Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 4.2e-253 877.5 424 100.0
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 4.7e-220 767.7 424 85.1
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 2.6e-218 761.9 424 83.7
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 8.6e-214 746.9 424 81.4
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 5.6e-213 744.2 424 81.1
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 3.6e-212 741.5 424 80.2
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 2.3e-211 738.8 424 80.7
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 3.0e-211 738.4 424 80.7
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 3.0e-211 738.4 424 80.9
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 4.0e-211 738.0 410 82.9
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 5.2e-211 737.6 423 80.4
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.5e-210 736.1 424 80.9
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 3.4e-210 734.9 425 80.7
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 7.5e-210 733.8 425 80.0
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 7.5e-210 733.8 426 78.4
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.7e-209 732.6 411 82.7
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 2.4e-208 728.8 424 80.2
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 7.0e-208 727.2 424 79.0
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 1.0e-206 723.4 425 78.8
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 1.3e-206 723.0 425 78.6
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 1.7e-206 722.6 413 80.1
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 1.7e-206 722.6 427 78.0
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 1.7e-206 722.6 424 77.4
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 5.0e-206 721.1 419 80.2
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.1e-205 719.9 412 81.8
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 9.5e-205 716.8 424 76.7
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 9.5e-205 716.8 424 76.4
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.2e-204 716.5 421 77.9
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 8.0e-204 713.8 424 78.5
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 2.3e-203 712.2 412 80.1
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 4.0e-203 711.4 413 80.1
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 8.9e-203 710.3 424 77.8
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 5.8e-202 707.6 424 77.4
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.3e-201 706.4 424 77.1
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.7e-201 706.1 424 77.1
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 3.7e-201 704.9 419 77.3
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 3.7e-201 704.9 424 76.9
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.3e-201 703.7 419 78.8
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.4e-200 703.0 424 76.9
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.9e-200 702.6 424 76.9
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 3.2e-200 701.8 419 77.1
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 3.2e-200 701.8 425 76.0
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 4.1e-200 701.4 419 77.3
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 9.2e-200 700.3 425 76.5
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 2.0e-199 699.1 424 77.6
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 2.7e-199 698.7 424 76.4
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.7e-199 698.7 424 74.8
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 3.5e-199 698.4 424 76.7
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 4.6e-199 698.0 424 75.9
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 6.0e-199 697.6 424 76.2
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.7e-198 696.0 423 77.3
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 2.3e-198 695.7 415 78.1
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 5.0e-198 694.5 424 75.9
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 1.5e-197 693.0 425 76.0
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.9e-197 692.6 424 75.7
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 2.5e-197 692.2 450 72.9
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 3.3e-197 691.8 421 75.5
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 1.6e-196 689.5 424 75.9
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 4.7e-196 688.0 425 72.9
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 2.6e-194 682.2 422 75.8
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 3.4e-194 681.8 402 78.4
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.3e-193 679.9 419 76.6
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.2e-193 679.1 412 74.3
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 3.7e-193 678.3 424 73.8
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 6.4e-193 677.6 424 72.4
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 4.1e-192 674.9 425 74.4
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 7.1e-192 674.1 425 74.8
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.7e-190 669.5 424 74.3
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 2.3e-190 669.1 424 71.5
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 5.1e-190 667.9 425 73.9
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 2.5e-189 665.6 425 74.1
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 4.3e-189 664.8 540 62.2
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.6e-188 662.9 412 74.0
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.4e-187 659.8 415 75.7
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.6e-186 655.6 387 77.0
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 7.1e-184 647.5 424 69.1
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 2.1e-183 646.0 412 72.6
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 2.7e-183 645.6 424 69.1
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 7.3e-181 637.5 435 69.4
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.4e-179 633.3 413 72.9
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 4.4e-178 628.2 469 65.5
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.9e-176 622.9 409 70.4
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.5e-173 613.2 423 69.3
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 8.1e-172 607.4 422 65.2
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 5.3e-171 604.7 458 65.3
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 1.5e-162 576.6 393 69.5
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 9.3e-160 567.4 414 66.7
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.7e-159 565.8 414 66.7
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 9.0e-155 550.8 364 71.4
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 2.2e-153 546.2 313 79.9
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 8.4e-153 544.3 371 69.8
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 1.6e-148 530.0 387 68.5
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.1e-144 517.3 313 75.4
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 6.9e-139 498.0 424 60.1
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 8.6e-97 358.2 214 75.7
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 5.2e-94 349.0 346 45.7
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 7.5e-93 345.1 204 77.0
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 1.1e-91 341.3 205 77.1
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 1.1e-80 304.7 376 40.2
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 7.3e-80 302.0 345 42.6
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 3.9e-73 279.6 368 37.0
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 5.6e-64 249.2 280 42.5
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 2.8e-47 193.7 106 81.1
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 2.6e-37 160.6 103 70.9
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 2.9e-36 157.1 85 83.5
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 1.9e-35 154.5 106 67.9
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 1.9e-35 154.5 106 67.9
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 9.3e-35 152.1 103 68.0
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 1.4e-30 138.3 139 54.0
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.5e-13 80.5 49 69.4
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.2e-12 77.8 49 67.3
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.8e-12 77.0 50 64.0
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.3e-09 67.8 48 60.4
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 3.0e-09 67.4 44 70.5
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 2.0e-08 64.7 50 58.0


User provided reference genes

Program Settings