Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 5.9e-164 580.9 306 100.0
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.7e-150 536.2 306 91.5
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 3.8e-147 525.0 301 90.4
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 6.5e-147 524.2 306 89.5
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 1.1e-146 523.5 301 90.4
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 1.9e-146 522.7 307 85.7
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 3.6e-145 518.5 308 85.7
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.8e-144 516.2 307 86.3
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 5.2e-144 514.6 307 89.6
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 6.7e-144 514.2 310 87.4
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 6.7e-144 514.2 280 89.6
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 6.7e-144 514.2 303 84.8
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 6.7e-144 514.2 308 85.7
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 8.8e-144 513.8 306 85.9
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.2e-143 513.5 303 85.1
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 1.5e-143 513.1 306 85.0
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 2.0e-143 512.7 309 85.8
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 2.0e-143 512.7 303 85.8
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 2.6e-143 512.3 306 89.2
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 3.3e-143 511.9 303 86.5
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 5.7e-143 511.1 303 84.2
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 5.7e-143 511.1 283 89.4
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 7.5e-143 510.8 303 86.8
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 9.7e-143 510.4 303 84.8
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 9.7e-143 510.4 284 90.1
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 1.3e-142 510.0 281 89.0
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 1.3e-142 510.0 281 89.0
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 1.3e-142 510.0 281 89.0
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.3e-142 510.0 303 86.8
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 2.2e-142 509.2 308 87.0
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 2.8e-142 508.8 303 87.1
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 3.7e-142 508.4 301 84.4
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 3.7e-142 508.4 281 88.6
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 3.7e-142 508.4 306 84.3
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 4.8e-142 508.1 303 84.5
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 6.3e-142 507.7 306 84.0
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 6.3e-142 507.7 300 89.3
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 6.3e-142 507.7 298 88.6
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 8.2e-142 507.3 303 84.5
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 1.1e-141 506.9 303 83.5
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 1.1e-141 506.9 303 83.8
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 1.1e-141 506.9 303 83.5
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.4e-141 506.5 306 85.6
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.4e-141 506.5 305 85.6
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 2.4e-141 505.8 283 89.0
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 4.1e-141 505.0 279 88.5
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 7.0e-141 504.2 281 87.5
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 7.0e-141 504.2 280 88.6
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 1.2e-140 503.4 303 82.5
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.2e-140 503.4 304 85.2
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 1.2e-140 503.4 280 88.2
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 1.6e-140 503.1 303 85.1
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 2.0e-140 502.7 303 82.8
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 2.7e-140 502.3 303 83.2
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 2.7e-140 502.3 303 83.5
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 3.5e-140 501.9 280 87.5
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 1.0e-139 500.4 303 82.8
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 1.0e-139 500.4 282 87.9
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 1.3e-139 500.0 303 84.2
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 3.8e-139 498.4 303 82.8
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 3.8e-139 498.4 304 85.9
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 6.5e-139 497.7 284 87.7
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 8.5e-139 497.3 296 84.1
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 1.1e-138 496.9 303 83.8
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 1.1e-138 496.9 280 87.9
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.1e-138 496.9 310 81.9
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 1.5e-138 496.5 303 87.1
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 1.5e-138 496.5 304 87.2
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.5e-138 495.7 283 86.6
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.5e-138 495.7 303 82.5
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.2e-138 495.4 283 86.6
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 4.2e-138 495.0 303 83.8
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 5.5e-138 494.6 303 83.2
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 5.5e-138 494.6 303 86.1
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 9.4e-138 493.8 308 80.8
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 1.6e-137 493.0 276 87.3
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 2.1e-137 492.7 303 84.5
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 4.7e-137 491.5 305 82.3
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 1.0e-136 490.3 307 80.8
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.4e-136 490.0 308 80.8
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 1.8e-136 489.6 306 82.0
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 5.2e-136 488.0 303 83.2
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 4.4e-135 485.0 306 81.0
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 9.8e-135 483.8 303 81.8
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.7e-134 483.0 308 79.9
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.8e-134 482.3 282 85.8
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 3.7e-134 481.9 305 83.3
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 4.8e-134 481.5 315 79.7
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 8.3e-134 480.7 280 85.0
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 1.8e-133 479.6 282 84.4
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 4.1e-133 478.4 316 79.1
