Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 3.2e-107 391.7 192 100.0
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.2e-85 320.1 221 79.6
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 4.6e-82 308.1 221 75.6
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 4.6e-82 308.1 220 76.4
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 1.3e-81 306.6 220 76.4
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.8e-81 306.2 221 74.7
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 2.3e-81 305.8 221 76.5
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 3.9e-81 305.1 221 75.6
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 5.1e-81 304.7 221 74.7
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 6.7e-81 304.3 221 73.8
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 8.7e-81 303.9 221 74.7
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 8.7e-81 303.9 221 74.2
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.9e-80 302.8 221 74.7
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 1.9e-80 302.8 221 74.7
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 1.9e-80 302.8 221 75.1
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 2.5e-80 302.4 221 75.1
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 2.5e-80 302.4 221 75.1
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 2.5e-80 302.4 221 75.1
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 4.3e-80 301.6 221 74.7
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 5.6e-80 301.2 221 73.3
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 5.6e-80 301.2 221 73.3
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 5.6e-80 301.2 221 72.9
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 7.4e-80 300.8 221 74.2
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 7.4e-80 300.8 221 73.3
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 9.6e-80 300.4 221 74.2
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 9.6e-80 300.4 221 74.7
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.6e-79 299.7 221 73.8
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 2.1e-79 299.3 221 74.7
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 2.1e-79 299.3 221 73.8
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 3.7e-79 298.5 206 77.7
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 6.2e-79 297.7 221 73.8
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 8.1e-79 297.4 215 75.3
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 8.1e-79 297.4 218 74.3
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 8.1e-79 297.4 221 72.4
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 8.1e-79 297.4 221 73.3
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 8.1e-79 297.4 221 73.3
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.4e-78 296.6 221 73.3
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 1.8e-78 296.2 221 73.8
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 2.4e-78 295.8 221 72.9
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 2.4e-78 295.8 221 72.9
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.4e-78 295.8 221 72.4
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 3.1e-78 295.4 221 72.9
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 4.0e-78 295.0 221 72.9
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 4.0e-78 295.0 221 72.4
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 4.0e-78 295.0 221 73.3
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 4.0e-78 295.0 219 72.1
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 6.9e-78 294.3 221 71.9
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 6.9e-78 294.3 221 73.3
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 6.9e-78 294.3 221 73.3
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 6.9e-78 294.3 221 73.8
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 6.9e-78 294.3 221 74.2
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 6.9e-78 294.3 221 72.4
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 9.0e-78 293.9 221 72.4
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 1.2e-77 293.5 219 72.6
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 1.2e-77 293.5 219 72.6
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 1.2e-77 293.5 219 72.6
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 1.2e-77 293.5 219 72.6
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 1.2e-77 293.5 219 72.6
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 1.2e-77 293.5 219 73.1
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 1.5e-77 293.1 219 73.1
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 2.0e-77 292.7 221 71.9
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 2.0e-77 292.7 221 72.4
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 2.0e-77 292.7 221 74.2
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 2.0e-77 292.7 221 72.4
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.0e-77 292.7 221 72.4
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 2.0e-77 292.7 221 71.5
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 2.6e-77 292.4 219 72.1
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 3.4e-77 292.0 221 72.4
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 3.4e-77 292.0 221 71.5
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 4.5e-77 291.6 221 72.9
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 4.5e-77 291.6 221 72.9
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 5.8e-77 291.2 221 71.5
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 7.6e-77 290.8 221 71.5
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 9.9e-77 290.4 219 71.7
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 9.9e-77 290.4 221 71.9
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 9.9e-77 290.4 219 71.7
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.3e-76 290.0 221 71.9
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 1.7e-76 289.7 221 73.8
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 1.7e-76 289.7 221 72.9
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.2e-76 289.3 221 72.4
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 2.2e-76 289.3 219 71.2
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.2e-76 289.3 221 71.5
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 3.8e-76 288.5 221 72.4
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 3.8e-76 288.5 221 72.9
