.2
Os05g0114600 Oryza sativa ssp. japonica HOM05D001081 ORTHO05D007101 1.2e-48 197.2 124 76.6
Sopen12g021900 Solanum pennellii HOM05D001081 ORTHO05D007101 3.5e-48 195.7 124 73.4
Migut.N03179 Erythranthe guttata HOM05D001081 ORTHO05D007101 1.7e-47 193.4 124 74.2
vmacro07565 Vaccinium macrocarpon HOM05D001081 ORTHO05D007101 1.7e-47 193.4 127 70.9
Zm00001eb355650 Zea mays HOM05D001081 ORTHO05D007101 5.1e-47 191.8 124 76.6
Solyc12g042700.3 Solanum lycopersicum HOM05D001081 ORTHO05D007101 6.6e-47 191.4 135 67.4
HPP92_008968 Vanilla planifolia HOM05D001081 ORTHO05D007101 4.8e-45 185.3 111 75.7
CDE11G0170 Ceratophyllum demersum HOM05D001081 ORTHO05D007101 3.1e-44 182.6 126 74.6
MSTRG.25269 Avicennia marina HOM05D001081 ORTHO05D007101 4.0e-44 182.2 167 56.9
AUR62013725 Chenopodium quinoa HOM05D001081 ORTHO05D007101 5.8e-43 178.3 105 81.9
SEGI_15379 Sequoiadendron giganteum HOM05D001081 ORTHO05D007101 3.5e-40 169.1 125 68.8
ATR1134G096 Amborella trichopoda HOM05D001081 ORTHO05D007101 2.3e-39 166.4 96 79.2
ClCG05G008950 Citrullus lanatus HOM05D001081 ORTHO05D007101 9.6e-38 161.0 85 92.9
BcaB03g11721 Brassica carinata HOM05D001081 ORTHO05D007101 8.1e-37 157.9 103 76.7
Actinidia17007 Actinidia chinensis HOM05D001081 ORTHO05D007101 1.6e-32 143.7 83 75.9
CSS0017659 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 4.6e-32 142.1 82 81.7
Dinv31879 Davidia involucrata HOM05D001081 ORTHO05D007101 1.2e-27 127.5 76 84.2
Mapoly0012s0096 Marchantia polymorpha HOM05D001081 ORTHO05D007101 1.4e-25 120.6 104 59.6
Gorai.006G039100 Gossypium raimondii HOM05D001081 ORTHO05D007101 4.2e-25 119.0 125 54.4
Solyc12g042720.3 Solanum lycopersicum HOM05D001081 ORTHO05D007101 9.3e-25 117.9 76 72.4
SMO356G0374 Selaginella moellendorffii HOM05D001081 ORTHO05D007101 2.7e-24 116.3 86 61.6
Pp3c15_6340 Physcomitrium patens HOM05D001081 ORTHO05D007101 1.5e-22 110.5 89 61.8
Gohir.A09G033580 Gossypium hirsutum HOM05D001081 ORTHO05D007101 3.3e-22 109.4 65 78.5
CSS0023065 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 5.7e-22 108.6 61 85.2
Gohir.D09G034100 Gossypium hirsutum HOM05D001081 ORTHO05D007101 3.7e-21 105.9 65 78.5
CSS0034162 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 3.1e-20 102.8 57 87.7
Nitab4.5_0001077g0030 Nicotiana tabacum HOM05D012963 ORTHO05D007101 5.9e-19 98.6 88 50.0
arahy.Tifrunner.gnm1.ann1.EUX55C Arachis hypogaea HOM05D001081 ORTHO05D007101 1.8e-15 87.0 49 87.8
Zm00001eb266390 Zea mays HOM05D001081 ORTHO05D007101 8.8e-15 84.7 117 48.7
CBR_g8977 Chara braunii HOM05D001081 ORTHO05D007101 5.7e-14 82.0 81 53.1
Nitab4.5_0002544g0090 Nicotiana tabacum HOM05D001081 ORTHO05D007101 2.7e-08 63.2 40 67.5
DCAR_016735 Daucus carota HOM05D001081 ORTHO05D007101 3.6e-08 62.8 59 44.1
Actinidia15449 Actinidia chinensis HOM05D001081 ORTHO05D007101 5.1e-07 58.9 37 67.6


User provided reference genes

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