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 5.4e-133 478.0 388 71.1
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 7.0e-133 477.6 265 88.7
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 7.0e-133 477.6 283 84.8
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 2.7e-132 475.7 309 80.6
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 2.7e-132 475.7 283 84.5
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 5.9e-132 474.6 306 85.0
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 7.7e-132 474.2 283 84.1
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.0e-131 473.8 310 78.7
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 1.3e-131 473.4 304 78.9
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 1.1e-130 470.3 278 84.9
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.5e-130 469.9 282 83.0
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.5e-130 469.9 308 79.5
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 2.5e-130 469.2 304 77.3
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 3.3e-130 468.8 301 79.4
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.4e-128 463.4 281 82.6
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 1.4e-128 463.4 284 82.7
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 1.8e-128 463.0 283 83.4
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 6.8e-128 461.1 279 82.8
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 8.9e-128 460.7 284 83.1
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 3.4e-127 458.8 284 82.0
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 1.3e-126 456.8 332 75.0
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 1.4e-125 453.4 302 77.5
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 3.1e-125 452.2 281 80.4
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 7.0e-125 451.1 279 82.1
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 3.8e-123 445.3 281 79.0
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 5.0e-123 444.9 282 80.1
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 6.6e-123 444.5 277 84.1
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 8.6e-123 444.1 308 74.0
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 1.5e-122 443.4 280 79.6
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 4.7e-121 438.3 273 80.6
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 4.0e-120 435.3 295 75.6
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 4.9e-118 428.3 221 94.6
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 3.5e-116 422.2 244 85.2
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 3.9e-115 418.7 221 91.4
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 6.6e-115 417.9 280 77.5
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 5.6e-114 414.8 253 82.6
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 8.9e-112 407.5 218 91.7
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 8.9e-112 407.5 218 91.7
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 7.0e-109 397.9 278 70.1
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 3.3e-106 389.0 250 75.6
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 4.0e-104 382.1 251 74.5
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 6.8e-104 381.3 250 73.2
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 1.5e-103 380.2 215 87.0
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.9e-102 375.9 314 66.2
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 1.9e-101 373.2 200 91.5
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 1.3e-99 367.1 253 69.6
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 4.7e-97 358.6 215 84.7
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 7.8e-92 341.3 182 92.9
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 2.3e-91 339.7 182 91.8
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 4.3e-90 335.5 208 82.7
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.4e-85 320.5 221 79.6
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 6.6e-83 311.6 174 88.5
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 4.5e-79 298.9 184 80.4
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 8.1e-73 278.1 152 90.1
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 2.5e-66 256.5 194 68.0
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 2.4e-64 250.0 146 84.2
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 1.9e-61 240.4 209 64.1
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 2.4e-48 196.8 119 76.5
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 4.5e-47 192.6 242 47.5
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 5.5e-45 185.7 158 63.3
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 5.5e-45 185.7 177 59.3
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 2.1e-44 183.7 136 71.3
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 3.7e-41 172.9 105 77.1
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 8.5e-38 161.8 86 88.4
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 1.8e-35 154.1 96 75.0
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.2e-31 141.4 88 78.4
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 3.8e-30 136.3 305 32.5
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 3.2e-29 133.3 196 45.4
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 1.2e-28 131.3 102 68.6
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 1.0e-27 128.3 171 44.4
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 9.8e-26 121.7 66 90.9
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 9.8e-26 121.7 66 90.9
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 2.6e-18 97.1 87 78.2
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 2.6e-18 97.1 87 78.2
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 1.3e-17 94.7 53 83.0
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 9.1e-16 88.6 158 39.2
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 3.5e-15 86.7 79 58.2
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-15 86.7 85 55.3
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 1.7e-14 84.3 85 69.4
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 1.6e-12 77.8 92 50.0
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 4.0e-11 73.2 110 41.8
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 6.8e-11 72.4 103 43.7
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 1.5e-10 71.2 59 64.4
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 2.0e-10 70.9 62 59.7
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 3.7e-09 66.6 43 79.1
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 8.3e-09 65.5 57 56.1
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.6e-07 61.2 34 82.4
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 2.0e-07 60.8 42 73.8
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 2.3e-06 57.4 38 73.7
Solyc04g079010.1 Solanum lycopersicum HOM05D003815 ORTHO05D004580 6.6e-06 55.8 31 74.2


User provided reference genes

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