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 4.9e-76 288.1 221 71.9
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 4.9e-76 288.1 221 71.0
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 6.4e-76 287.7 218 72.9
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 6.4e-76 287.7 218 72.9
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 6.4e-76 287.7 221 72.4
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 6.4e-76 287.7 221 70.6
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 8.4e-76 287.3 221 71.9
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 1.1e-75 287.0 221 71.9
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 1.4e-75 286.6 221 70.6
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 2.4e-75 285.8 221 71.0
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 2.4e-75 285.8 221 70.6
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 4.2e-75 285.0 231 69.7
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.5e-75 284.6 221 69.7
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.5e-75 284.6 221 69.7
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 7.1e-75 284.3 221 69.7
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 9.3e-75 283.9 221 69.7
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 2.1e-74 282.7 219 71.2
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 2.1e-74 282.7 219 71.2
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 3.5e-74 282.0 196 75.0
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.5e-74 282.0 221 68.8
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 7.9e-74 280.8 196 75.5
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 7.9e-74 280.8 220 71.4
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 1.8e-73 279.6 204 76.5
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 1.8e-73 279.6 226 68.1
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 1.8e-73 279.6 221 70.6
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 1.8e-73 279.6 190 76.8
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 3.0e-73 278.9 221 69.7
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 3.0e-73 278.9 221 68.8
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 8.7e-73 277.3 219 68.9
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 1.5e-72 276.6 214 71.0
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.5e-72 276.6 221 70.1
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.5e-72 275.8 192 75.0
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 2.5e-72 275.8 221 69.2
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 3.3e-72 275.4 221 68.3
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 1.3e-71 273.5 248 63.7
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 4.8e-71 271.6 221 70.1
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 6.9e-70 267.7 192 72.9
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 2.0e-69 266.2 182 75.8
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 2.0e-69 266.2 219 66.7
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 4.5e-69 265.0 190 74.7
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 2.9e-68 262.3 212 69.8
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 3.8e-68 261.9 200 72.5
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 2.5e-67 259.2 221 68.8
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 3.2e-67 258.8 234 65.0
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 1.2e-66 256.9 205 69.3
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.6e-66 256.5 214 66.4
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 2.7e-66 255.8 200 71.5
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 1.6e-63 246.5 196 66.3
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 3.7e-63 245.4 196 65.3
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 8.2e-63 244.2 196 64.8
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 2.0e-61 239.6 197 64.0
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 1.3e-60 236.9 208 65.4
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 1.2e-58 230.3 196 62.8
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 4.6e-58 228.4 221 62.9
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 6.1e-58 228.0 182 71.4
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 2.3e-57 226.1 182 70.9
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.8e-54 216.5 206 62.1
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 1.9e-51 206.5 153 69.9
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 2.3e-49 199.5 174 66.7
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 6.7e-49 198.0 152 72.4
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 5.0e-44 181.8 209 52.6
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 6.5e-44 181.4 120 75.0
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 1.8e-38 163.3 159 56.0
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 5.0e-36 155.2 146 63.0
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 2.5e-35 152.9 86 83.7
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 5.9e-29 131.7 119 58.0
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 7.7e-29 131.3 182 47.8
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 7.2e-27 124.8 163 47.9
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 2.4e-22 109.8 105 56.2
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 1.6e-21 107.1 133 53.4
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 1.6e-21 107.1 133 53.4
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 1.4e-17 94.0 95 53.7
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 1.4e-17 94.0 83 62.7
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 1.3e-15 87.4 45 88.9
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 1.8e-14 83.6 139 43.2
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.1e-14 82.8 47 83.0
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 1.6e-13 80.5 65 67.7
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 1.6e-13 80.5 65 67.7
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 1.6e-13 80.5 79 54.4
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 8.6e-12 74.7 82 52.4
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 4.3e-11 72.4 145 32.4
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 4.9e-07 58.9 43 74.4
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 4.9e-07 58.9 57 50.9


User provided reference genes

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